SelenoDB
Release 2.0
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Transcript Report for SPT00001082_2.0
Identity
TranscriptSelenocysteine synthase (SecS)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001082
Transcript release2.0
External IDNone
Gene SPG00000986_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001082_2.0 # Transcript # Selenocysteine synthase (SecS) # Stickleback (Gasterosteus aculeatus) # Full length # Forward
ATGAACAGCGAAAACTTCAGCCTGGGTGAGAAGATCGTGTCCACCTCGTACATTCGACAG
GGCAGCCAGGCGCGCCGCGGCCATGAGCAGCTCATCAGACATCTACTGGAGCAGGTGCGG
TCTACAGCTGCGCTCGTGTTTCCTCGAGTCACTGCGGATTCATCCAATTTGCGTGTTGCG
TGTGTTTGCAGGGGAAGTGTCCAGAGGACGGCTGGACTGAGAGCACCATCGAGCTCTTCC
TGAATGAGCTGGCCGTGATGGACAGCAATAACTTCCTTGGCAACTGCGGCGTGGGAGAGC
GGGAGGGCCGGGTGGCGTCCAGCCTCGTGGCGAGACGACATTACAGGTTCAAGTTTGACA
ATCAGTCCCTCAACGTCTGACTCTTTGTGTAGGAGTTTACATTTTATCGAAGGAACCCAT
GGATGCGGCCAATGAGGAATTGTGAATAATGAATGAAAATAAGAAATCTTAAATCGAGGC
CAAATCAAGGCATCTCACTAGCTTACCAGCCAATGTAAACACTGGTACTGATTTACCTAA
AAAAGTAAACAAGCCAACTGGTGACCAGTGAAGTGCCGTATTTGGATGCCTCAATTTAAG
AACGTTGTTTCGAGTCTTCGGTTGTTACAGCTGGCTGTTTTATGCAGGTTGATCCATGGC
ATAGGTCGGTCAGGTGACATCGCTGCTATTCAGCCCAAAGCTGCAGGATCCAGTCTGCTA
AACAAGCTGACCAATTCCGTGGTGTTGGACATCTTAAAGCTCACCGGTGTGTACATTTTG
ACATTCTAACTGAAGGAAATTTCATATTTGTTTTTGTTTTTCAGCCACCAAACCATTTAA
ATGTGTTTTTTAATCAGGCGCTTCCATTAAAAAGAATAGAGGGTAAATAGAAAACTATAA
AAACATGCTTTGTTTCTTCCGCCCGCAGGTGTCCGGAGTGCGGCGAGCTGCTTTGTAGTT
CCCATGGCAACAGGAATGAGCTTGACTCTGTGCTTCCTGACTCTGCGCCATCGAAGGCCC
AAAGCCCGTTACATCATTTGGCCTCGCATCGACCAGAAGTCCTGCTTCAAAGCCATGATC
ACAGCAGGTGACGCTGACGTCAATATCCGATGTCCCTTCACTCCTCCACCCGCTTCAGAC
TGCATTAGTGTTGGAAACATGGCAGCGGATGGCCATTGTGCAGAGTTATTTCTGAATGCC
ACGTAAAGTGATATGTGCTAATTATCCCCCCCGTATGCCAGGCAAAATTGGGCTTCTTGC
TCTTAGAAACACACACACACACACACACACACACGCAGTAACACCTTAGGTGGGGGTCTC
TGGCTTATTTCTGACTGTTTCAACAGGCTTTGAACCGGTGGTGGTGGAGAACGTTCTTGA
GGGCGATGAGTTGCGGACGGACGTGGAAGCGGTTGAACGCACGATCGAAGAACTCGGAGC
CGATAACGTCTTGTGTATTCATTCGACAACATCCTGCTTTGCCCCGCGTGTCCCCGACAG
GTAATGCTCGCTTTAACTGACCCTTTTATTACGTTGTAGACGTCACAGTAGTCGATTTAT
AAATACAAGTCATTCATTATCTTGTCTTCTAGGCTTGAGGAACTGGCTGCTCTGTGTGCC
AAACATAATATTCCCCACATAGTTAACAATGCATACGGAGTCCAGTCGTCCAAATGCATG
CACCTTATACAGCAGGTTAGTATCCTCAATACATCTCTCATTTGTGTATTTCATCATGTA
CTTTAGTCATTTCTGGCACATACGGTGGTTGCTTAGTATTTTCCCTGGTGGTCTTTGAAC
AGGGGTCTCGTGTGGGAAGAATCGACGCCTTTGTGCAAAGCTTGGACAAGAACTTCATGG
TTCCAGTAGGTGGCGCCATTATCGCGGGTTTTGATGAGTCCTTCGTACAGGAGATAAGCA
AGATGTACCCAGGTGAGTAGCAGCAGTACTATGGCCGAGCTATACAAGTGACAATGTGGA
GGTTATTGATTCGAATACTAGATAAGTGGCTCTGTATTTAATACTTTTAGAAGAATGTTA
GTGACGGAACCCAGTGCAGCAGCGTTTTCACAGGTCAATGGAGCTCTATGACACAAAGCA
ATATGTCATATTAGGCTCAGGTTAAGCTGACCACAGGATAAATATAGAGTGACACCAGAA
CTATATTTCAAAGAACGTGTCAACTCAACTGAAAAGCTCAGCACCTCCTCTTTGGCGGCT
TTTGACATTCAGTGAAACAAATGGGATCGATAACCACCCCTCGGCGTGCGTATTCAGTTT
CATTTTAGATGTTCAGAGAAGGACTCAGTGAGACAAAGCTGTCACCTGGTGTTGCCACAG
AGACATGCATGTGACGCTTCACCTTGACGGCGCCTGGTGCTTCTTTTCTTGGTGAATGTC
AGGACCGAATGTGTGTGCTTCTAGTTATGTTTGTTTGTGCACACATTGCGGCGTAACCAA
GCCACTCGTCGGGCTCTTGTGTCCAGGTCGAGCGTCCGCTTCGCCTTCTCTGGACGTCCT
CATTACCCTTCTCACTCTGGGAGCCAACGGCTACAAGAAACTCCTCTCGGAGCGAAAGGT
GAGCAGATGAACAGGTCACCTTATCGTGCAATATATAGTTTGTGCCTCAGGTGGGGTGTG
AAGGCTGCAGGATGCTTCCAGGTGATAGAAACACCATGGATGGGTATAAAAGCACTGCGG
CAATGTCAGTCCTGGTATTTTTATATGCATGCTGTGTCAACAGCTTTCCCCTGAAGACCG
AATAGGACAGCTTACATAAGTTGTATTAAATTGCAGTGGATCACATGCTCTGACTGGCCG
CATGCAGGTGTGGGTGGCCCGTGTGTGAGTCTGTGTGGAGCCCTCTCCCTCCATTCTGAC
CGAGGACTGAGACTTCCAACTGCTCAGCGAGCAATGAGCGCTGGGTAGGGAGGATCATGC
TATAGGATGATGAAAGGGATCCAGAAGCTTCAGAAAACATCCACCTCCTTGGTTCAAAGC
AGACTCGCTCACATGCAGCAGCTCCCTCTTCAAATGGAAAGCACTGCAGCACTGTCACGC
CTCGACAGCGGCTGTGTCATAAATCCACAGTATGGACTGTGAACCGGACTGAGTTTGTTT
CTGCCAACGCTCTGATTTCTGGAAGATACAGAAACACATTATTTGTCTTTAATGTTCAAA
AAGTGGAAGGGGAGATTTTTCAGATAGAATCCCAGATGGATTCTATCATGTTTTTTGACA
CGCACCCTAGTGCAACCCCTCAAGAGTACATTAGGTAATTACAAACCTCTGCTAAACTTG
GCATACTTAAAGGGGCGGCATTAAATACCCAAATATGATCTGCATGAAACCACATCTGTT
GCAAAAGTATACATCTAGGACATACCTCCGGCCTCTCGCAGGATCCGGACCTATCAGGGC
TCTATTGATTTCTCTGGGTCCACATGATGCATTATTGATGTACAGGACCAGTTTTCCATG
GTGTCTGCAGAACTGAGTGATTTCCTCACATCGCCGACACAGGGTCAAAAGCTTTAAATA
ATTCAGACATCGCATCTGTTGGGATTCATTTACAGCCTCATGTAACCATTTATTAAAAAA
AAAAAAATCTTTTAAGAGCTGGCAGACGATGTGTGTCTTCTTAGTCAAAAACACACACAA
ACACACACACACACACACACTTATTGTGTGCAGAGTCGTGGCGGTGCACTATCTCTGCCA
CTTGCACCCCTCCTCTCCAAAGATGGTCAAGTCCCCCTTTGTTACAAGAGAACAAGAGAC
ACTTGGAGACACTTTACAACACTGAAAGGCGGCTTGTGTTCGAGTCTTGTGAAAATATTT
TCCTCCTTGGTGTTTTCAAATATGGACGGTATGAGTCAGCAGAGAAGGCAGGAGACGCAG
ACACACACAAACACGCACACTGTTCCAGAGAGCCGATCTTAGAGTGGTCAGCGCCTCGCT
ATACGGAACCCGGGCCAGCAACAAAAACCCAGCTGTTTTATTTGTGGAGCACATTTCTGG
CCTGTGCTGATGGCATCTGTGTCCATTTCCCGTTTTCATTCTGCGTCATCCTATTTTAAT
CGACGTTTAAGTCTCAGGATTAAATCATGCGTTGCTCTTCCCAGAGGTGGATGTGTGATG
TGGTTGAAGGTCCTGGCCACACCGGGTGATGAAGAGGAAGTGGAAACATTGCTTATGTTG
GAGCTTGGAGGGAAACGCACACAGTCAGGCAAATGCAGAGATGGGAACGGGGGGGGGGTT
GGATGTGGACCGGTCTGCTTGTGGGTAGAAATGCTTTGATTAGCAGAAAAGAAAGGTTGC
TTCTGCTGCTAAAATAAGCGTGTGAAAGGATCACTGTGCTACTATTTATAGTTGTTTCTC
GTGGTCTCCGGCTCCCCCTGGTTCTGGTCTTAAGTTAGCTTCTCTGTGTCTGCATGTCCT
GCAGGAGATTTATTTGTTCCTGTCCCAGGAGCTGAAGAGTCTAGCCTCGGCACACGGGGA
GAGATTGCTTCACACCCCACATAACCCCATTTCTCTGGGTAAGCTCAGTTCACTGGCTTC
AGACCAGCAGCTCTTCAGACTGTTCTGTCCATGCACATTGACTTTTGTCGTGTGTGTGTG
TGTGTGTGTGTGTGATTCATTCATTGGGTGTGGCTCCTCTCTCTTCCAGCCATGTCTCTG
GACGGTCTGCAGGCCGAGAGCGACAAGGCGGTGACTCAGCTGGGCTCCATGTTGTTCACC
CGCCAAGTGTCAGGAGCCAGGTATGAAAACTTTTAAAAGGGCTTCGCCACACCCAGAGAT
GGGGTTTGTCTGCGTCGTCGGAAAATGCGTATATGAGCTATGCGTTGCCAAGCAAGATGG
CCAGTGGGCGTGAGCAATCAGCCAGATGGATCTGCTGTATCTGGCAGGGTGGTGGTGGTG
GGGGGGAAGCTACTTTAGACGATTACACTGCCCCATCCTATCAGGACCGCCTCGCAATTT
AACAGCTTATTTCCGCCTCGAGCCACAGAGCGGTGTTGTCTCCACGGGGACGGCGGCACA
GACGGTCCCAGCCGTGTTCTCACTCCCTCTGGTAGTGCTTCTCCCAAGCAGGAGGGACAG
GGGTCTTTTCTTTTTGTCCTTCTCTTTTTTTTTTTTCTGCTTCGTGGCTGATGAAACGAA
CCAATGTGCCTTTCTTTCTTTTTCCATTTTCCCCTTCAACGGGTTTATGAACAAGCAAGG
GAGCCCATCTAAATATTTTAAATATCCCAAATGAATCATTTATTTGGGTCAATATGCCGT
AGTTGTTTTGTGTTCAGTTTCTGTTTTAATGCACATTCATTTTCTGGTATCTTTTGCTGT
GAGTGAGAGGCAGTTATTCAACATAACCTTTCGACATTTAATTGCAATGCTTCTCTCTAC
CATGAAGGTCGCTGATATCAGCGGTCTCTAACAGCCCGACAGAAATTCTTTTCTCATTTA
AGTGATTTTAAACTGCCGACTGTGGCGCCGGGCCTACAAACCAAAGCGTCGTACGTCTTG
CTTGAAATATCTGCTTATGAAACACTTTACGGTTGCAGTTGGTTGAGAATTTAATAATCG
TTTATGGTTTTGTTAAAAAAAATAGTTTCATAGATCTTGGCTAATTAGACAAGTTTGTTT
GCTAATGTTTTGTAAATCTCTTATTAGATATCTTCATTGCTATTCTGGAATAATCAGTAT
TTTACCCTGTTGTCCCTGTTTTTCCCCATTGTTTTTTTTTTTTTTTTTTTTCAAGGGTAA
TACCGCTGGGTAAAGAGCAGACCATAAATGGACACCGGTTCCTGGGCTTTATGTCCCACT
CTGAGGCTTACCCCTGTCCCTACCTTAACGCTGCCTCCGCTGTCGGCATCACCCGGGAGG
ACGTGACGCTGTGCATCAAGAGGCTCGACAAGTGCCTCAAGGCCCTGAAGAAAGAGGGA
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