SelenoDB
Release 2.0
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Transcript Report for SPT00001078_2.0
Identity
TranscriptSECIS binding protein 2 (SBP2)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001078
Transcript release2.0
External IDNone
Gene SPG00000982_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001078_2.0 # Transcript # SECIS binding protein 2 (SBP2) # Stickleback (Gasterosteus aculeatus) # Full length # Forward
GGCAAGAAAAGCAAAGTTCCCGTTCAGCTGGACATCGGAAACATGTTGGTCGCCCTCGAA
ATGAAGCAATCCCAAAAAGTAAAGCCGGACGCCAAACCGGTCATTCTCTCAGGTGGGCAT
CTGATACGAAGGCTTCCTAATTTCCTTGATAAAGATTATTAGAATAATATATTTAGCTTG
ATGGATGGAACCGTAGCCCAGAATAAGTCTCTTTTTAAATGCTCCATTGGCAGTTGGTGG
CGGACTGACCGTTGTCCAGAAGCAGAAGAAGCTGCCCTCGCACCAGGATAAAATTGCACA
CAATCCTCTGGACTCCACCTGCCCTTTGGTAAAGAAAGGCAAGCAGAGAGAGGTGCCCAA
GGCCAAGAAACCCTCCCCTCTCAAAAAGGCATGCCCACATACGTACTCTGTACCAAGTAA
CGCTGCACAACATTTACTGAGAAGGTATTTTCAGCTGTGCGGCCTTTTATTTCTTTCTTT
TTTCTTCTCTTTCTCAGGTAATTTTGAAAGAACGGGAGGAGAGGAAACTAAAACGTCTGC
TGGAAGAGAGGGGACTGCCTTTGGAATGCGAGTTCACACCTGCTAATGATGGTGATGTTG
ATGCTGCAGAAGAAGGAGGACCGGTCGAAACAAATGCCACAGGTTGGATCGAGCACGCAA
AACATGCTTTTGAGGAAGACGATTGAGGAAATCACTGACTGGTAGCTCATATTTGACTTG
TCGTCTGCAGCCTCCGATGAGGTTGGAAGTCCGAAAGAAGAACTTGAGGATCGGTCCGAC
TTTAACGGCGCAGAGCAGGTGGTGAACAAGGCTGACGAAGAGGCCGACAAAGACAAAATC
GTGGAGCAACGGACCATCTCACCTGTGCCCTGCCCAGCCAGTCGACCCAAAATCCACAGC
AGAAAGTTCAGAGAGTAAGACCGTAAACTCCTCACAATTTGTAATGTTCGTTGGCTGTGC
AGAAAACTGAAAAACATTTCATCACTGTTTTTATTCTCAAGTCTTTGGCAACTGTATATT
GTAAAAGTATGCCATATTGTTGTGCATGTCAGTTATTGCAGTCAGATGCTGAGCAAAGAC
GTGGATGAATGTGTGACGGCTCTCCTAAAGGAGCTGGTTCGTTTCCAGGACCGCCTGTAC
CAAAAGGACCCCATGAAGGCCCGCATGAAACGACGCATTGTGATGGGGCTCAGGGAGGTT
CTGAAGCACCTCAAACTCAGGAAGGTCAAGTGTGTCATCCTCTCGCCCAACTGTGAACGC
ATCCAGTCCAAAGGTACTCTCACAGTGGCACCGCTGCAAGATTGTGTGTGTTTCTGTTCG
ACAAATGACTGAAACAATTGATTGCCCCGAAAACCGCAAACTGTATTCGTTCTGCTTGTT
TTTGGGATGATCCCCAGCCAAACATCCAAGCCTCTTAATCTCCTTGCTCTTTTGACAAAG
AAATGTGTTGACTAGAGGTTAGAGAAAGTCGCCTTCTTCGTTTTCCGTTTCATCCTCTAC
GGATAGAATTTTAGCACTATTATAGCAGCTTAGTGTGGACATATGGCCATAGGTGAGAGA
AACAGATTCCATAGCAGATTTATAATTGACTCAATTAAACCCAGGGGGGGAAAAAGCCCC
ACTAGGTTCTTAAGAAATGTCCCTTTTCATAGGCGGCCTGGACGAGGCTCTTTACACCAT
CATCGACACCTGTCGGGAACAGGGCGTCCCGTTCGTGTTCGCCCTCTCCAGGAAAGCTCT
AGGTCGCTGCGTCAACAAGGCCGTGCCTGTCAGCCTGGTGGGCATCTTCAACTACGATGG
TGCACAGGTGCAGTACGATACGTGCTACTGTTCCAGACGTGAGCGGTGATCTCACAACCA
CTCACCTTTCAATGCACAACATTAAGAAGAAACCTGAGCAGCTTTTCTGTCTCACCCACA
GGACTTCTACCATAAGATGATCGAGTTGTCGTCTGAGGCCAGGAGAGCCTACGAGGTGAT
GGTGTCCAGCCTGGAGCAGACGGGCCAGGCGGACCCGGAGAGCGTTGAGGAGAAGCTGCA
GATCAGCAGCGCGGCTGAGGAAGCTGAGCTCGGACGTGACATCACACCGCCAGAGGAGCC
AGAGTACAGTGAGTTTAGTCCTCCCCCAATATCTGTGACAGCTGCTCTTTAAATGGATTT
GGTCTTAGGTTTGATTATGTCCCCCCTGGCCTCCATTGGAGGTCAAGTCCAAGTCAAATC
ATTCTCTTTTTGTATTTCTTTCTCCAGTGAAAATCTGGAAGAAAATGCTGGAGAAGGATT
ACAACCACAAATTCCTGAACTTTGAGGAG
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