SelenoDB
Release 2.0
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Transcript Report for SPT00000734_2.0
Identity
TranscriptSelenoprotein U1 (SelU1)
SpeciesDipodomys ordii (Kangaroo rat)
Transcript IDSPT00000734
Transcript release2.0
External IDNone
Gene SPG00000638_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00000734_2.0 # Transcript # Selenoprotein U1 (SelU1) # Kangaroo rat (Dipodomys ordii) # Full length # Forward
GAAATGTCTTTTCTCCAGGATCCAAGTTTCTTCACCATGGGGATGTGGTCCATTGGTGCA
GGTGCCCTGGGGGCTGCGACCCTGGCAGTGCTCCTGGCCAACACAGACCTGTTTCTGTCC
AAGCCAAAGAAAGCAACACTGGAGTATCTGGAAGAAATTGATTTAAAGACGCTGGAGAAG
GGTAAGGAGCCACTTTGCTAATTTCAGTACTTTTCCAAGGACCCGGCATACAGGCTTGCT
CATGTTTACTTCCTAAATTCCTCTTCATTTTTTTTCTTTTTCTTTAAATTATGTTTAAGT
AGTGTACAATTCAGCGGGTCAGTTTATGAGTACAATGCATCTTGATCAGCATCATTCCTT
TCTTTACTTCTTTTCACTTGAAAAGCCAGGCAATAAGATTAAGGGAATTTTGGTAGAACA
TTTTGCTTACTTTTTGATTTGGGCCTGTTCCTTTCCATGAGTCCACATAATTATATAGGT
GTGATCTTGAAATTAGTGGCTAGTTTATCTTTTTTAAAAAAATCAGAATCATTTTTTTAC
TCTTATTGTCTCACTAACTGTAATGATAAATTGTCCCATGATAATTTGTAATATTCTACT
ATCACTTAATAAACCAGCTCTTCCAGAATGTTCTAAGGAATCCCCAGCTTGTGGGCTCTT
TACAAAAATAAAAATAGAAAAATAGAAAAAGCAGTGAGTTAAGTCGGCTTGAGGAGTACT
CGTTACTCAACAAAGCTTGTTCAACACAGGGTTTCCCAATCTTCTTTGACTTCCATTTCC
TTTCCTGCCTTTTAGTTCATGTAATATCTCACAGGCACATGGATGCCTGTGGGAAATACT
GAAAGAATTCCTCTCTCTCTCTCTCCCTCCTTCTCTCGCTCTGTCTGGGGTGGGAGGGAA
GAGTGTTATTTGAGTTTGAACTCAAGAGCTTTGCACTCATCCAACTTGCTTGTTGATGGC
TGGATCTTTACCACATGAGTCATGCCTTCAGTGCTGCTTTTTGCTAGCTATTTTGGAAAT
GGGGTCTAATGAGCTTTTCTGCCTAAGCTGTCTTCAATTCTCTGTATCTCACTTCTAACT
AGGAACCCAACTCCAAGTTTGTTTGTTTTCCTTTTGTGCTGGTAGTGAGGCTTAAGCTTA
GGGTTTGGGTGCTTAACCTTTTCCCTCATGACTGGCACAACTCCACTTTCAGCTTTTTTT
TTTTTTTTTTGCTGGTAAATTGAAGATAAGAATCTCACAGATTTTTCTGCTTGGATTGGC
TTCAAACAATGATCCTAGATCTCTGCTTCCTGAGTGGCAAAGATTATAACCATGAGACAC
AGATACCTGGCTCAACTTTTTTTTTTCATTTTTATGCTGGTATTAGGGTTTGAACTCAGG
GTCTAGGTGCTGTCCTTTAGTGCTTTCACTTAAGGCTACTGCTTTACTACTTTAGCCACA
TTTCCACTTTCAGCTTAGTGGCTAATTGCAGATAAGAGGTTCACAGACTTATCTGACTGG
GCTGGCTTTGAACTGCAATTTTCACATCTCAGCCTCCTGAGTAGTTAGGATTATAAGTGT
GAACCAGCACCCACCTCAAAATAATTTCCTAAATAATGTAAAAAGAATTTTTTGGGGTCA
CTCATAGGCTTGAACTCTGGGCCTGAGTACTGTCCCTCAGCTCTTCAGCTCAATGTGAGC
ATGTTCTACCACTGAGCCATAGAACCACTTCCAGTTTTCTGGTGGTTTATTGGAGCTAAG
AGTCTCATGGACTTTCCTGTTCGGGCTGGCTTTGAACCTCAATCCTCAGATCTCAGCCTC
GTGAGTAGGGAGGATTATAGGATTATAGGTTTTAGCCATTGGTGCCTGGCTTATAAAAAA
TTGTTTTTTAAACTTATGTTTACTTATTCCTTTTGAAAACATGGGTGTGTGTGTGTGTGT
GTGTGTGTATGTTGGTATGTTGGGCTAATGTTTTGTTTGGGGAAATTTAGGGGTTCTTTT
CAATATTTGTGATTGAACTCACGCTTGCTAGGCAGGTATTCTAGCATTTGAGGCATACCT
CCAGATCTTTTTTGGTTTCTGTATTTTTTTTTAAATGGGTCTCCCTAACCTTAGCCTGAT
CTGACTTTGAACTTGTGATTTTTCTACCTCTTCTTATTGAATAGCTGAGATTACAAGCAT
GTACTACCATTCCTCATCACTTTGAATAGTTTTAAGATTTTTTTTTCTTTTTTCAAAGTG
TAAGACCTTTTTAGTTTTGGCAATATTTCTGCTGCACAGATATTACATGTCTAACAACAT
TAGCCATTAAGGGAATTGACATTTTACTAGAAATGTCACGATTTGGAACATTCAGTGCCT
GGGTTTGACTCAGGGCCTTCCCTGTAACTTGAGCTACATCCCTATCCTTTTTTGCTTAAG
TTGTGTTTTAGGATCTCATACATTTTTTTGTGGGCTGATCTTAGACTGATCCCTTTGTCT
GTGCTTCCCTAGTAGCTGGGATTACAGCTGGGTGCTATCATAACCCAGCTATTCATTTTT
TAATTTGTGCCAGTATTGGGGCTTGAATTCAGCACCTTAAGCTCTCTCGTGGCTTTTTCC
ACTCAAGGCTGGTGTTCTGCCACTTGAGCTGTATCTCTACTTCCAGCTTTTTGCTGGCTA
ATTGGAAATAAGAGTCTCATGGACTTTTCTGCCTGGCTGGCTTCAAACCTTGATTGATCC
TCAGATCTTCACTTCCTGCATAGCTAGAAGTACTTATTAAAGGTATGAGTCACCAGCACC
CAGCTCATCCCTAGCTTTTTTATTGAGATGGAGTCTCACTAGCTTTTTCCCTGGCCTAGC
TGCTAACTTCGATCTTTTTTATCTCCACCCGTCAAGTAGGTGGTACTATAGGAGTGATCC
ACTATGCTGAGCCCTTGAAAATAAATTTTTCTGGGGCAGTGGCCTTTAGAATATACATGC
TGTAGAATTCTTAAGTTTTACTAACTTTCCTAAGGAGAATGAGCATTCCTCTCCTGTGCT
TGTCTTTTTCCATACATAAAGTACCTGATCTGGTCCTCTCCCATGCCTGGCTCCACTCAG
TGTATTTCACATAGGGCTTGGGGAAGAGCTGGGCCGGGCTAGGAAGAGATCCTGAGTTTT
CATTTCTTTTCCCTTAGAACCAAGAACTTTCAAAGCAAAGGAACTATGGCAGAAGAGGGG
AGCCGTGATTATGGCTGTGCGTCGGCCAGGTTGTTTTCTCTGTCGAGAGGTAAGTGAATT
TTGAGAATCTGATCAGAGAAGAAGATCCCAACAAATGTCCCCAGGAGCATTCAGCCAGGA
CCAAGGGCCGCCTGTCAGTGCACTCACCTTTATTCAGCCCTGACTAGTCTCTGTTACTTA
CTCTCCATGTTTATTTTAACAGGTTCTGTTCTTGCCTTTTAATCTCACCATCTCCTCCTG
GGCTTAGCAACATACTTCCTCTGGTACTTGCAAGGTGTGTGGAAGTAGCTGTGTCTTAGA
CTAGATTCCCATTGGACTGCAGCGGTCCTAGGGCCCTTTTCTGTGTTCCTGATGGTGTGC
ACAGACGCATGTGGCCAGCAGGGTCTGCAGCACTGCTCATACTGCTTGGTCTATAGTGAA
GCTGCAGCATGTGGCTCCCCGCAAGGTCAAACTCTTAAGACACACCTATCTGCCTGCCCT
CCCCTTGGGGGCATGCCTGGTTCTGTCACCAAGTTGGAGCTCATCAGCTGGGTCAGCTTC
AGGTTGGCCTCTCGATGGGAAGCCATCATCGTCTCTGTGGTAAGGTATCTTATCAAGGGA
AAGCAAGAGTTCTGCTCAGCCTTGTAAATAAAGCTGATGGGTAAAACANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACACACACACACACACACA
CACACACACACACACACACACACACCCTGGAAGTGGAGTTATAGTTCAAGAGGTAGAGGG
CCAATCTTGAGTGAAAAAGCTAAGGGACAGCACCCAGACCCTGAGTTCAAGTCCCATTAG
TGGCACAAAGAACAAAAAAGAACAAAGACCAGAATGGATTGAGGACTTACCCAGGTGTTT
GTAAAAGCCTGAAGTTCAGAGACTTCTGACTTGTCAGAGGAAGCTGGCATCGATAATATT
CTTGCCCTTGAGCCAGGTAGCTCTGTTGACTCTGTCTGGGGTCATTCTCATTCCCCTGGT
TGCTCAGGCCAACCCGACAGGATATTCTTGTCAGCCCTGCTGGCCTTTTACCCTTCAGTG
CCTCCCTTCTGGCACTTGCATTTCTGTTGTCTTGCAGGCTTTTCCCCTCCTTATCTCTTG
GCAGTACAACCTGAAGTTACTATTCCCATTTTATGAAAAAGGAGAAGCTTGGTGGTGCAG
ACGCTATAGTCAAGCCACATTGCCTGGAGAGGTGTATTAATTGCCTCTTGCCTTCTAACA
AATTGCTGTATAGAACATAGTTATTTTACAGTGCTGGAGATCAGAATTCCAATATGGACT
CTGGCTGCATTCCTCCCAGACACAGTAGCAGGAATCTGTTTTATCTTTTCCAGCTTCTAG
AGGCTGCCAGTATTCCTTTGCTTGTGGCCCCTTCCTTTAGTTGGAAAGTTAGCAATAGCT
GGCCATGTTCAGGTCACGCTGTGTCTCTGTGACACCAACTTTTCTTAATCTCTTTTTTTT
TTTCTTTGTCTGGTTGTGGGTCTTGAACTCTGGGCATGGGCTCCATCCCTGAGCTCTTCA
GCTCAAGGACAGTGCTCTACCACTTGAGCCACAGTGCCATTTCTGGTTTCCTGGTGGTTA
ATTGGAGATAAAAGTCTCACAGACTTTCCTGCCCGGGCTGGCTTTGAACCAATCCTCAGA
TTTCAGCCTCCTGAGTAGGTAGGATTACAGGCCTGAGCCACTGGTGCCCAGCATGGATCT
CTTTTGCACATTTAAGGACCTTGGTGATTACATTGGGTCAAGTCATATAACTTATGATCA
TCTTTTTTTTTTTTGGGGGTCCAGTCGTGGGGCCTGAACTCTGGGCCTGGGCGCTGTCCC
TCAGCTCTTCAGCTCAAGGCTAGCGCTCTACCACTTGAACCACAGCGCCACTTCTGGCTT
TTTTCTTTTTGCTTATGTGGTGCTGAGGAATCGAACCCAGGGCCTCATGCATGCAAGGCA
AGCGCTCAACCACTGAGCCACCTTCCCAGCCCCTGATCATCTTTTTTTTAAGTCTACTGA
ATCTAGAATTCTAAATTTCATCTCTGTCTTCATTCCTTTTTGCTGTGTAACTGCATGTTC
ACACATCCCAAGCATTATATGATTATCTTTTTAGGCTTGTTTAGTCTGCCTCCTGCTGGA
GTCAAAGTTTAAATTCAGGATGAATTCCAAATCGGTTGTGCCTCTAAATACCAACCTAAA
AGCTTGTTTTGGCTTGATCTGTCAAGGTCAGTAAAGCCCAGAAGGTTCCTAGAACAACAG
AACGCTTGTTAATTGTAGCCTAGTTTCCTCTGTGGAAACTTACAGATGCCAAAATAGTTG
GCAGATGGTAATCTGAATTATTTGGAGAGGTCCAGGGAGAAGCCATGTGACTCAGTTTCC
ACTCTCTGACTTTGTATGGTATACTTTCCAGAGGAAACTATGAAAGTTCATCTTCAGTGG
GTACTCATTAGCCATATTAGACACTTGTAGTCTCCTTCTGCTTTCAAGCACTGAAGCCCT
TGATAAACATGTTATGTTTTGTACTAGCTATTTTTTTCTCATTCTGGAAAAATAAAAAAA
TTACTGGGTGCCAGTGGCTCACATCTGTAATCCTAGCTACTCAGAAGCTGAGATCTGAGG
ACTGTGGTTTAAAACCAGCCTGGGCAGAAAAGTCCATGATACTATTTTATCTCCAATTAA
CCACCTTAAAGCCAGAAGTGGAGCTGTGGCTCAAGTGGTAAAGTACCAGCCTTGAGGGAA
AAATCTAAGGGACAGTACCTAGCCCTTGAATTCAAGCCTCAGTACTAAAATAAATAAGCA
AGTAAATAAATAAATAGAAAAATTTAAAAATAATATACTTGCCACCAATTACATTTGTAC
CAGAGACTAGCAGGCTACATTTGAAAAGATTTCTTGCCCATGCTTTAATTCTGACATCTA
ATGTGAGAAAGGAATTTGTTCTTTTTGGGGGGGGAGTGGGGGGAGTCATGGAGCTTGAAC
TCTGGGCCTGGGTGCTGTCCCTCAGCTCTTCAGCTCAAGGCTAGCACTCTATCACTTGAG
CCACAGCTCCACTTCCAGTTTTCTGGTGGCTCATTGGAGAAGAGTCTCACAGACTTTCCT
GCCCATGCTAGCTTTGAACCTCGATCCTCAGATCTGAGTAGCTAGAATTACAGGCGTGAG
CCACCAGTGCCTGCTAGGAATTTGTTCTTAAGGTGGAAGTTCTACATGACTCATGCAGTA
TAGTTTATACATCTAGCGCACGGCTCCTGAATGTCAAGGATGTCTATGCTCTTTGGCTCA
GTTGCCTGCTCCCCATTATCCACCTTCACATCTGTCCATCTGCTCTCCAGTGCCATCTCT
ATATCCAGCCATGTTCTAGGCACTGAGGGCTCCAAGAAAGGGAAGACATTGATTTAAGCC
ATGAAACACATTTGGGAATCTAAGCAAAAAACCCTCTATATAATAGCTACATGAAGACTC
AGCATACACAAAAAAAGAATACGTATGAGAAGCAAGGCTGTAGTCCAGGATGGACAGGCC
AGGGAGATCTTTCTAGAACATGGATACCTTTCCAGAGGGTCAGGTTTGATCTGGATGAAG
GAGGAAGGCTATAGTAGGATATGGAAGCTCTTCAAGCAGAAGCATAGAGGCCATGATCTA
CACGACACATGTCTGATGGGTCCTTGAGCAATACTTTGGTCCAGCACAGGAGAGGGGCTG
GGAGACAAGGTAGGAGAGAGATACCTAGGCCTTCACTGTCTCTGACATGTTGCTGCTGCT
GTTCATCCAATGCTCGCTGTGAGCCCTGCTCTGGTCCTGTGAGGGTGAAGCTGTGGTTTA
TTGGCTGCAGAGCCCCCTGGAGTTTGTACCCCTGAACTTCACTGTGTCCCACAGGAGGCT
TCAGACCTGTCTTCCTTGAAACCGAAGCTGGAGGAGCTGGGCGTCCCTCTGTATGCTGTA
GTAAAGGAGCACATCAGAACCGAAGTGAAGGACTTCCAGCCTTACTTCAAAGGAGAGATC
TTCCTGGATGAAAAGGTATGTGTGGGATGTGGGTGTGGGCTGCTGGTTGGGTATATGCAG
GCAGGTGAGGATAGTGCTCAGCTATAGAGAGTTCAGTGGACCAGGGCCTGTCTGGCATGG
AGCTGGAGGCAGCCTCCCCTTCAGCTATCCTGAACTTTCAGGGGTTCTCCAGCCCTCTGA
GCAGAACAAAGTTAGACTCTTAAAGGCAAACAGATTCTTTTTTTTTGAGCCGGATCTGGG
GCTTCAACTCAGAGCCTAAGTGTTGTCCCTGAGCTTTTCTACTTATGGCTAGCATTCTAC
TACTTGAGCCACAGCTCCACTTACAACTCTTTGGTGATTAATTGGAGTTAAGAATCACAC
GGACTTTCCTTCCTGGACTGGCTTTGAACTGTGATCCTTACATCTCAGCCTCCTGAGTAG
GTGGGATTACAGGCATGAACTACCAGCGCCTCAGCAGCCAACTAACTCATGAAAGTTGTT
ATTACAGACTTTTCCTGCAGTGTGATCGAGGAGAGGAGAAAGTAGCTAAACCCCATCAGG
CGCTTCCACTATTGCTGGTTGGAGCTACAACACAAACTCCTGTCCTCTTGATTCGTTGTG
GGTGTCTTTCTTTCCCTGTCATTCTCTACACTGTTATACTGTAGGAACATGAGAAGTTAC
AGAGTTGTTTGCAAGGTTGGGCTAGAAGTTGGATTCTCAGGAGATCTGAGGATCACAGTT
AGAAGCCAGCTTAGGCAGAAAAGTTTGTGAGACTCTTTTTTTTTTTTTTTGGGTCTGGTT
GTGGGGCTTGAACTCTGGGCCTGGGCGCTGTCCCTCAGCTCTTCAGCTCAAGGCTAGCGC
TCTAGCGCTTGAGCCACAGCACCACTTCCAGCTTTTTTCTTTTTGCTTATGTGGTGCTGA
GGAATCGAACCCAGGGCCTCATGCATTGCAAGGCAAGCGCTCTACCACTGAGCCATCTTC
CCAGCTCGAGTTTGTGAGACTCTTATCTCCAAATGAGCAAGACTCAGGAAGTAGAGCAAA
ACTCAGGAAGAGAGCAGAACTTACCAGCTCTGAGCAAGGGTGGGGCCCAGCATTCAAGCC
CCAGTACCAAGAGAAAAAAAAAAAAGCTAAACCTCGCTGTGCTCTCTCGTTCCTCTAGCA
GTTGAGTGTGGTCCTGAGTGGGGTTCCAGGGACACACAGGGAGGACCTGAAGCTGCAGAC
CTTGCATGCATAGCTGAGAACCAGAGCATTGCAGAAAACCTTCCTTTCCTTCCCCCGGGG
AAGACAGGCAGGAATACAAGGCCTACTCACCCAACGTCTCTCTTGCCCCATAGAAAAAGT
TCTACGGTCCCCAAAAGCGCAAGATGTTGTTTATGGGATTCATCCGTCTGGGCGTGTGGA
CCAACTTCTTCCGGGCCTGGAATGGAGGCTTCTCAGGCAACCTGGAAGGCGAAGGTGTCA
TCCTCGGGGGAGTTTTTGTGATGGGGTCAGGAAAGCAG
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