SelenoDB
Release 2.0
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Transcript Report for SPT00000541_2.0
Identity
TranscriptIodothyronine deiodinase (DI)
SpeciesCiona intestinalis (Sea Squirt)
Transcript IDSPT00000541
Transcript release2.0
External IDNone
Gene SPG00000444_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00000541_2.0 # Transcript # Iodothyronine deiodinase  (DI) # Sea Squirt (Ciona intestinalis) # Full length # Forward
AGGTTGTTGGACGTTATGAAGCAAGGTCGGCCACTTGTGGTCAACTTTGGTTCATGCTCC
TGACCCCCTTTTATGGGGGCTCTGAAATATTTTGCTGCAGTTGTGGAAGAATTTAAAGAC
AGAGCTGATTTTATAACAATTTATATTGAAGAGATACATGCTGCGGATGGCTGGAGCTTT
GAATCAAGCAGGTTAATTTTTAACCTCTAATTTAGCTACACCTATATACATGCTTTATAT
GATAAATGCTGGTTTGTGCTGGTTTGTAGGCTAGTAAGTAAGCTGGTGGTTGAAAAGTGT
TCACACTCTATTCTTTCCCCAATTCTCAACGTGATAGCGATATCGCATTGTGGGGTAAGA
TGAGATACCTTCAGCGCATATAGTCCCATGTTTTGTATTCGTGTATTTAATAAGAATTAG
CGACGGTCTTTGAATATTTTTGTTTACCATAGCACCAAACGAAACGATTAAAGAGAATGA
AAACCAGTTTCCTCTTACTGATACCATAGTTTAGACTTAAGGGTTACAAATAAACCTCTG
TGAATTTGTTGTTCTTGCAGGTTCAATTTTAAAACGCACAAAACACTACAAGACAGGTTC
TACGCTGCTTCCATTTTCAAATCCGAATTTGATTGCAACGAATGTGCTTTGTTCGTCGAC
TCGATTTCAAACGAAGCCAATTTTGCTTACGGTGGATTGCCGGAACGTCTTGCTATAATT
AAAAACGGAAGGATTCATTACATTGGTGGTATTGGTCCAATGATGTATGATATAACAGAA
ATGAAGAAAAGTTTAAACGAAGCGCTTAATTTACCTTATTAGTTATTTAGGCGGTTATTG
TTCCAAATGACAAACTGTAATTGTAAAACAACATTTCCTTTGTTCTTATTCTAATGTAAT
TGCTTTGAAAGGTAAAGTTTATATTCGCATATATGACGAAATGCTTTGAAAGTTTCCTGA
AGTGTTTTTGATTTTCTTCGCGAATTGC
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