SelenoDB
Release 2.0
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Transcript Report for SPT00000561_2.0
Identity
TranscriptSelenoprotein T (SelT)
SpeciesCiona intestinalis (Sea Squirt)
Transcript IDSPT00000561
Transcript release2.0
External IDNone
Gene SPG00000465_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000561_2.0 # Transcript # Selenoprotein T (SelT) # Sea Squirt (Ciona intestinalis) # Full length # Reverse
TCTACCCAATAAGCTACATCAAGTTTATGTCAGTCATTCAACTTTCGACATAAAACCATC
ATAAATTTGATTAAAATCCCACAACAGAAATGTTCACGAAAGTACCAGCTCCTGCTACCG
TACTACAAATTTGCCTAAACCCATGTATAATATCTGAATAGTGAATCATAAATAAACTAT
GAAGACACAATGCAATAAATGGAAAAAAATCACATACCAATGAGGACATAAGATTAACAA
ATAAAACAAATTAACAAAATATATATAAATGTGAAATGACAGTTTGCAGTTTTTATTTTT
TAAATGAAATCCTGTAAAATTCCATGACCTTTCTATTTCGAATCTTAAAACATCTGTTAG
AAGTTGAAATGATTAATGCCAGCTAATGACACCAACACCACATAGTTTTTTAACAACTAT
TGCTAAAGTTGAAAAGTTTCGAAACACCATCTTCAGTTTATGATTGCACAAAGTTGTCCG
TAGGATTCATTTTTCCGACGTTTATTTGGGAGTCGATTATTTGCATCAATTCGTCCACAC
GGGGCACTCTTCCTGATTTCAGCTTTGACCAGATTGTGACGTCATTTAGTAATATTTCAA
ACGCACCAGTAGATGTGAGTTGAGTTTCAATGGCGTTGGAGAAAAAGAACAACATTATGC
AAGCGTAAATCATATTTTCACGCGCCCAGTGATAAATCTGAGGTGTTTCCATGCCAACTT
TTTCGAACGGGTTGACACCAGTGAGAATACAACCAATCAACATAAACTTAATTACAGACA
ATACCATAGCAGCCATTTGGTTAAACTTAGGGGGTGGGTAGTTTCCCCCATCAATGCGTA
CCTCCGAATAGCGCTGATTAATAATCTGCGCATATTCTTCGAAGGCACGACGGTAACCTC
AGGATTGGCAGATAAGAAACTTGACCACTGGTACAGTGAACTGGTTTTTCAGTTTTGGTA
TAGGAGCATCTTCACTTGCACTGCCAGCTTCAACTTCCAC
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