SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00000656_2.0
Identity
TranscripttRNA Sec 1 associated protein 1 (SECp43)
SpeciesDanio rerio (Zebrafish)
Transcript IDSPT00000656
Transcript release2.0
External IDNone
Gene SPG00000560_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000656_2.0 # Transcript # tRNA Sec 1 associated protein 1 (SECp43) # Zebrafish (Danio rerio) # Full length # Forward
ATGAACAGCCTCTGGATGGGCAACGTGAGTATTACTTCCCGATATAAAGATAGACGTGCG
TATGTTTTGGAGAAAGAGTAAATGAAGTATAAATAAATGAACACTTAGATCAAACAGTAA
CATAATGTAAGTTTGTAATGTTTGTGTTGAAAGCTGGAGCCCTACATGGATGAAGATTTC
ATCTGCAGAGCTTTTGCTCAAATGGGAGAAACAGTTGTGAAAATCAGACTGATCAGAGAC
AAAATAACAGGGTGAGGAATCATCGGTCTGTCTGTCCATCGTCTGTCTGTCGGTTAGTTT
CAGTTTGTTTTTGATTTCTTAAGGAAAAATGCAGGATATGGCTTTGTGGAGCTGGCAGAT
GATACAGCAGTGGAAAGATGCCTCCGCAAAGTGAATGGAAAACCTTTACCTGGTGCCACT
CCTGTAATCATGCACTATATTCTCTATTGAAGTGACAGATTCATACGCAAAATATGAAAT
AACTTTACTTTTAAGACATGAACTTACATTTCAATGCCGTTTACAGCCAAAGAGATTCAA
GCTGAGTCGTTCTAATTATGGGAAACAGGGTGAAAGGTGAGTAATAACTATGTTCTTTAC
TATGTGTTTACATATAACTAGCGAGATGTAGTGTTGCAACAACCAAGTATTCAAAAAAAC
CTTCTGTGTGGACAGAAAGTACACTGTAAAACCCAAAACGTTAAGGTAACTGAAACCGTT
AAAGGATACTGATTGCAACAAACCCTTTCAGTTCAAAAGCTAATCCTAATGAGTACTGTG
AACTTAATCCATTTAAGTAAAGAAAACAATTTGAGCACAGTAAAACTATATAAATGAAGA
GAACTCAAACCAATTGAGTACTGTAAACCCCATTAAGTTAAGGCAACTCAAACCATTTGA
GAAAACCGATTGCTACAAACTATTTGAGTTAAAAAACTAATCTATATGAGTACTGTTAAC
TTACTCCATTTAAGTTGAAGTAATGTTGGGCCAGATGGAATCTGCAGACGTTTTTTGCTA
TTTCTGCAGAGAATTTTTGTAAAAATCTGCGGATTTCTGTTAATTATTTTGGGAGTATCA
TAACTAAAACCTTAATATGTTTTAGTTATGATTCTGTGTGGGCCTATAATGAGGTATTTA
ACCCATTACCTTTAACACTGAGTGCAAAATGTTTCAAATGAGTAGAATAAACTTTCAGGA
AATTTTGAGTTATCTACACTCATTTTATTTGATAAAGTTTACTATCGGGTTTTAGAAATT
AGTAAAGCTATATTTTATATATATATATATATATATATATATATATATATATATAAATAA
GCAAATACAGGCTGTATTTGAATGGATATAAAAGTGTTAAAAACCTGCTACAATGAGAAT
TATTACTGTTATTAAATTATAAAAATCCTACATAGAGTCACAGGTTTTAAGTTTTAGTCC
GTTTTGGACTTTTTCTATGTAGATGTTCTGAATGTGTATATATATTAGCAAATCCAAAGC
ATAGTAATTGCTATGTAATAGATTAAATCACCCCTGATTAATCTTGAAATTTTTTATTTT
CACTCTTAGATACTTATAAGAAATCATTGAGTTCATGAACTGCTCTACTGTTAGTGTAGT
AATTGTTCATCTCTTTACTTCGTCTTTCTGCTGTTTCGTTCAGCTCTACATTCTCCCTCT
TCGTGTCGGATCTCACACCGGATGTGGACGATGGCATGTTATATGAGTTCTTTCATTATC
ATTTTTCGTCCTGCTGCAGTGGGAAGATTGTTTTGGACGCCAATGGACACTCAAAGTGAG
AACTTATGAAGAAGCTCTTCTCTGATGTTTTCTTCTTCATATGTTTGCTTTCTGCTGATT
GCTGTTGTTTGTAGGTGCTGTGGCTTCGTGAGCTTTGAAAGTGAGAGGGAGCAAAAACGG
GCTCTGGTTGATCTCCAAGGGGCTACTGGACTCGGGAAGAAAGCTTTACGCCTCAGCTTG
GCTTCAAGTAGAGTG
Chart Advanced