SelenoDB
Release 2.0
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Transcript Report for SPT00000925_2.0
Identity
TranscripttRNA Sec 1 associated protein 1 (SECp43)
SpeciesErinaceus europaeus (Hedgehog)
Transcript IDSPT00000925
Transcript release2.0
External IDNone
Gene SPG00000829_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00000925_2.0 # Transcript # tRNA Sec 1 associated protein 1 (SECp43) # Hedgehog (Erinaceus europaeus) # Full length # Forward
CTGGAGCCCTACATGGATGAGAACTTTATCTCCAGAGCCTTTGCCACCATGGGGGAAACC
GTGATGAGCGTGAAAATTATTCGGACCGCCTCACTGGGTAGGGTCTGTCTGTAGCACCGC
CGTCCTGCAAGGGCCATTCAGGGGCATGTAAACGTCGCAGAGTAAAGCAGGGTATCTCAC
CCCCAGTACTTACTATAATGTAGCAAAAGCCAATGTTTCTGGGCTTATTGAGAGGAAACA
TAGCATATTGCTTCAGGACTGAATGCTGAAGCTAAACTAATGAGTTTGTGTGACCTTGGG
TAGGTGATTTAATCCTCTTTCAATGTAAGCTGTGGCCCTGGAGGTGGCTCAGTGGACAAA
GCAATGGGCTGTCAAACATGAGCTCCTGAGTTCACTCGCTAATTTACCATCTGTCAGAAT
GTTGCAGTGATCTCTCTCTCCCACTCTTATTAGTAATAAATATCTTTTCTTACAAAGGTG
TGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACACCTGTGGTAAGCGAAGCCC
CTGCAGGTGGGGAGCCGGGGCTTGAACCGGGATCCTTCCGCCGGTCTTTGCTCTTTGCAC
ATGGTGCAAAGAGCAAAGACTGGACCAGTGTAAGGATCCCTGTTTGAGTCCTGCACCCCA
CCTTTAGGGGCGTTGCTTCACAAGCGGTAAAGCAGGTCTGCAGGTGTTTATCTTTCTCTC
CCCTTGCCTTTCCCTCTGTCCTATCCAACAATAATGACAGCAATAATAACAATAATAATA
ACAACGATAAACAAGGGTAACAAAAGGGAAAAAATAGCCTCGAGAAATAGTGGATTAATA
GTGCAGGCACCAAGCCCCAGCAATAACCCTGGAGGCAAAAAAAAAAAAAAAAGGACAATG
CCTTCTCAGTTCCTTGCTGGTATAGGCTTGCATTTTCTCTCTATCTCTCTATTTGTTATC
CTCCCTGACCTTCCACTCTGTTGAAATGACCCATTTAATGTAGTGACTTCAGAGGTGACT
CAGCTGTAAAGCATATACTTTACTTGTTTGAGGCTCTGGGCTCAGTCCCTGGCACCACAG
AATGAAAATGATTATTTATTTATTTTTTTAATATTATTTATTCATTCCCCTTTTTTGTTA
CCCTTGTTTTTTTTATTGTTATAGTTAATTGATGTCGTTGTTGTTTGATAGGACAAAGAG
AAATGGAGAGAGGAGGGGAAGACAGAGAGGTGGAGAGAAAGACACACCTGCAGACCTGCT
TCACTGCCTGTGAAGTGACTCCCCTGCAGGTGGGGAGCTGGGGGCTCGAATTGAGGTCCT
TATGGCCGTCCTTGTGCTTTGTGCCACCTGCGCTTAACCCACTGCGCTACCGCCCAACTC
CCGATTTTTTTTTCTTATGGCACTGGGAGATGACCCAGTTGGGCATGAGGACCTCCTACT
TGAGCGTCTAATGCTGTATCCGCTGCACCATCTCCCACACCACACTAATATGCTGTCTAC
TCCCACTCTTTGTGTTTTTTTTTTGAGAGAGAAAGTGAAGGAGAGACCATGGCATCAAAG
CTTCCTTCAATGCTGAGTAGGGCCTGTGCTCAAAACAGCACACTGCCCCAGTGAACTATT
TCTCCAGCCCTCACAATGCCTAGTTTTATATTTTGAGTGCTTCTGAGCCCATCTCCCCAC
CTGCTCTCCCTAGTACTTTAAACCAGACCAGGTTTATGTCGTGGGTAAAGAAGGACATAT
AGCTGGAAACTCCTATAACTCTCCTACCAGGCGGCCAAATGAAACAGACTTGGAACTATC
AGATGGGTTGCTTTGCAAGAAGACTTAAGAAGGGTTTTCCAAGAATGGGCCAAAAGAGAT
TATCAGAACAAAAATGCTAGTCTTTGTCTCTGAATCTTGGTCTCTCCTCTCAGCCCTGAG
TATTCCCTCTTTGTGGGAGACCTGACCCCAGATGTGGATGATGGCATGTTGTATGAATTC
TTCGTCAAAGTCTACCCATCCTGTCGGGGAGGCAAGGTGGTTTTGGACCAGACAGGCGTG
TCTAAG
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