SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00000560_2.0
Identity
TranscriptSelenoprotein S (SelS)
SpeciesCiona intestinalis (Sea Squirt)
Transcript IDSPT00000560
Transcript release2.0
External IDNone
Gene SPG00000464_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000560_2.0 # Transcript # Selenoprotein S (SelS) # Sea Squirt (Ciona intestinalis) # Full length # Reverse
CACGATATAGTGATGTAACATCAATAAACGACGAAGCGTTGATGCTCTTTACGTCGTTTA
CGTCATACCAAACCCACGCCATGCAAAGGCAGCGTGGGTTTACATCTGTCGTTGTAAAGG
CGTCATACACGCGTCGGTGGAAGAAAACAAAGTCACTTAAATGTAAAGTGTACAGTTGGT
CCCAAACCACCATGACGCGTGCAAAGTTAACCTCATCCTCCAGCAGAAGGACGACTGTTG
CCTGGTCGCCATCGCGCAGAATTAGAAGGCCCACCGCCTAAAGGACTGAAATCTACAAAT
AAAAAGCAGAAGTTAAAAATTTTGTAGCCTGCTTATAAGTTACCACATATGTAACTGCAA
TTATTTTAGGAGATTTTTTTTAATGTATGGCTGACAATTTTGACAACGCATAAGGGGCCA
CTGGGTTGAAGCAATCACTGTTATGTTTCACCAAATCCAAACACAACTTACCACTTGATC
TTAAAGGCTTGGATTCTTTATTTCTCTTAATATGTGACTGTGTAGCTTGGTTGGGGTCTG
GTTTCTTTAGGAAAAAAAGTTATTAAAAGTTAACTATGGCAGCAGGAAAAGAATAATGAG
CAGACATTAAAAGTCGTTCAGTGCCGACATTAAGACAGCACCATTCAATTTCAGAACTGG
TGAACTTGTTTAGTTCATAGAACTGTTTATCAACTCTTGCAACCCTTGAATTTAACATAG
CAATAATAACCAGTTAACGAACAGGTACAATATAAAGGTATTTACCTGATCTAACTTCTT
AGAAGTCTTTGATTGAGTTTTCCCAGCTTTAAGAGCATCATGGTCATTTATCTTCTGCAT
TCTTTTTTGCTCTTCTTGCTGTGAGTTTAAAATAAATTCCATAAATTCAGATAACAGTTG
GCAAGTCGGCCAAAATTAAGAGTATATATATAAATAAAATGAATGTTTGAAAGTTATAAG
TTATAACACTTATGAAATATACATACATGAGATTACAGTAAAGAAAAGTTTATTATGTTA
ATATGTTATTACTGCATGGAAACAGAGACAACATTGTTTTACCATTACTACCAACATTTT
CGCTTTTCTAAACTCTTCTGTTCTATGTTATAGTGAACAAAGAGACAAAATAAAGACCCT
TGTCTTCTCATAAGATGTTGTCTTAAGATACAGGCTTTGATTTCAGTGATATAAAGCTGC
AATGGTATCAGTATAAAGTCACCACAAATACTTCACCTCTCTCAATCTTTCCTCGTGCTC
GCGTGCAGCAGCATCATGCCTGTCTTGCAACTTTTTACGAGCGCGTTCCATTGCAACACT
ACGTGCTTCCACTTGCTCTGGAGCTAATAGGAAACATTAGAATGTAACTTGCTTTATCAT
CAGGTTGCCAAAAACGACCGTCATTTACAAGTTGTCATGAATGTGACTTTGTGTATTTTG
TTTTAATTTTAACATGTATTTATTTAATACAAATATATTGAATATCAAATATTATTAAAA
AATGTGTGTTTTAAAGACCAAAAATGTTACTGGTCTTTGGTTATCTGGTTTTGGTGCAAA
TATTATTGCATTTTACATTTCAAATGATATTTAAATTGTATTTTACAGACCAAAAATTTT
ACTGGTCACCAGCTTAAGGACTGTCGATTAGTGGATTACTACTTACTCATGTTTTCTGTG
TCATCATAATATGTCTTCCTGCGACCAAACAAATTCTTGACTGATTTTTCAATATTTGTC
CAAACAAACATGGCTGCAACAAAGCCAAACAACAAGAACCAGCCATAAGCTTGTAGGAAT
GCTAAACCTGGGGAAAACATAGCAATTGTGAAAATGTCAGTACTTATTAATTTATTATAC
AACACAGTAATTATGAAAATAAGACTTGCTATTTTCAAAATCCATAAATACTAAGTTGAA
GTTTAGTGTAAAATGTAGAGGGTGCATTCTTTACTATCACCCACGAATCTTGTATTTTTA
TACAGGGAAAAATACATTCAGGTTCAATAGAAAGCAAATGATAACAGTTAGATTTTCTAC
TGTTTTGATGATAACAGCAAATGATAACAATAAATTTCTACTGTTTTGAAACAAAAATTG
CACACAACATTAAAAATACTCAACTACAAATAAAAAACATGTTCACCTTGGTTAAAAACC
GACATCATGACGTACGGGTTTTCATTTATTAAAGGTCCTTGGTTCCCTGCACTTCCAGCA
GTATTCGGATCTCCGGGAGCTTCTAAAATGTCCTCGTCCAT
Chart Advanced