SelenoDB
Release 2.0
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Transcript Report for SPT00000552_2.0
Identity
Transcript15 kDa selenoprotein (Sel15)
SpeciesCiona intestinalis (Sea Squirt)
Transcript IDSPT00000552
Transcript release2.0
External IDNone
Gene SPG00000456_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00000552_2.0 # Transcript # 15 kDa selenoprotein (Sel15) # Sea Squirt (Ciona intestinalis) # Full length # Forward
GCATCATTGTCGGCACAGGAATGCGCAGATCTTGGGTTTAGCTCCGAGTTAATGTGTGGC
TCGTGTAGTTTGTTGCCCAAGTTTAACCTTACAATGCTGGAAGATGATTGTAAAAAGTGT
TGCCAGTCAGAAGTGGAAGAAGATACTGCAAAGGTAACTTGGCTATGTGGGAGACAGTTG
CAATATATATTGAGAAACACCAGTTATAGAATATGCTATAAAGTAGGGTAGTGGTTCCCT
ACCTTTCATGGTTTGTGGCCCCTTTCAGAGACACTTAAAAACTGTGACCCCCTACTCCAT
CAATAAAATAACCTACATTTGTTTAAACATATATACACCTGTTATTTTATTCATAACTTT
GCAGCAATTGGCCTCTAAAAAATAGAAGGCCATGAGCAGGCAGATCCCATTACACCAGCA
GCAACAACACATAAATATGTTTTACTAACACTGGCACACTGCTAACTTTTAGTACCATGG
CGCCATACTTGAAATCTGTGTTTGAGTTTTACCCAATTACCCCCAAATTGACGGTAACTA
TGTCAGTAGATATTAGTTATAACTGTAGTGGTGGTAGAAATATTATGGGTTCATGGTGGT
TGTTTTAACAGCGTTTTCATTCTGCCATTCTTGAAGTGTGTGGGTGAAAGATTGGACGCT
ACCCCCAAGTCCAAGGTGCTTAGAAGTAGATTAATTGAAACATGGCATACATGTGCCTGT
AGCTACAACTAAGCTGGTATTTGTAGATAGTAATCAATATATATATAGTTACATACCTCA
TACTTACTGTCTATAAGTAAAAGATATATAAGTTGCTCATTCTTAAATGAAAAAAAATCC
CTAAAATTAGTATAAATACCTGGTAATTGAATAAGAAAGAGGAATAGTTAGTTTTGTAAC
TTTCCTAACATTTTCATCTTGTTCAGCTTTCGTCAAGGGAGAGAAATCCAGAGCTTTCTC
CAATTTGAAAATTAAGGTAAAATCTTTTTATAAGTTACATCATTACAGTGTTTCCACCTG
AAAAACTTCATACGGCCAAAGTTTTCATTAAAAAAACTCAATAACCAGATTTTCTGTTAT
CACAGTACGTTCGTGGAGCAGACCCAGTTATTAAACTACTAAACGAGGATGAACAAGTCC
AAGACACACTCAGCATCACAAAGTGGAATACTGACAGTGTAGAAGAATTCTTGAACGAAA
AATTAATCAGAGTTTAAATAGAAGAATGTAACTGTATCACATTTCATTATTTAGTTAAAA
CGCTTTGGACTCTACATTGAGATTCAATCATGTTTCGCAGTTTTGTTTTTGTAAAATATT
TGTTTCCTTATTTTTCTTGTATATTTGTTTTCATAATCAGTTGATTTGACCTTTAGTAAC
CTTTGGGGGAAGGTGAAAGGTCATATGTTTCCGGGGTCATGACCCCTTGATGCCAAACTT
ATGAAGGAACTTCGTTAAACCTCGACAAGGATCAAAGTTTCCGATGTTATTGGTGTTTGA
CAAC
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