SelenoDB
Release 2.0
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Transcript Report for SPT00001090_2.0
Identity
TranscriptSelenoprotein M (SelM)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001090
Transcript release2.0
External IDNone
Gene SPG00000994_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001090_2.0 # Transcript # Selenoprotein M (SelM) # Stickleback (Gasterosteus aculeatus) # Full length # Reverse
AACCCACCAGAACGTGTAGCATCAGCCTCAGGCCAGTCAGACAGTTTTCAGCCTGAGGCT
TCATTCAGTTTCCCAGTAGGTAGAAAGCAATCGGACACACAAGGGGAAGACAAGAAGGCA
AATATTTGAAGAACATTGACACGCAATGTACCAAAAAACTAAATAAAACACTTCCAGTTG
GTGTACAGAGTAAAAAAAGCACTCGAAGCAAACTGTTGGGCTATTATTGCTACTAAATTA
AGATCAAACAGAACAATGTGTGCAAATTAAGACTGGATCTTTTGGAGGCCTTTTGCCAAA
GCGGAGAAAGTGACCACGCTCAAATGCGAGTCTTATTTTGAAATGGCAAGTATTTCTTTC
ATTAAGTACATTAACCAGCTGGACGTGGATCGGCTTAGCGGTACTGTGGGAATTTCACTC
CCCACCACTACGACAGGTTACAGGTCAGTGTGCGTGGCGTCTGCTCCGGGCTTTGAGGAG
GCGTTGTCTGTGGCGAGAGAGGCTACGGAGGACTTGTAGGGCCGCTCGTCTTTAAACGGG
CTGTCTTTGGCTGGAGAGAAGCGGAACTCCTCCGGCACCTCGTCCTCTGGCTTGGCCTTC
TTGTAGAAGCCCAATTCGCCCAGCAGCCCGTTGATCTCGGAGCGACTCATGCCAGCCAGG
GGGAGCCGCTGTGGAAGGAAGTCACGTCTTAAATTCAAGTTTCAGGTTAAATGCGCTTTT
CGGTCACTGTGGTCGGCGACCTGAAGTGTCCCGGCACACAGGACTGAACGCTAGATGTTA
GTCTGAATGTGTCTGCTGTTGAGGGTTTAGGTTGGTGTAAATTCTGCCCCCAAGTGGCCA
GAAATAAAAGCTCAATGCAGCGATACATTTTAGCTTAATGTCTTAATTCCACTTCTGGAT
AGAGAGAAATGAAGCAGAATTTACAGATTGACAATAATTGGTGTAGAAGATCTAAACCCC
CAAAGAGAATGAAAAAAATCACATACCTGACATCACAATTGTCCGTATGCTGTGATCCCA
TTTAAAGTGTACATATAGAGGCTTTTAAATATTTCCCGTTGCCACACAATGCAAATATAA
AATATGCTGCAAAAGAAAAACTTACATCCAGCTCTTCATAATAGTGGTTCAGGAGGACAA
GCTCGGGGTCGGCCCCAGGAACGTGTTTCATCACCAGGTTGTGGCTGAGGGAGGGATGGT
TAAAGATTGCCGCAGAGACTTCAGAGTGCACTTTTTGCTGTGTGCAATTCATAAACCGAC
ATACAGGAACAAGTAACAGCAGAGTACTTTAGGCAAAGGATACTAAAGAGGAATGTCCTG
GACCACAAAGGCTTTGACCTGGAGACGGAAGTGGATTAGTGCTTTTCACTCAGAGATAGT
TTTGGTTACGGATCTGGATTAGTTGAAACTCTAGATGCAAAATGTCTACACCATAAAACA
GCGGCTGAGGCTTCAGTCGGCATCTGCTCTTTAACAGTGTGCACTTGTTGACCACATGCC
AGGTAACTCACCTCTATGAGCCTGTTCAGCTGTCATCCACCACACGTCTGGAAAGAAACA
CAACATCAGGTACACAAAATGTTTACATGCAGCTCTCATACTACAGAGAAACTTGGATAT
GACCTGATTTAAGTGTTCACAATGCATCCAGATTTAAAATAGGTGATGCCTGCCTCACCC
ATTTGAAAAGAAAAGAAAAATCTGGGCCGCAGGTGTTGAGTTTCAGCAGGTGTGTCTAAC
CCAACAACGGCAACAATAGCAGCAGATTGCGCGCGGTTCTCGGGTGACGCGGGCCGGGTG
GTGATGTGGTGACACCCCGGGGGACCGCGCATGCTTTCCCGCAGTGAGAGGTGTTGAGTT
TTACAAACTTTTGTGCAGGAATCAGACTTCCGCATCCACACCCTCACGGTTCATTCCCAG
GTCATTTACAGCAACACCCTAAATCCCTGTTATCAATTCGATCGTTATGACAAAATAATC
TATATTTTGTTGTCTGAAGAGCATAAGTAACCGGGCTGCAGCCTGCAGAGCTCATCCGCA
CGCATGCGCAAATCACGGAAAAGTGAGGCAACGCATTTAGCAACACATTAATAACACAAC
CCGAGCTAACTGAAATGAATATGTCACAGCCTCACTGTAAATACAAACAGCCTCGCATGC
AGCCCGGCGTCATGGAAGGTGTGTGTGGGGGGGTCACCGTACCTCCACTCTCGCTTTGGC
CAGCCCGTCCAGGTTCTTCAGCTCCGCAGCGTGAGCCGAGCTGCGCTGAAGCAGCGCGGC
CACCACGATCAGCCACATGGCTCCGGCACCGGTTCCTGCGGGTGTCTGGAGGAGAGCACA
CGCGACTCAGAAGAGGAGCAGGGATGATGTGTGCAGCTCGTCCGTTACGTCCCGACCTCC
TGCCACGTCGAGAGCCAGAGGAGGAGGGGAGGAGGGGG
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