SelenoDB
Release 2.0
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Transcript Report for SPT00000883_2.0
Identity
TranscripttRNA Sec 1 associated protein 1 (SECp43)
SpeciesEquus caballus (Horse)
Transcript IDSPT00000883
Transcript release2.0
External IDNone
Gene SPG00000787_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000883_2.0 # Transcript # tRNA Sec 1 associated protein 1 (SECp43) # Horse (Equus caballus) # Full length # Forward
TACGTGGATGAGAACTTCACTGCCAGAGCCCTTGCCTCCACAGGGGAGACCAGGATAAGT
GTCAAAATTACCCAAAACAGCCTCACTGGACTCCCAGCTGGCTGCTGTTTTGTAGAATGC
ACAGATTTGGCAACAGCTGGGAAGTGTTTGCATAAAATTAATGGGAAACATCATCTAAGA
GCCACACCTGCAAAATGTTTTAAAGTGAACTATGCCACTTGTAGGAAATAACCAAATAAT
AGCCCTGAGTACTGCCTCTTTTGGGGGAGGGTCTGATCCAAGATGTGGATGATGGCAAGC
TTTTAGAATTCTTCATCTACATCTGCCGCTCCTGTCAGGAAAGCAAGGTGGTTTTGGATG
AGGGCTATGGTTTTGTGAAACCATTGGGCTATGGTTTTGTCAAATTCACGGATGAATTCA
CAGATGAAAAGTGGGTCATATGATTCAAATAGCTACTAAACCCTGGGTTTAGAGGCCCTT
CCCAGGTGACAGGCATGTAAATCATTAAGATTCTCTGAGGTCAGAAAGGATGTATTATCT
GCTTTATGTCAAAAAGCAATAGTTTTTGGAAATTTACCAATGAACAGGAACAGAAGCAAA
CCCTTACAAAGTGCCAGGAAGCAGTGGGGCGGGGGTCTAAACAGGCACTGCTGAGCATAG
CAATCCCTAACGTGAGCCATGTGGAGCTGGTGGAATACAGTCAGATGTGCAGTTACAGCT
ACAACCAGTATTACCAGCAGTACCAGAACTACCACTCCTGGTGGGGTCATGACCAGAGCA
CAGGCAGCCACAGCAACAGTTCCTCCCAGTGTGGCCATACCCAGAGTACCATGCAGACAT
ATTGTTCCGCCACATGCCCAGCCGAGTGAGCAGTGCCCGATACGTTGCCAAGAGACCAAA
GAAAAGACCTAGAGACAGCGAACAAGACATAAGGGTTTATTGGGAAGTTCCGTACAGGGA
GGGTCCAGTGGCAGCCAGCTGGACTGAAATGGACACGGCTACCGGCCCCTGAGAGAAGCT
TGCTTAAGTAGGCAGAGGAACAAAGGCTGCATGCTTGCCAAGGGGGACTGTCCCTGTATG
ACCTGCATTCCAAGGACCAGAGCCCCATGCTCCGCCCCCCGCCGCCCCCCACCAAGGGCC
TCCGTGTTCCCTCAGATCTCAAGGGTCTTTGTGCTAACTCTCCAATGAGAAAACAGCTGG
GTTAACCAAGCCCAGGACTGTTATCATTGTGAGTGCTGGTACATAGCCCAGACAAGGAGC
CTCAAGGACACATGGTCTTAAAAGGGCACACCAGCTAGTGCCCCTACACATATGAAGAAG
TTGCACTCGATCGATGACCCCGTGCCACAGCTGGGTGTCACTGAGGCCAACAAGGAGTTC
ATAGAGCAGACTGAGGAGCTGTATGATGCACTGATGGACTGTCACCGGCAGACCCTGTAC
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