SelenoDB
Release 2.0
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Transcript Report for SPT00000561_2.0
Identity
TranscriptSelenoprotein T (SelT)
SpeciesCiona intestinalis (Sea Squirt)
Transcript IDSPT00000561
Transcript release2.0
External IDNone
Gene SPG00000465_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000561_2.0 # Transcript # Selenoprotein T (SelT) # Sea Squirt (Ciona intestinalis) # Full length # Forward
GTGGAAGTTGAAGCTGGCAGTGCAAGTGAAGATGCTCCTATACCAAAACTGAAAAACCAG
TTCACTGTACCAGTGGTCAAGTTTCTTATCTGCCAATCCTGAGGTTACCGTCGTGCCTTC
GAAGAATATGCGCAGATTATTAATCAGCGCTATTCGGAGGTACGCATTGATGGGGGAAAC
TACCCACCCCCTAAGTTTAACCAAATGGCTGCTATGGTATTGTCTGTAATTAAGTTTATG
TTGATTGGTTGTATTCTCACTGGTGTCAACCCGTTCGAAAAAGTTGGCATGGAAACACCT
CAGATTTATCACTGGGCGCGTGAAAATATGATTTACGCTTGCATAATGTTGTTCTTTTTC
TCCAACGCCATTGAAACTCAACTCACATCTACTGGTGCGTTTGAAATATTACTAAATGAC
GTCACAATCTGGTCAAAGCTGAAATCAGGAAGAGTGCCCCGTGTGGACGAATTGATGCAA
ATAATCGACTCCCAAATAAACGTCGGAAAAATGAATCCTACGGACAACTTTGTGCAATCA
TAAACTGAAGATGGTGTTTCGAAACTTTTCAACTTTAGCAATAGTTGTTAAAAAACTATG
TGGTGTTGGTGTCATTAGCTGGCATTAATCATTTCAACTTCTAACAGATGTTTTAAGATT
CGAAATAGAAAGGTCATGGAATTTTACAGGATTTCATTTAAAAAATAAAAACTGCAAACT
GTCATTTCACATTTATATATATTTTGTTAATTTGTTTTATTTGTTAATCTTATGTCCTCA
TTGGTATGTGATTTTTTTCCATTTATTGCATTGTGTCTTCATAGTTTATTTATGATTCAC
TATTCAGATATTATACATGGGTTTAGGCAAATTTGTAGTACGGTAGCAGGAGCTGGTACT
TTCGTGAACATTTCTGTTGTGGGATTTTAATCAAATTTATGATGGTTTTATGTCGAAAGT
TGAATGACTGACATAAACTTGATGTAGCTTATTGGGTAGA
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