SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00000562_2.0
Identity
TranscriptSelenoprotein U2 (SelU2)
SpeciesCiona intestinalis (Sea Squirt)
Transcript IDSPT00000562
Transcript release2.0
External IDNone
Gene SPG00000466_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000562_2.0 # Transcript # Selenoprotein U2 (SelU2) # Sea Squirt (Ciona intestinalis) # Full length # Reverse
CAGAAAATCGATCCTTGGCAGATTGGCAGCGTGCAGAAGGTCGTTTATAGGTGTGTGATC
AAGTGGGTGGGAGTCGCGATGGAAAAATAATATTTTGCCGTCTAAAAAAAAGGAACTAAA
ATTAAAACGCAATTGAATAAAACTGACATAAATAGAATACAACTCCTTAACCAACATTTA
AATTACATGTTCGTTCAACACCTAATATATTAAAGTTTACCAGTGAGAGTGATTGTGAAT
AAATGTGACTTATTTATCCTGGGCGGACAACGACATTCGTTATAAGTAACGTGGGAATTC
TGTTGACACATTTATTAAAGCATATTACAGATAATCTAACAGTCAATAACTAGCATTTCA
AAATAAATTACCAAGATCCCATTAACTGAAACCATGTATTTAGACAGTGATGTGTTTTTA
CCTTGGTCGATAATAAGTTGTCCCCCTTGTTGTAAAGAATCTCCCTGTTCAACCTGACTT
TTTATTCCTCTCCAAACGGTTCGGAAAAAGCCAGAAAATGCGGTTGATTTTACATGGGGA
CTAACCTCATCTGTAAATAAAGATAAATTGCACAACTGTCAATTTAATAATTTAATGACA
CTTATTCATCATTACATGGCAGACCAAATACATTTAAAACATACGTGGTTATAAAATATG
TAATTAGGCAAAACATTGTCACGAAGCTTAGTTCATAACACATTGGGTGTTGCGGATGGG
GTCCGAACTATATTGTAGACTTAATAAAGTATGTGAATATGGACCTAGTAAAAATCACAC
ACATGCTTAAACGTGCTTAAATGTGAACTTTGCAAACGAATAGAAAAGCTGTGTAAGCCA
TACACAGACACAGTTAAACTTACTGGACAATGAGTTTTGTGGATAATCGTAAAGTCCAAG
ACATTTATGGATGATCCGTTTGGAATCACAAAACATTGAATGTTCAAAATTGGTTTCATC
ACAGAAAGGAGCAATGAAGCGCGATGGAGCACAACCAATCACAATGATTTTTACATTGCT
GCCCTAAAATTTAATATAAAAAGAGTTTTAATTTATCAGCAATGTATGGCATTGACAGCT
ATAGTTTGTATAGGCAGCAACTTTTTAAAATGCGCAGGAAACAGGGATAGTTAGACGTGC
ATGCCTATGGGACAAATTTGGTTTCTATTGTGTAGTGAATAATGCAATGCAACTCTAGAG
TACCTCTGCCCACCCTGCCACCCCAGGTTTGCCGCCTACGATTACTGCTTGTATAGTATT
ATACAGGCAATACTTATACATAAGTTATTTAACTTACTTCTAAGTGACGCGGGAATATTT
TGGAAAAATCTTCAACATATTCTTTGGCAACATAATCAATGAAGTGCTGAATAGAAAT
Chart Advanced