SelenoDB
Release 2.0
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Transcript Report for SPT00000996_2.0
Identity
TranscriptSelenoprotein N (SelN)
SpeciesGadus morhua (Cod)
Transcript IDSPT00000996
Transcript release2.0
External IDNone
Gene SPG00000900_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000996_2.0 # Transcript # Selenoprotein N (SelN) # Cod (Gadus morhua) # Full length # Forward
ATGGCCGGAGACGTGGATCAAGGAACAGACCGGGAAGAGCAGCCCGACCCCGGGGGACGG
GGGCTCGGTGGGCCGCCCTCTGCCGCGAAAAGGGGTTCGTGGATCACCCGGGCGCTTGCT
GCGCTGGCGGTGTTTGCTGTAGTCCCTGTTCTAGCTTTTGGCATAAAATATTACCAGGAT
GGTCAGCAACTTAAACGACATGTAAGTATACTTTAAGAACGCATACGTAGATACAAGTGT
GTTATATCAAGTAGGCTCCAATATCGTCATGGTACATTTTTCTATTCTCCAGATGTTCTT
AAATAATGCCCTACATCTCCCTGCCACGCACCTCGATAGGAACAACCGTACCTCCTGAGT
GTGAAGTGTGTTTACTAGGGGGGGGGGGGTTCTTGGTCTGCACAGCTGCACGCAGTAAAT
GGACGAACCTGCCAGTCCTCGCATTTACTGTGTAAAGCACGTTTGGAATGCGTTTAAGCT
ATACAATCTACATCTATGCCATGTTGCCATATTGAGCCAATCAGGGATGCATGTGTTCCC
CAATAGGAGGAGAGCCTGAAGATCCTGGGAGCAGAGGGCCTTTTCCTCTTCAGCTCCCTG
GACACGGACCAAGATTCATATCTCAGTCCAGAGGAGTTCAGACCTATTGCGGAGAAACTC
ACTGGTACGTCCCCATTACGTTCATCCTTCTGCCTCAGACTCTCGCCCTCTTGCCTTAGC
CTTGTGATATACACTCTGGTATCGATAAGTGATGCCTTCTCTGACTTTTCTCCAGGGATT
ACCTCTCCAGGAGAGTTTGAAGAGGAGGAGAGCCATGACCCAAACGGAGAGACTCTGGTG
CTGGAGGCGACCATGCAGCCTCTGCAGATGGACTCCATGACCAAGAGCAAGGACGGCTTT
CTGGGGGTACGACGCCCAGCAGCTAAAGTGGAACAGGGAATTCAGTTCTCTCTTTTGGTT
GGAATTCAGCCTCACAGTGGCAACGCTGTGTGAGAGAGACACTCTGGGAAAACCGCTAAC
CTCCGTCTGAAACTAATATAAGTTTACATGCCACATGTTATAAATTGGCGTAATGAGAAC
TGCATTCTGATTAAAAAGAGAAAGAGTTGCCTCTTGTGCATAATATAATTTGTCTTATTA
CATTATATACTGGACTCTACATTATATATGTATATATATAGACTTATATTCAAAGAGTTG
CATAATGACATGCCTCAAACATTTAGTGTTTCTCATGTATGTTGTTAAGGGCAACTGCTC
AGCAGGCTTCATTAAATCCTCATGCCTATAAAAACATCCTGTCTTCCATCTCGTTCCAGG
TGACCCACAGCTCCCTGAGTGGGCTCCGTGCCTGGAGGGCCCCGGCCACGCCCTCCTCTA
CCTTCTCCGCTGGCCAGTTCAGGGTTTTCCTGCCACCGAAGAACAAGCATGAGGTGGGGG
ACACCTGGTGGGTGATCCCCAGCGAGCTCAACATCTTCACGGGGTACCTGCCCAACAACC
GCTACAACCCGCCCCCCCCTAAGGGCAAAGAGGTGATGCCCTCGGGCGTGTTGACCTTTG
ACCCAAGTCTAGTCCGGCCCGTGACTAACGAGGTGTTGTGCTCCCAGCAGGTGTTCCTCC
ACTCCCTGCTGAGCATGTTCCACCCGCGGCCCTTCGTCAAGTCCCGCTTCGCCCCGCAGG
GCACAGTGGCCTGTCTGCGGGCCACCAGTGACTTCTACTACGACATCGTCTTCAGGTGAG
GGGTCCAGTGACTTCTACTACGACATCGTCTTCAGGTGAGGGGTCCAGTGACTTCTACTA
CGACATCGTCTTCAGCTGAGGGGGTTCTGGATATGAGGTCAACATATTATAAACATGTTT
TCCAGAAGGTGTCAACTATTGGACTGCATTTCAACACGATGCATTTGCCTATTCAATATT
TGATCGCTGTCTCTGAACCCTGGGTTTATCTTCTGTCTGCTGACGTGTAAAGGGTGCCTC
TCTCTCTTGCTCTCCACCGCTGCAGGGTGCATGCAGAGTTCCAGCTCAACGAGGTTCCAG
ACTTCCCTTTCTGGTTCACTCCAGGCCAGTTCACCGGAAACATCATCATCTCAAAGGACG
CCTCTCACGTCCGCCACTTTCACCTCTACGTCCCCAACGACAGGTAGGCCTTCATCCAGG
TTCTCCATGAACCTCCACCGGGAACCTGTCCTAGATCACATCTGTCCAAGATCACACCTG
TCCTAGATCATACATGTCCTAGATCACACATGTCCTGATCTTCATGTCTCCACAGGCCTC
TGAACGTGGACATGGAGTGGCTGTATGGAGGCAGCGAGAGCAGCAACATGGAGGTGGACA
TTGGCTTCCTGCCTCAGGTACGTCTGCAGGAAACCACTTAACAAGCAATCCATGTTCCAC
AAAACATATTTTATGAATGAGGTCCTCGTCTTGACACATTAACCCAGACGTCCAAAATGC
TTTATGCGCATAGAAGAAGCATCTGAGACCAGGGCAACCCAAATTATGTTACTATGAAGC
GTTAACGCTCTGGAAGGTCTACAAACAGCGGGACAAATCCCATGCTCTGTGTTGACGTAG
AGAACCTCTCCGTGGTTGGACATGGGAGGCTATGGGTTACTTCTACATAGTTCTTTACAG
CCAGCAGGACCGAGCTGAACCATGTGCGGGAACTCTCACGTCATCGGACCCCCTCAAGGG
AGGCCGAGTGGATGAATTCTATTCTATGTTGGTCTACAGCTGGAGCTCCTGTCCAGCGGC
CCGTCCACGCCCCCGTTCGTCACGGACGAGGAGGGCCGTATGGTGGAGAGCCGCGGCCCG
GAGCCCATCCACTTCGTCTTCGAGGACATCCACTGGACCGCCGAGGTCAGCCAGCAGGAG
GCGCAGCGCCACCTGGGGGTCACCTTCTACCCCTTCAAGAAGGTACGTTACCACCAGCCC
CGGAGGTCCCCTTCTGCCCCCTTTTCAAGAAGGAGTCTAGCAGATCCTGACAAAGTGACT
GTGTTCCCAGGTGTCCTACCTGCCCCTCCCGGAGGCGTTCGAGCGCGCCGGGGCCGAACA
CAAGCTGGTGCACTCCATCGTGCTCTGGGGCGCGCTGGACGACCAGTCCTGCTGAGGTGA
CTACACTCTCAGCTCTCGTAGGCTACTCAATATCTGAGAGAAAAAGAAACTCATAGCAAT
ACCATTTCTAGCAGGGAAAGTTATTGTTAACCTTGTTGGCAGTAGCAGTCCATTACAACG
CATTACGCGGTATTTAGCGACTGTAGCATGTCCAGTTAGAAGTGGAGTTGTACCGCGTAA
ACCACGTATCTGACAGCAGGATGCCAGTTAACATTTCTGAAATATGACCCCCCCACCCCC
TAGTTGAAATGGAACGTGCTAGTCCTAGAACCGGGTTAAAGAGGACCGTTGTTGGCTTCA
CCTCAACTCAGGGCCTTCTGTTGGCTCACCTCCGCTCTCTTCTTTTCTCTTCCGGTAGGT
TCTGGGCGGACCCTCCGGGAGACGGTCCTGGAGAGCCCGCCCGTCCTCGCCCTGCTGAAC
CACAGCTTCATCAGCAGCTGGTCTCTGGTCAGAGAGCTGGAGCACATGCAGGTCTGTAAA
GCCAGCAGGGTGCTAACAGGATGTCAACAGTCAACAGCGAGGCTGCTTCTAGAAAATGGC
TATCACACGTACATGCTTTAAGTGTTGCATTTATATTCCAATAATACGAATAAAATGAAG
TGACTTTTCCATTTCATGTTCAAGTTGAACAGGTTAGTCTGACGAAGGTCTTGGACCGAG
ACCATCCTGCTCATCAATGTTCTGCTGACTCTTATACAAATATGATTCATGTTACAGACT
GATGAGCAGAACCTGGTTCTGGGCCAAAAAGCCCAGATGCACCTCGAAAAGTACAACTTC
CCAGTCGAGATGATCGTAGCACTGCCCAACGGTACCATCGTAAGTAGCGCTGGCAGTGTA
AGATTTGAATATATGCATACTTAATTAGCAGAGATTACTATTAGTATGCTACTTCCATCA
CCCACCCAATAAGTATCCATGAGTGTAATTCTGCCTTGATTGAATTCCGTGTGACTTTTT
TTTACTGGTAATGGTTTCAGGTCCATGGGACTGGTATTTTTTTTTTACTGGTGATGGTTT
CAGGTCCATGTGACTGGTCTTTTAACTGGTTTTCAGGTCCACCACATCAACGCCAACAGC
TTCCTGGACGAGACGGCCATGAAGCCGGAGGAGGAGGATGCTGCGTTCAGCTTCTCGGCG
GGCTTTGAGGACCCGTCCACCTCCACCTACATGGCCTTCCTGAAGGAGGCCCTGCAGAGA
GCAGAAGAGTTCATGCAGTAGGAGCGTGTGTGTCCTCAGGAGCTGGTAGATTGAAGGTCA
ATTTCACTACACGATTATCAAGAACCTCATTTGAAATGTGGTCTTACCTGTGCACATTAA
TTACTCAAAGTGCAATAGTTGTGCAGCTCCTCCACACACTAATTGAGTCCTGTAAAATGC
TTCTAAATGTTTTTTTATTGAAACTTTTTTGAATCTCAAACATCATTGCGATAGCCACCG
AGTGAGTTATCCAGAGAAGTTATTTGCTTGAATTTGGAACTTGAAATAAGTAGTATGATT
GTGATTTCATCATGCAATATTTTGACTATCTCTAAAGACCATGTTCACAAAACTTAAAAG
AAAAAGTCTTGGCTATTTGCCTGAATCTGTTTATTGTAACATTCAGATTGCCATTAGATT
TTCTGCCAAAAAAAACAATTGCACCATCATTTGATATTGCAGCTGTGTGTATAACATTTA
ATAATAGGCGAACTTGTTATATAATTATATATACATTTCATAAGAAGTCCTTTCCTGTTG
TTGGTCTCAGTAGTTTATGAAGGCCTCGTCTGAAAGCTTTGGCCGGATGAGGCCTGATGT
CTCTGCTGAAGC
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