SelenoDB
Release 2.0
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Transcript Report for SPT00000562_2.0
Identity
TranscriptSelenoprotein U2 (SelU2)
SpeciesCiona intestinalis (Sea Squirt)
Transcript IDSPT00000562
Transcript release2.0
External IDNone
Gene SPG00000466_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000562_2.0 # Transcript # Selenoprotein U2 (SelU2) # Sea Squirt (Ciona intestinalis) # Full length # Forward
ATTTCTATTCAGCACTTCATTGATTATGTTGCCAAAGAATATGTTGAAGATTTTTCCAAA
ATATTCCCGCGTCACTTAGAAGTAAGTTAAATAACTTATGTATAAGTATTGCCTGTATAA
TACTATACAAGCAGTAATCGTAGGCGGCAAACCTGGGGTGGCAGGGTGGGCAGAGGTACT
CTAGAGTTGCATTGCATTATTCACTACACAATAGAAACCAAATTTGTCCCATAGGCATGC
ACGTCTAACTATCCCTGTTTCCTGCGCATTTTAAAAAGTTGCTGCCTATACAAACTATAG
CTGTCAATGCCATACATTGCTGATAAATTAAAACTCTTTTTATATTAAATTTTAGGGCAG
CAATGTAAAAATCATTGTGATTGGTTGTGCTCCATCGCGCTTCATTGCTCCTTTCTGTGA
TGAAACCAATTTTGAACATTCAATGTTTTGTGATTCCAAACGGATCATCCATAAATGTCT
TGGACTTTACGATTATCCACAAAACTCATTGTCCAGTAAGTTTAACTGTGTCTGTGTATG
GCTTACACAGCTTTTCTATTCGTTTGCAAAGTTCACATTTAAGCACGTTTAAGCATGTGT
GTGATTTTTACTAGGTCCATATTCACATACTTTATTAAGTCTACAATATAGTTCGGACCC
CATCCGCAACACCCAATGTGTTATGAACTAAGCTTCGTGACAATGTTTTGCCTAATTACA
TATTTTATAACCACGTATGTTTTAAATGTATTTGGTCTGCCATGTAATGATGAATAAGTG
TCATTAAATTATTAAATTGACAGTTGTGCAATTTATCTTTATTTACAGATGAGGTTAGTC
CCCATGTAAAATCAACCGCATTTTCTGGCTTTTTCCGAACCGTTTGGAGAGGAATAAAAA
GTCAGGTTGAACAGGGAGATTCTTTACAACAAGGGGGACAACTTATTATCGACCAAGGTA
AAAACACATCACTGTCTAAATACATGGTTTCAGTTAATGGGATCTTGGTAATTTATTTTG
AAATGCTAGTTATTGACTGTTAGATTATCTGTAATATGCTTTAATAAATGTGTCAACAGA
ATTCCCACGTTACTTATAACGAATGTCGTTGTCCGCCCAGGATAAATAAGTCACATTTAT
TCACAATCACTCTCACTGGTAAACTTTAATATATTAGGTGTTGAACGAACATGTAATTTA
AATGTTGGTTAAGGAGTTGTATTCTATTTATGTCAGTTTTATTCAATTGCGTTTTAATTT
TAGTTCCTTTTTTTTAGACGGCAAAATATTATTTTTCCATCGCGACTCCCACCCACTTGA
TCACACACCTATAAACGACCTTCTGCACGCTGCCAATCTGCCAAGGATCGATTTTCTG
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