SelenoDB
Release 2.0
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Transcript Report for SPT00000996_2.0
Identity
TranscriptSelenoprotein N (SelN)
SpeciesGadus morhua (Cod)
Transcript IDSPT00000996
Transcript release2.0
External IDNone
Gene SPG00000900_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000996_2.0 # Transcript # Selenoprotein N (SelN) # Cod (Gadus morhua) # Full length # Reverse
GCTTCAGCAGAGACATCAGGCCTCATCCGGCCAAAGCTTTCAGACGAGGCCTTCATAAAC
TACTGAGACCAACAACAGGAAAGGACTTCTTATGAAATGTATATATAATTATATAACAAG
TTCGCCTATTATTAAATGTTATACACACAGCTGCAATATCAAATGATGGTGCAATTGTTT
TTTTTGGCAGAAAATCTAATGGCAATCTGAATGTTACAATAAACAGATTCAGGCAAATAG
CCAAGACTTTTTCTTTTAAGTTTTGTGAACATGGTCTTTAGAGATAGTCAAAATATTGCA
TGATGAAATCACAATCATACTACTTATTTCAAGTTCCAAATTCAAGCAAATAACTTCTCT
GGATAACTCACTCGGTGGCTATCGCAATGATGTTTGAGATTCAAAAAAGTTTCAATAAAA
AAACATTTAGAAGCATTTTACAGGACTCAATTAGTGTGTGGAGGAGCTGCACAACTATTG
CACTTTGAGTAATTAATGTGCACAGGTAAGACCACATTTCAAATGAGGTTCTTGATAATC
GTGTAGTGAAATTGACCTTCAATCTACCAGCTCCTGAGGACACACACGCTCCTACTGCAT
GAACTCTTCTGCTCTCTGCAGGGCCTCCTTCAGGAAGGCCATGTAGGTGGAGGTGGACGG
GTCCTCAAAGCCCGCCGAGAAGCTGAACGCAGCATCCTCCTCCTCCGGCTTCATGGCCGT
CTCGTCCAGGAAGCTGTTGGCGTTGATGTGGTGGACCTGAAAACCAGTTAAAAGACCAGT
CACATGGACCTGAAACCATCACCAGTAAAAAAAAAATACCAGTCCCATGGACCTGAAACC
ATTACCAGTAAAAAAAAGTCACACGGAATTCAATCAAGGCAGAATTACACTCATGGATAC
TTATTGGGTGGGTGATGGAAGTAGCATACTAATAGTAATCTCTGCTAATTAAGTATGCAT
ATATTCAAATCTTACACTGCCAGCGCTACTTACGATGGTACCGTTGGGCAGTGCTACGAT
CATCTCGACTGGGAAGTTGTACTTTTCGAGGTGCATCTGGGCTTTTTGGCCCAGAACCAG
GTTCTGCTCATCAGTCTGTAACATGAATCATATTTGTATAAGAGTCAGCAGAACATTGAT
GAGCAGGATGGTCTCGGTCCAAGACCTTCGTCAGACTAACCTGTTCAACTTGAACATGAA
ATGGAAAAGTCACTTCATTTTATTCGTATTATTGGAATATAAATGCAACACTTAAAGCAT
GTACGTGTGATAGCCATTTTCTAGAAGCAGCCTCGCTGTTGACTGTTGACATCCTGTTAG
CACCCTGCTGGCTTTACAGACCTGCATGTGCTCCAGCTCTCTGACCAGAGACCAGCTGCT
GATGAAGCTGTGGTTCAGCAGGGCGAGGACGGGCGGGCTCTCCAGGACCGTCTCCCGGAG
GGTCCGCCCAGAACCTACCGGAAGAGAAAAGAAGAGAGCGGAGGTGAGCCAACAGAAGGC
CCTGAGTTGAGGTGAAGCCAACAACGGTCCTCTTTAACCCGGTTCTAGGACTAGCACGTT
CCATTTCAACTAGGGGGTGGGGGGGTCATATTTCAGAAATGTTAACTGGCATCCTGCTGT
CAGATACGTGGTTTACGCGGTACAACTCCACTTCTAACTGGACATGCTACAGTCGCTAAA
TACCGCGTAATGCGTTGTAATGGACTGCTACTGCCAACAAGGTTAACAATAACTTTCCCT
GCTAGAAATGGTATTGCTATGAGTTTCTTTTTCTCTCAGATATTGAGTAGCCTACGAGAG
CTGAGAGTGTAGTCACCTCAGCAGGACTGGTCGTCCAGCGCGCCCCAGAGCACGATGGAG
TGCACCAGCTTGTGTTCGGCCCCGGCGCGCTCGAACGCCTCCGGGAGGGGCAGGTAGGAC
ACCTGGGAACACAGTCACTTTGTCAGGATCTGCTAGACTCCTTCTTGAAAAGGGGGCAGA
AGGGGACCTCCGGGGCTGGTGGTAACGTACCTTCTTGAAGGGGTAGAAGGTGACCCCCAG
GTGGCGCTGCGCCTCCTGCTGGCTGACCTCGGCGGTCCAGTGGATGTCCTCGAAGACGAA
GTGGATGGGCTCCGGGCCGCGGCTCTCCACCATACGGCCCTCCTCGTCCGTGACGAACGG
GGGCGTGGACGGGCCGCTGGACAGGAGCTCCAGCTGTAGACCAACATAGAATAGAATTCA
TCCACTCGGCCTCCCTTGAGGGGGTCCGATGACGTGAGAGTTCCCGCACATGGTTCAGCT
CGGTCCTGCTGGCTGTAAAGAACTATGTAGAAGTAACCCATAGCCTCCCATGTCCAACCA
CGGAGAGGTTCTCTACGTCAACACAGAGCATGGGATTTGTCCCGCTGTTTGTAGACCTTC
CAGAGCGTTAACGCTTCATAGTAACATAATTTGGGTTGCCCTGGTCTCAGATGCTTCTTC
TATGCGCATAAAGCATTTTGGACGTCTGGGTTAATGTGTCAAGACGAGGACCTCATTCAT
AAAATATGTTTTGTGGAACATGGATTGCTTGTTAAGTGGTTTCCTGCAGACGTACCTGAG
GCAGGAAGCCAATGTCCACCTCCATGTTGCTGCTCTCGCTGCCTCCATACAGCCACTCCA
TGTCCACGTTCAGAGGCCTGTGGAGACATGAAGATCAGGACATGTGTGATCTAGGACATG
TATGATCTAGGACAGGTGTGATCTTGGACAGATGTGATCTAGGACAGGTTCCCGGTGGAG
GTTCATGGAGAACCTGGATGAAGGCCTACCTGTCGTTGGGGACGTAGAGGTGAAAGTGGC
GGACGTGAGAGGCGTCCTTTGAGATGATGATGTTTCCGGTGAACTGGCCTGGAGTGAACC
AGAAAGGGAAGTCTGGAACCTCGTTGAGCTGGAACTCTGCATGCACCCTGCAGCGGTGGA
GAGCAAGAGAGAGAGGCACCCTTTACACGTCAGCAGACAGAAGATAAACCCAGGGTTCAG
AGACAGCGATCAAATATTGAATAGGCAAATGCATCGTGTTGAAATGCAGTCCAATAGTTG
ACACCTTCTGGAAAACATGTTTATAATATGTTGACCTCATATCCAGAACCCCCTCAGCTG
AAGACGATGTCGTAGTAGAAGTCACTGGACCCCTCACCTGAAGACGATGTCGTAGTAGAA
GTCACTGGACCCCTCACCTGAAGACGATGTCGTAGTAGAAGTCACTGGTGGCCCGCAGAC
AGGCCACTGTGCCCTGCGGGGCGAAGCGGGACTTGACGAAGGGCCGCGGGTGGAACATGC
TCAGCAGGGAGTGGAGGAACACCTGCTGGGAGCACAACACCTCGTTAGTCACGGGCCGGA
CTAGACTTGGGTCAAAGGTCAACACGCCCGAGGGCATCACCTCTTTGCCCTTAGGGGGGG
GCGGGTTGTAGCGGTTGTTGGGCAGGTACCCCGTGAAGATGTTGAGCTCGCTGGGGATCA
CCCACCAGGTGTCCCCCACCTCATGCTTGTTCTTCGGTGGCAGGAAAACCCTGAACTGGC
CAGCGGAGAAGGTAGAGGAGGGCGTGGCCGGGGCCCTCCAGGCACGGAGCCCACTCAGGG
AGCTGTGGGTCACCTGGAACGAGATGGAAGACAGGATGTTTTTATAGGCATGAGGATTTA
ATGAAGCCTGCTGAGCAGTTGCCCTTAACAACATACATGAGAAACACTAAATGTTTGAGG
CATGTCATTATGCAACTCTTTGAATATAAGTCTATATATATACATATATAATGTAGAGTC
CAGTATATAATGTAATAAGACAAATTATATTATGCACAAGAGGCAACTCTTTCTCTTTTT
AATCAGAATGCAGTTCTCATTACGCCAATTTATAACATGTGGCATGTAAACTTATATTAG
TTTCAGACGGAGGTTAGCGGTTTTCCCAGAGTGTCTCTCTCACACAGCGTTGCCACTGTG
AGGCTGAATTCCAACCAAAAGAGAGAACTGAATTCCCTGTTCCACTTTAGCTGCTGGGCG
TCGTACCCCCAGAAAGCCGTCCTTGCTCTTGGTCATGGAGTCCATCTGCAGAGGCTGCAT
GGTCGCCTCCAGCACCAGAGTCTCTCCGTTTGGGTCATGGCTCTCCTCCTCTTCAAACTC
TCCTGGAGAGGTAATCCCTGGAGAAAAGTCAGAGAAGGCATCACTTATCGATACCAGAGT
GTATATCACAAGGCTAAGGCAAGAGGGCGAGAGTCTGAGGCAGAAGGATGAACGTAATGG
GGACGTACCAGTGAGTTTCTCCGCAATAGGTCTGAACTCCTCTGGACTGAGATATGAATC
TTGGTCCGTGTCCAGGGAGCTGAAGAGGAAAAGGCCCTCTGCTCCCAGGATCTTCAGGCT
CTCCTCCTATTGGGGAACACATGCATCCCTGATTGGCTCAATATGGCAACATGGCATAGA
TGTAGATTGTATAGCTTAAACGCATTCCAAACGTGCTTTACACAGTAAATGCGAGGACTG
GCAGGTTCGTCCATTTACTGCGTGCAGCTGTGCAGACCAAGAACCCCCCCCCCCCTAGTA
AACACACTTCACACTCAGGAGGTACGGTTGTTCCTATCGAGGTGCGTGGCAGGGAGATGT
AGGGCATTATTTAAGAACATCTGGAGAATAGAAAAATGTACCATGACGATATTGGAGCCT
ACTTGATATAACACACTTGTATCTACGTATGCGTTCTTAAAGTATACTTACATGTCGTTT
AAGTTGCTGACCATCCTGGTAATATTTTATGCCAAAAGCTAGAACAGGGACTACAGCAAA
CACCGCCAGCGCAGCAAGCGCCCGGGTGATCCACGAACCCCTTTTCGCGGCAGAGGGCGG
CCCACCGAGCCCCCGTCCCCCGGGGTCGGGCTGCTCTTCCCGGTCTGTTCCTTGATCCAC
GTCTCCGGCCAT
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