SelenoDB
Release 2.0
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Transcript Report for SPT00001091_2.0
Identity
TranscriptSelenoprotein N (SelN)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001091
Transcript release2.0
External IDNone
Gene SPG00000995_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001091_2.0 # Transcript # Selenoprotein N (SelN) # Stickleback (Gasterosteus aculeatus) # Full length # Forward
ATGGCCGCGGACGTGGATAAAACGCCCCCCGGGAATGAGAGCAATTCGTCACGGCGGGGT
GGGCGCCGGAGCCCGGGCCGCGGATCCTGGGTCTCCCGCGGGGTCTGGACGCTGCTCGTG
GTCGCCGCTGTCCCGCTCCTCGCCTACGGGATCAAACATTACCAGGATGCCCAGCTCCTC
CAACGTCATGTGAGATCTACAAAAACCTCTTCTGATTAACCGGGGACCTAAACTAAAAAA
CAATAAAAACAAAAAAGTAAAATTCCTGTCTGTGTTAATAGAAAGTTTCTATTACATTTT
ATGACCTAAATTTAGTGATGCACGTAATGCAGATCTAATCGTTATAATTCGATGCTGTTC
AGTCAGACACTCAGTCGCCACGAAACACATCCTGTGCAGTTTTTCCACTCGTGGTGTTTT
ATTAGGTGAGGTGGATGCGAGTCGCAGCTGGTGAAACACTCTTGTTTGGCTAAGCAGGGG
TCTCCTGCTTGCTCGTGTCCTTCCCTCCCCCTCTTCCTCTCCTTCTCCCTCCATTGTAAA
GGCGCCAGGAGGCACGCATCGGTCTGAGAAGCACATGTCTCTGCCTCTGGGGCTGATCTG
TTTCCAGACAGGACACTGCTGAGGCTGAATGAGGCACAAAACACTATAGTCACGTGCTTT
TATATGGGCGTAGATAGGCTGCATCTACAGCAGTGTTTTCTTTTCCTGTATATCGGTGCT
TGATGTGATGAGATTGCTCACTAACGCATGTGCACCCCTCCAAATAGGAGGAGAGTGTTC
GAACCCTGGGTGCAGAGGGGCTCTTTCTTTTCTCCTCCTTGGACACCAACCACGACCTTT
ATCTCAGCGCAGAGGAGTTTAAACCTATTGTTGAGAAGCTCACAGGTACATCACTTCAAC
TTTTCTTGCTCGGTGTCTCATTTATTATCAATGCCGTTTCCTCGTCCACCTGCAAAAACC
TCAGTATGAAGCTGCGTCTGTGCTCCCTGTGCCTTCCTCACAGGAATTACACCCCCGGTA
GATTTTGAAGAGGAAGAGATCTATGACCCCGATGGAGAAACTTTGACCGTGGAGGCCAAA
ATGCAGCCTCTGCAGCTGGACTCCATGACGAAAAGCAAAGATGGATTCCTTGGGGTAGGA
CGAGGCCAAACTGCTCTCCATCTCTCTCGACAACTTGATAGTAACGAGTCTGCATCAAGG
GTTTAGATAACGGCACACAATGAATTCTTAATTACCTTTTTTTCCGACGTGTCGTTTTTG
TCAACATCAGCTCTTTGTCGATGGAGTTCATTCAGATTCTGTAAGCAGTCGAGAACTACA
TCAATAATAAAATAACCGATTGATAACTTTTAATGACCTTTAGAATTGTAACAGGTTTTT
TTTTTTTTTGAAGACCGTGAATTGATTTAGTCTCCGGTCTCCTTGCTGTCCGGTCTTGCA
GGTGTCTCACAGCTCTCTGAGCGGGCTGCGCTCATGGAAGAGTCCGGCGGTGCCCTTTTC
CTCCTTCTCTGCCGGCCAGTTTAGGGCCCTGCTGCCCCCGAAGAACAAGGTGGAAGTGGG
CGACACGTGGTGGGTCATTCCGAGCGAGCTCAACATCTTCACCGGGTACCTGCCCAACAA
TCGTTACCACCCTCCCTCACCAAAGGGCAAAGAGGTATCCCAAAGAAACTCCTCAGGGTT
TCAGAGACTTTCTAGGTTCTCCGACTGTTTGTTGATGGCTGTTCTCCTCCTGCTGCAGGT
TCTCATCCACTCCTTGTTGAGTATGTTCCACCCGCGGCCCTTCATCAAATCACGTTTTGC
TCCTCAGGGCGCCGTCGCCTGCATTCGAGCCAGCAGCGACTTTTATTATGACATTGTGTT
CAGGTGAGAACCAATTTGCGAGGAGACAGAAAAGGTCACCCGGGTGCTTTCCCTTCTTTG
GGCCCGTTCAACTCCACATTACGTTTGCTTCACTTCAGTGCCGCCTAATTTCCACAGTTT
ATTGTTCATTTTAATATCCACGCTGTCATGCGGCCACAGGTTTCCTCTTAAAATCTGCGT
GCTCCGCTTGACTCCACTTTACTTCGTTCTCAATGTTTCATTATTATTAAGTGCTTAAGC
AGTTTTGTCTAGTTTGTTCCGGTTTTGAAAGCTCTTGTAAGGTAAAAACACACACGAGTC
AGCTGCCATAGAGCGACTTATTTAAATACAGAAAACCTCCCGATGTGTTCTACATGCTGA
TTGATTTTATTTTGTTGTATTAAGTTTTTATCTGTAGCTCCAAATGCCAACATCAGAATT
TTGAAGAACTGCATTTCCATGTGACAATAATGTAACTCTAGCTAATAGAAAGCGGTTTAC
AAAGCCTACAAATGGAATCGATCTACAATTTCTATAGAAATTAGTCAGCAGTAACGTGAG
GTATTACAGACGCTTACATCTCTTGTTTGGTCCCAGAGGTCGTACCAAAGTTTCCTTTGT
GTTACATTCTGACCCCTCTCGCGATACAAACCCATCTCCTCGTCCTGTTCACCTCCACAG
GATTCACGCAGAATTTCAGCTCAACGATGTCCCGGACTTCCCCTTCTGGTTCACTCCCGG
GAAGTTCACGGGCAACGTCGTTCTTTCTAAAGATGCATCTCACGTCCGTAGCTTTCACCT
CTACGTCCCCAACGACAGGTAAATCCCTCGGGACACATAACCGTCTCCTCTGTCTGCGCT
TTTTTTTTCTTTCCCGGTGCGATGAATCCCGTTTTGTGTGTCAGGTCTCTGAATGTGGAC
ATGGAGTGGCTGTACGGGGCCAGTGAGAGCAGCAACATGGAGGTGGACATCGGATATCTG
CCACAGGTACGGCTGCAGGGATCCGCGGATCACAGGCCGCAACATAGGAGATGTGAAATA
ATGAAAACAATATAAAAAGTTTTATATTTCAGACGGCTTGTGTTAAAATTTCTGAATACG
TGCACAGTTGGAGCTGCAGTCCACGGGCCCGTCCACTCCCTCCGTCATCGTGGATGAGAA
GGGCGACGTCATCGACAGGCGGGAGGGCGGAGGTGAGCCCATCCAGTTCGTCTTTGAGGA
CATCCGCTGGAGCTCAGAGACGAGTCGGCAAGAAGCCGACCGGCGCCTGGAGGTCGCCCT
CTACCCCTTCAAGAAGGTAACGGCGCGTTCGAGCGACGCATCGTAGGCTCAAGCTCTGTG
GGTTCCACAACCGTTATGTCGGCCTCCTCTTTCTCCCTCCCCAGGTGTCCTACCTGCCCT
TCTCCGAAGCCTTTGAGCGCGCTGAGGCAGAGAATAAACTGGTGCATTCCATTCTGCTTT
GGGGGGCGTTGGACGACCAGTCCTGCTGAGGTGAAATCATGAACACGTGTCGTCATTGTT
AAAAGGAAAAAATGACATGTGGAGTCACTGTTGTCTTCAGCCAGTGGAAACATCTTCCCT
GTTACTTTGAAGCCTCTCAAATCGTTTATATCAACTTACTATGAGTGAATGAGAAATTCT
GCCATGTTGCGTTTGCGTGTTCGGTAAAGACTTCTAATGGAGCACAGATACTTTTATAGA
ATGTAATGAATTAATAGGTCTACCTTTTACAAATTAAAGGTTGAATTCACTACTACTAAA
TCTTTTTAATTCAACATGCGGACATCAGTGTGAGTTAATGTTCAGCAAAGCTCACTGGCT
CACTTTGCTGCCTTTTCAACATCTCTGTCCACTCGTGCGTCCTGTAGGTTCGGGGCGAAC
TCTCCGGGAAACAGTTCTGGAAAGTTCGCCCGTCCTGGCTCTGCTCAACCAGAGCTTCAT
AAGCAGCTGGTCTCTGGTCAGAGAGCTGGAGAACATGCAGGTGAGCAGCGCAACACCCAG
AGAAACTCCACACCCCCCCCCCCCAAAAAGTATTCTCCATTTATGTTTTCACATTTGTCC
TTTTTTCTTTTAACCAGGCTGATGAGCAGAACCTTGTGTTGAGTGAAAAGGCCCGATTAC
ACCTGGAGAACTACAACTTCCCAGTCGAGATGATGGTGGCGCTGCCCAATGGAACTATTG
TAAATATGTAGAACAACTCCTGCTGATTTGAGTGTAAAGTGATTTCATTTAAACAAGTAG
AATAGGGAAAGCAGTTGTACTTATTAATGTTGCTAATCTTTCCTCTTTATAAGTGTGCCT
TTGTGTTGGCAGCCGCACGCTCAGGTCAACACGGGCGCGTTAGAACGTCAGACTTTTCAT
CTGCTTCCCGTTGGGCTTTAGATCCACCACATCAATGCCAACTTCTTCCTGGACCAGACG
GCCATGAAACCAGAGGAGGAAGGCGCTCCGTTCAGCTTCTCTGGAGGGTTTGAGGACCCG
TCTACATCCACGTATATCAACTTCCTCAAGGAGGGGTTGGAGAGAGCCAAGGAGTACCTG
GCACAGTAGCTGGTGTGAGTGCGCGATAAGAGGCGGAGAGACCAAGCGGAAGGAAATGAT
TATCATTCCTCTGACCTAATGATCCAAGATAAGGAAAAGCCGCCAACGGTTACATAGAGA
AGCTTTCTCATCAGTGTCGGCAGCTGACATGTTTTCCATTTTCTGTCCAGTTTATTTTTG
TCCGGTGACAAACTTAACGGGGAAATATTGCTTCTCAAACCCAATGATACTGTTAATGTA
GCATATTTACTTCGATACAGCAGTAATGGGTATGTTAACCCATTTAGACCGGGTCCCTGA
GCGTGTAGCTTAATGCACAAAAGTCCTACATCTCTTATTTTACACCCAGTTTTTAATGAC
TTGAGTTTGCCCACAGACGGGGAGGGAAGAGGGGCAGCCGCCGCGTTGCCTTCAGTTGTG
TTTCAGCAGCTTGTGAAGACGTTGCCTGAAATCTCTTTGGGCCGGGCGACGCCTGATGTT
ATTGCTGAGAC
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