SelenoDB
Release 2.0
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Transcript Report for SPT00001014_2.0
Identity
TranscriptSelenoprotein W (SelW)
SpeciesGadus morhua (Cod)
Transcript IDSPT00001014
Transcript release2.0
External IDNone
Gene SPG00000918_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001014_2.0 # Transcript # Selenoprotein W (SelW) # Cod (Gadus morhua) # Full length # Forward
ATGAAGGTTCACGTTGAATACTGGTGAGTAACGTTCACAGTGCGACTCGTTGAATCCGTT
TCACACAGAACAGTCTTTATTAACAGTTCTGATCGTTTTCCAGCGGAGGATGAGGCTTCA
GAAGCCGCTTCACGCGGCTAGAAGCGGCCATCAAGAAGGCCATCCCCGACGCGGAGGTGA
CGGGGTCCGTGGGTCGTGCCCGTAAGTCCGCTGACTTTACGCACAACAGCTCTTGTTTTT
GGACACTTTACTTTCGGATGGGACTAGAACTGCGCATGTGTTCTTTACGGCCTATAAACC
CACAAACTTCTAAATAATTTTTATCGATTTTGTTTTCTCCATTTCAGAGAGTTTTGAGGT
GACAGTTAACGGACAACTGGTGTTCTCCAAACTGCAGACCGGGAGTTTCCCTGACGATAC
CAAGGTAAGAGAACCGTCCTGTTGGCACCGCGCACCTCGCTCCGCGCAGACACAAAAGAT
GCATCACATTAGCAAACCTCAACCTTAACGGCCTCCAAGTCTGTTTTACCCCAGCTGACC
CCTAACTGAGTAGGTAGGGCTACGAGGAGCGCACCACGCACGAGTCGCTCTCGACACGGC
CCTACGAGCTCAGCAGACTCTACTTCAGAAGGTTAAACCAGTCCATCCCTGATCAGACAG
ACCAGTTCAGGCGTAGGCTTCCATACACTATAAGCTGAGCAGGGACTGCGCGGAAAATTA
TGCAAAACGAGCAATAGTGTCTCTCTGCCTGACAGGTCTTTGCCTCTGCTCAAACCTCCC
TGAGGAAGTGAGTCTACTCTTAAGATGTTATTAACTTAGTCCTGGTCTACTCTTAACAGT
TATTAACTTAGACCTGGTCTACTCTTAGATGTTATTAACTTACTCTTTGATATGAATATT
TTGGCACCTTTTTCATATTTTAGGCTTCCTTTACCTAAGTGTGTAAAACCTTTACGTTGA
GGTAAAAACTATCATGTTCTCACGTGTTTATGTTCTGGAAGGGAAATGTACATTTTAAGA
CAATCCTTGTCCAAACTTGTCTTAAACTTGTCAGAAGATATCTTGCAATGATTCATTAAT
GTAACTAATAACCGGCCAACTTCACAAGTAGCCCTTCACGCAATTGGGCGTCAGTTTGTT
TTTAGAAGTGGTGGGGACAATAACCATAAGCTTGAGTGTGGTTTGAAAAGTGCTGGGTAC
TAGGGTTGCCGCGGTATACGGTATTACCGGTAACACCGAGTTATTATTTTTTTTTTTCAG
TAATAAAAAAAATATCTGTCAAAGTTAATAATATAATTAAGAAAATATAAATTTGTAAAA
TAGGCCATAGTTCTGCTCTGTGCGGAAGATAATTGGCGTGCTTCCTTACAGGACCGGTAA
CCTTACAAACCCGCGAAACCCAATCCCTACGAGAGCTCCCCCCGCTACGGCCATCCGGAG
GCGCGCAGAGCTTTTTGCCGTGAAATTATCTATAAAATTATATTATACTTAAGCAATAGA
TCACGCCAGGCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTATATATAGAACGTTATAAGACGCCGAGA
ATTGGCGCGCTGTCACCGAGTGTGAGAGGAGAGTTGACGGAGAAGATGGCGGTTGACCTA
GTTTCAAAGTTTATACTGTTTATACTTTGTAATACCGGTTTTGACACAAGTGTATTACTT
GGTGTGAAAATGTCCACACCGCGACAACTCTACTGGGTACCCTTATGTAAGCTAATCATC
CATTCAACGCTGCATTACAAGTGTATTGTCAGGTGTTGAAAATCCTATTCGAACAATAAA
AGTTGAAAAACACAGTTTGTGTTTTGGCTTGTTTTGCAAAACAGCGTTGGAAACACCAGG
GTATTGGCTCGGGATATACCATAAGCAAATTGCCCGCAAATAAAATAAATAAAATGTTGT
ATTTTAAATAGTGGTGGGGACATGTCCCCCGTAATCTACGCCTATACCTTCACGTCAGAC
CTAGAACAGTAGACATTAGACTGTAATTGAGCCTGTTATACGTCCATGGAGTTCCACTGG
TTTGACCAATATGAAGGCTTACATTCAACTGGCATTAATATAAATCAGTTTCCAGTATTC
TCGGTAGTTGAATAGTTGAATGTATTCTTCAAACGTTTTTATTCCTGTGTGTTTCCTGAC
CAGGTGGTGAGGCAGCTGATGGCGATGAAGACCCCCCAGGCCTACCAGCGGCCCCCCCAG
ACCGCCCATAGGGGGGGGTGACGTTAAAGAACATTTCCTTACTGGAAATGTTAAGGCTGT
TTCCTATCAGAAGAGAACATCTGTTTTTATTGTCCATTGATCCGTTTGTTTTCTCGTTCG
ACCATAAACCAGGAAGAGAGAGAGTGGTGAGTTCAAAGTCAATCAGGTTTTAATCTCGTT
CGGAGGCCTGTGGTCCTGAAGGATGAGCAGGCCTCCTGAACAACGATATGAAAACAGAAC
TTCCTCCTCTCTAGCCACAGTCATGTTATCCATCGTTTAAACTGACTGAGTAGTATTCCC
TTTAAGTTGGCCCCTCATGTTATCCAAGGGCTCCAACGCTGAGATTCAAATGTTCCTTCA
ATATCAAAGGAACAGATTTTGTGTTCTGTGGTGAGTTCAGCCGCCCCCCCGACCCAGCAG
CTCCTTAGTGGGCCACTGAGCCGCCTGTTAATGACTGATCATACTTAAAAACTACGTTTG
GTGTGACCATGATGCTTCAGGTAGTCT
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