SelenoDB
Release 2.0
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Transcript Report for SPT00001082_2.0
Identity
TranscriptSelenocysteine synthase (SecS)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001082
Transcript release2.0
External IDNone
Gene SPG00000986_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001082_2.0 # Transcript # Selenocysteine synthase (SecS) # Stickleback (Gasterosteus aculeatus) # Full length # Reverse
TCCCTCTTTCTTCAGGGCCTTGAGGCACTTGTCGAGCCTCTTGATGCACAGCGTCACGTC
CTCCCGGGTGATGCCGACAGCGGAGGCAGCGTTAAGGTAGGGACAGGGGTAAGCCTCAGA
GTGGGACATAAAGCCCAGGAACCGGTGTCCATTTATGGTCTGCTCTTTACCCAGCGGTAT
TACCCTTGAAAAAAAAAAAAAAAAAAAACAATGGGGAAAAACAGGGACAACAGGGTAAAA
TACTGATTATTCCAGAATAGCAATGAAGATATCTAATAAGAGATTTACAAAACATTAGCA
AACAAACTTGTCTAATTAGCCAAGATCTATGAAACTATTTTTTTTAACAAAACCATAAAC
GATTATTAAATTCTCAACCAACTGCAACCGTAAAGTGTTTCATAAGCAGATATTTCAAGC
AAGACGTACGACGCTTTGGTTTGTAGGCCCGGCGCCACAGTCGGCAGTTTAAAATCACTT
AAATGAGAAAAGAATTTCTGTCGGGCTGTTAGAGACCGCTGATATCAGCGACCTTCATGG
TAGAGAGAAGCATTGCAATTAAATGTCGAAAGGTTATGTTGAATAACTGCCTCTCACTCA
CAGCAAAAGATACCAGAAAATGAATGTGCATTAAAACAGAAACTGAACACAAAACAACTA
CGGCATATTGACCCAAATAAATGATTCATTTGGGATATTTAAAATATTTAGATGGGCTCC
CTTGCTTGTTCATAAACCCGTTGAAGGGGAAAATGGAAAAAGAAAGAAAGGCACATTGGT
TCGTTTCATCAGCCACGAAGCAGAAAAAAAAAAAAGAGAAGGACAAAAAGAAAAGACCCC
TGTCCCTCCTGCTTGGGAGAAGCACTACCAGAGGGAGTGAGAACACGGCTGGGACCGTCT
GTGCCGCCGTCCCCGTGGAGACAACACCGCTCTGTGGCTCGAGGCGGAAATAAGCTGTTA
AATTGCGAGGCGGTCCTGATAGGATGGGGCAGTGTAATCGTCTAAAGTAGCTTCCCCCCC
ACCACCACCACCCTGCCAGATACAGCAGATCCATCTGGCTGATTGCTCACGCCCACTGGC
CATCTTGCTTGGCAACGCATAGCTCATATACGCATTTTCCGACGACGCAGACAAACCCCA
TCTCTGGGTGTGGCGAAGCCCTTTTAAAAGTTTTCATACCTGGCTCCTGACACTTGGCGG
GTGAACAACATGGAGCCCAGCTGAGTCACCGCCTTGTCGCTCTCGGCCTGCAGACCGTCC
AGAGACATGGCTGGAAGAGAGAGGAGCCACACCCAATGAATGAATCACACACACACACAC
ACACACACACGACAAAAGTCAATGTGCATGGACAGAACAGTCTGAAGAGCTGCTGGTCTG
AAGCCAGTGAACTGAGCTTACCCAGAGAAATGGGGTTATGTGGGGTGTGAAGCAATCTCT
CCCCGTGTGCCGAGGCTAGACTCTTCAGCTCCTGGGACAGGAACAAATAAATCTCCTGCA
GGACATGCAGACACAGAGAAGCTAACTTAAGACCAGAACCAGGGGGAGCCGGAGACCACG
AGAAACAACTATAAATAGTAGCACAGTGATCCTTTCACACGCTTATTTTAGCAGCAGAAG
CAACCTTTCTTTTCTGCTAATCAAAGCATTTCTACCCACAAGCAGACCGGTCCACATCCA
ACCCCCCCCCCGTTCCCATCTCTGCATTTGCCTGACTGTGTGCGTTTCCCTCCAAGCTCC
AACATAAGCAATGTTTCCACTTCCTCTTCATCACCCGGTGTGGCCAGGACCTTCAACCAC
ATCACACATCCACCTCTGGGAAGAGCAACGCATGATTTAATCCTGAGACTTAAACGTCGA
TTAAAATAGGATGACGCAGAATGAAAACGGGAAATGGACACAGATGCCATCAGCACAGGC
CAGAAATGTGCTCCACAAATAAAACAGCTGGGTTTTTGTTGCTGGCCCGGGTTCCGTATA
GCGAGGCGCTGACCACTCTAAGATCGGCTCTCTGGAACAGTGTGCGTGTTTGTGTGTGTC
TGCGTCTCCTGCCTTCTCTGCTGACTCATACCGTCCATATTTGAAAACACCAAGGAGGAA
AATATTTTCACAAGACTCGAACACAAGCCGCCTTTCAGTGTTGTAAAGTGTCTCCAAGTG
TCTCTTGTTCTCTTGTAACAAAGGGGGACTTGACCATCTTTGGAGAGGAGGGGTGCAAGT
GGCAGAGATAGTGCACCGCCACGACTCTGCACACAATAAGTGTGTGTGTGTGTGTGTGTT
TGTGTGTGTTTTTGACTAAGAAGACACACATCGTCTGCCAGCTCTTAAAAGATTTTTTTT
TTTTTAATAAATGGTTACATGAGGCTGTAAATGAATCCCAACAGATGCGATGTCTGAATT
ATTTAAAGCTTTTGACCCTGTGTCGGCGATGTGAGGAAATCACTCAGTTCTGCAGACACC
ATGGAAAACTGGTCCTGTACATCAATAATGCATCATGTGGACCCAGAGAAATCAATAGAG
CCCTGATAGGTCCGGATCCTGCGAGAGGCCGGAGGTATGTCCTAGATGTATACTTTTGCA
ACAGATGTGGTTTCATGCAGATCATATTTGGGTATTTAATGCCGCCCCTTTAAGTATGCC
AAGTTTAGCAGAGGTTTGTAATTACCTAATGTACTCTTGAGGGGTTGCACTAGGGTGCGT
GTCAAAAAACATGATAGAATCCATCTGGGATTCTATCTGAAAAATCTCCCCTTCCACTTT
TTGAACATTAAAGACAAATAATGTGTTTCTGTATCTTCCAGAAATCAGAGCGTTGGCAGA
AACAAACTCAGTCCGGTTCACAGTCCATACTGTGGATTTATGACACAGCCGCTGTCGAGG
CGTGACAGTGCTGCAGTGCTTTCCATTTGAAGAGGGAGCTGCTGCATGTGAGCGAGTCTG
CTTTGAACCAAGGAGGTGGATGTTTTCTGAAGCTTCTGGATCCCTTTCATCATCCTATAG
CATGATCCTCCCTACCCAGCGCTCATTGCTCGCTGAGCAGTTGGAAGTCTCAGTCCTCGG
TCAGAATGGAGGGAGAGGGCTCCACACAGACTCACACACGGGCCACCCACACCTGCATGC
GGCCAGTCAGAGCATGTGATCCACTGCAATTTAATACAACTTATGTAAGCTGTCCTATTC
GGTCTTCAGGGGAAAGCTGTTGACACAGCATGCATATAAAAATACCAGGACTGACATTGC
CGCAGTGCTTTTATACCCATCCATGGTGTTTCTATCACCTGGAAGCATCCTGCAGCCTTC
ACACCCCACCTGAGGCACAAACTATATATTGCACGATAAGGTGACCTGTTCATCTGCTCA
CCTTTCGCTCCGAGAGGAGTTTCTTGTAGCCGTTGGCTCCCAGAGTGAGAAGGGTAATGA
GGACGTCCAGAGAAGGCGAAGCGGACGCTCGACCTGGACACAAGAGCCCGACGAGTGGCT
TGGTTACGCCGCAATGTGTGCACAAACAAACATAACTAGAAGCACACACATTCGGTCCTG
ACATTCACCAAGAAAAGAAGCACCAGGCGCCGTCAAGGTGAAGCGTCACATGCATGTCTC
TGTGGCAACACCAGGTGACAGCTTTGTCTCACTGAGTCCTTCTCTGAACATCTAAAATGA
AACTGAATACGCACGCCGAGGGGTGGTTATCGATCCCATTTGTTTCACTGAATGTCAAAA
GCCGCCAAAGAGGAGGTGCTGAGCTTTTCAGTTGAGTTGACACGTTCTTTGAAATATAGT
TCTGGTGTCACTCTATATTTATCCTGTGGTCAGCTTAACCTGAGCCTAATATGACATATT
GCTTTGTGTCATAGAGCTCCATTGACCTGTGAAAACGCTGCTGCACTGGGTTCCGTCACT
AACATTCTTCTAAAAGTATTAAATACAGAGCCACTTATCTAGTATTCGAATCAATAACCT
CCACATTGTCACTTGTATAGCTCGGCCATAGTACTGCTGCTACTCACCTGGGTACATCTT
GCTTATCTCCTGTACGAAGGACTCATCAAAACCCGCGATAATGGCGCCACCTACTGGAAC
CATGAAGTTCTTGTCCAAGCTTTGCACAAAGGCGTCGATTCTTCCCACACGAGACCCCTG
TTCAAAGACCACCAGGGAAAATACTAAGCAACCACCGTATGTGCCAGAAATGACTAAAGT
ACATGATGAAATACACAAATGAGAGATGTATTGAGGATACTAACCTGCTGTATAAGGTGC
ATGCATTTGGACGACTGGACTCCGTATGCATTGTTAACTATGTGGGGAATATTATGTTTG
GCACACAGAGCAGCCAGTTCCTCAAGCCTAGAAGACAAGATAATGAATGACTTGTATTTA
TAAATCGACTACTGTGACGTCTACAACGTAATAAAAGGGTCAGTTAAAGCGAGCATTACC
TGTCGGGGACACGCGGGGCAAAGCAGGATGTTGTCGAATGAATACACAAGACGTTATCGG
CTCCGAGTTCTTCGATCGTGCGTTCAACCGCTTCCACGTCCGTCCGCAACTCATCGCCCT
CAAGAACGTTCTCCACCACCACCGGTTCAAAGCCTGTTGAAACAGTCAGAAATAAGCCAG
AGACCCCCACCTAAGGTGTTACTGCGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTAAGAG
CAAGAAGCCCAATTTTGCCTGGCATACGGGGGGGATAATTAGCACATATCACTTTACGTG
GCATTCAGAAATAACTCTGCACAATGGCCATCCGCTGCCATGTTTCCAACACTAATGCAG
TCTGAAGCGGGTGGAGGAGTGAAGGGACATCGGATATTGACGTCAGCGTCACCTGCTGTG
ATCATGGCTTTGAAGCAGGACTTCTGGTCGATGCGAGGCCAAATGATGTAACGGGCTTTG
GGCCTTCGATGGCGCAGAGTCAGGAAGCACAGAGTCAAGCTCATTCCTGTTGCCATGGGA
ACTACAAAGCAGCTCGCCGCACTCCGGACACCTGCGGGCGGAAGAAACAAAGCATGTTTT
TATAGTTTTCTATTTACCCTCTATTCTTTTTAATGGAAGCGCCTGATTAAAAAACACATT
TAAATGGTTTGGTGGCTGAAAAACAAAAACAAATATGAAATTTCCTTCAGTTAGAATGTC
AAAATGTACACACCGGTGAGCTTTAAGATGTCCAACACCACGGAATTGGTCAGCTTGTTT
AGCAGACTGGATCCTGCAGCTTTGGGCTGAATAGCAGCGATGTCACCTGACCGACCTATG
CCATGGATCAACCTGCATAAAACAGCCAGCTGTAACAACCGAAGACTCGAAACAACGTTC
TTAAATTGAGGCATCCAAATACGGCACTTCACTGGTCACCAGTTGGCTTGTTTACTTTTT
TAGGTAAATCAGTACCAGTGTTTACATTGGCTGGTAAGCTAGTGAGATGCCTTGATTTGG
CCTCGATTTAAGATTTCTTATTTTCATTCATTATTCACAATTCCTCATTGGCCGCATCCA
TGGGTTCCTTCGATAAAATGTAAACTCCTACACAAAGAGTCAGACGTTGAGGGACTGATT
GTCAAACTTGAACCTGTAATGTCGTCTCGCCACGAGGCTGGACGCCACCCGGCCCTCCCG
CTCTCCCACGCCGCAGTTGCCAAGGAAGTTATTGCTGTCCATCACGGCCAGCTCATTCAG
GAAGAGCTCGATGGTGCTCTCAGTCCAGCCGTCCTCTGGACACTTCCCCTGCAAACACAC
GCAACACGCAAATTGGATGAATCCGCAGTGACTCGAGGAAACACGAGCGCAGCTGTAGAC
CGCACCTGCTCCAGTAGATGTCTGATGAGCTGCTCATGGCCGCGGCGCGCCTGGCTGCCC
TGTCGAATGTACGAGGTGGACACGATCTTCTCACCCAGGCTGAAGTTTTCGCTGTTCAT
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