SelenoDB
Release 2.0
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Transcript Report for SPT00000656_2.0
Identity
TranscripttRNA Sec 1 associated protein 1 (SECp43)
SpeciesDanio rerio (Zebrafish)
Transcript IDSPT00000656
Transcript release2.0
External IDNone
Gene SPG00000560_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000656_2.0 # Transcript # tRNA Sec 1 associated protein 1 (SECp43) # Zebrafish (Danio rerio) # Full length # Reverse
CACTCTACTTGAAGCCAAGCTGAGGCGTAAAGCTTTCTTCCCGAGTCCAGTAGCCCCTTG
GAGATCAACCAGAGCCCGTTTTTGCTCCCTCTCACTTTCAAAGCTCACGAAGCCACAGCA
CCTACAAACAACAGCAATCAGCAGAAAGCAAACATATGAAGAAGAAAACATCAGAGAAGA
GCTTCTTCATAAGTTCTCACTTTGAGTGTCCATTGGCGTCCAAAACAATCTTCCCACTGC
AGCAGGACGAAAAATGATAATGAAAGAACTCATATAACATGCCATCGTCCACATCCGGTG
TGAGATCCGACACGAAGAGGGAGAATGTAGAGCTGAACGAAACAGCAGAAAGACGAAGTA
AAGAGATGAACAATTACTACACTAACAGTAGAGCAGTTCATGAACTCAATGATTTCTTAT
AAGTATCTAAGAGTGAAAATAAAAAATTTCAAGATTAATCAGGGGTGATTTAATCTATTA
CATAGCAATTACTATGCTTTGGATTTGCTAATATATATACACATTCAGAACATCTACATA
GAAAAAGTCCAAAACGGACTAAAACTTAAAACCTGTGACTCTATGTAGGATTTTTATAAT
TTAATAACAGTAATAATTCTCATTGTAGCAGGTTTTTAACACTTTTATATCCATTCAAAT
ACAGCCTGTATTTGCTTATTTATATATATATATATATATATATATATATATATATATATA
AAATATAGCTTTACTAATTTCTAAAACCCGATAGTAAACTTTATCAAATAAAATGAGTGT
AGATAACTCAAAATTTCCTGAAAGTTTATTCTACTCATTTGAAACATTTTGCACTCAGTG
TTAAAGGTAATGGGTTAAATACCTCATTATAGGCCCACACAGAATCATAACTAAAACATA
TTAAGGTTTTAGTTATGATACTCCCAAAATAATTAACAGAAATCCGCAGATTTTTACAAA
AATTCTCTGCAGAAATAGCAAAAAACGTCTGCAGATTCCATCTGGCCCAACATTACTTCA
ACTTAAATGGAGTAAGTTAACAGTACTCATATAGATTAGTTTTTTAACTCAAATAGTTTG
TAGCAATCGGTTTTCTCAAATGGTTTGAGTTGCCTTAACTTAATGGGGTTTACAGTACTC
AATTGGTTTGAGTTCTCTTCATTTATATAGTTTTACTGTGCTCAAATTGTTTTCTTTACT
TAAATGGATTAAGTTCACAGTACTCATTAGGATTAGCTTTTGAACTGAAAGGGTTTGTTG
CAATCAGTATCCTTTAACGGTTTCAGTTACCTTAACGTTTTGGGTTTTACAGTGTACTTT
CTGTCCACACAGAAGGTTTTTTTGAATACTTGGTTGTTGCAACACTACATCTCGCTAGTT
ATATGTAAACACATAGTAAAGAACATAGTTATTACTCACCTTTCACCCTGTTTCCCATAA
TTAGAACGACTCAGCTTGAATCTCTTTGGCTGTAAACGGCATTGAAATGTAAGTTCATGT
CTTAAAAGTAAAGTTATTTCATATTTTGCGTATGAATCTGTCACTTCAATAGAGAATATA
GTGCATGATTACAGGAGTGGCACCAGGTAAAGGTTTTCCATTCACTTTGCGGAGGCATCT
TTCCACTGCTGTATCATCTGCCAGCTCCACAAAGCCATATCCTGCATTTTTCCTTAAGAA
ATCAAAAACAAACTGAAACTAACCGACAGACAGACGATGGACAGACAGACCGATGATTCC
TCACCCTGTTATTTTGTCTCTGATCAGTCTGATTTTCACAACTGTTTCTCCCATTTGAGC
AAAAGCTCTGCAGATGAAATCTTCATCCATGTAGGGCTCCAGCTTTCAACACAAACATTA
CAAACTTACATTATGTTACTGTTTGATCTAAGTGTTCATTTATTTATACTTCATTTACTC
TTTCTCCAAAACATACGCACGTCTATCTTTATATCGGGAAGTAATACTCACGTTGCCCAT
CCAGAGGCTGTTCAT
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