SelenoDB
Release 2.0
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Transcript Report for SPT00001091_2.0
Identity
TranscriptSelenoprotein N (SelN)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001091
Transcript release2.0
External IDNone
Gene SPG00000995_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001091_2.0 # Transcript # Selenoprotein N (SelN) # Stickleback (Gasterosteus aculeatus) # Full length # Reverse
GTCTCAGCAATAACATCAGGCGTCGCCCGGCCCAAAGAGATTTCAGGCAACGTCTTCACA
AGCTGCTGAAACACAACTGAAGGCAACGCGGCGGCTGCCCCTCTTCCCTCCCCGTCTGTG
GGCAAACTCAAGTCATTAAAAACTGGGTGTAAAATAAGAGATGTAGGACTTTTGTGCATT
AAGCTACACGCTCAGGGACCCGGTCTAAATGGGTTAACATACCCATTACTGCTGTATCGA
AGTAAATATGCTACATTAACAGTATCATTGGGTTTGAGAAGCAATATTTCCCCGTTAAGT
TTGTCACCGGACAAAAATAAACTGGACAGAAAATGGAAAACATGTCAGCTGCCGACACTG
ATGAGAAAGCTTCTCTATGTAACCGTTGGCGGCTTTTCCTTATCTTGGATCATTAGGTCA
GAGGAATGATAATCATTTCCTTCCGCTTGGTCTCTCCGCCTCTTATCGCGCACTCACACC
AGCTACTGTGCCAGGTACTCCTTGGCTCTCTCCAACCCCTCCTTGAGGAAGTTGATATAC
GTGGATGTAGACGGGTCCTCAAACCCTCCAGAGAAGCTGAACGGAGCGCCTTCCTCCTCT
GGTTTCATGGCCGTCTGGTCCAGGAAGAAGTTGGCATTGATGTGGTGGATCTAAAGCCCA
ACGGGAAGCAGATGAAAAGTCTGACGTTCTAACGCGCCCGTGTTGACCTGAGCGTGCGGC
TGCCAACACAAAGGCACACTTATAAAGAGGAAAGATTAGCAACATTAATAAGTACAACTG
CTTTCCCTATTCTACTTGTTTAAATGAAATCACTTTACACTCAAATCAGCAGGAGTTGTT
CTACATATTTACAATAGTTCCATTGGGCAGCGCCACCATCATCTCGACTGGGAAGTTGTA
GTTCTCCAGGTGTAATCGGGCCTTTTCACTCAACACAAGGTTCTGCTCATCAGCCTGGTT
AAAAGAAAAAAGGACAAATGTGAAAACATAAATGGAGAATACTTTTTGGGGGGGGGGGGT
GTGGAGTTTCTCTGGGTGTTGCGCTGCTCACCTGCATGTTCTCCAGCTCTCTGACCAGAG
ACCAGCTGCTTATGAAGCTCTGGTTGAGCAGAGCCAGGACGGGCGAACTTTCCAGAACTG
TTTCCCGGAGAGTTCGCCCCGAACCTACAGGACGCACGAGTGGACAGAGATGTTGAAAAG
GCAGCAAAGTGAGCCAGTGAGCTTTGCTGAACATTAACTCACACTGATGTCCGCATGTTG
AATTAAAAAGATTTAGTAGTAGTGAATTCAACCTTTAATTTGTAAAAGGTAGACCTATTA
ATTCATTACATTCTATAAAAGTATCTGTGCTCCATTAGAAGTCTTTACCGAACACGCAAA
CGCAACATGGCAGAATTTCTCATTCACTCATAGTAAGTTGATATAAACGATTTGAGAGGC
TTCAAAGTAACAGGGAAGATGTTTCCACTGGCTGAAGACAACAGTGACTCCACATGTCAT
TTTTTCCTTTTAACAATGACGACACGTGTTCATGATTTCACCTCAGCAGGACTGGTCGTC
CAACGCCCCCCAAAGCAGAATGGAATGCACCAGTTTATTCTCTGCCTCAGCGCGCTCAAA
GGCTTCGGAGAAGGGCAGGTAGGACACCTGGGGAGGGAGAAAGAGGAGGCCGACATAACG
GTTGTGGAACCCACAGAGCTTGAGCCTACGATGCGTCGCTCGAACGCGCCGTTACCTTCT
TGAAGGGGTAGAGGGCGACCTCCAGGCGCCGGTCGGCTTCTTGCCGACTCGTCTCTGAGC
TCCAGCGGATGTCCTCAAAGACGAACTGGATGGGCTCACCTCCGCCCTCCCGCCTGTCGA
TGACGTCGCCCTTCTCATCCACGATGACGGAGGGAGTGGACGGGCCCGTGGACTGCAGCT
CCAACTGTGCACGTATTCAGAAATTTTAACACAAGCCGTCTGAAATATAAAACTTTTTAT
ATTGTTTTCATTATTTCACATCTCCTATGTTGCGGCCTGTGATCCGCGGATCCCTGCAGC
CGTACCTGTGGCAGATATCCGATGTCCACCTCCATGTTGCTGCTCTCACTGGCCCCGTAC
AGCCACTCCATGTCCACATTCAGAGACCTGACACACAAAACGGGATTCATCGCACCGGGA
AAGAAAAAAAAAGCGCAGACAGAGGAGACGGTTATGTGTCCCGAGGGATTTACCTGTCGT
TGGGGACGTAGAGGTGAAAGCTACGGACGTGAGATGCATCTTTAGAAAGAACGACGTTGC
CCGTGAACTTCCCGGGAGTGAACCAGAAGGGGAAGTCCGGGACATCGTTGAGCTGAAATT
CTGCGTGAATCCTGTGGAGGTGAACAGGACGAGGAGATGGGTTTGTATCGCGAGAGGGGT
CAGAATGTAACACAAAGGAAACTTTGGTACGACCTCTGGGACCAAACAAGAGATGTAAGC
GTCTGTAATACCTCACGTTACTGCTGACTAATTTCTATAGAAATTGTAGATCGATTCCAT
TTGTAGGCTTTGTAAACCGCTTTCTATTAGCTAGAGTTACATTATTGTCACATGGAAATG
CAGTTCTTCAAAATTCTGATGTTGGCATTTGGAGCTACAGATAAAAACTTAATACAACAA
AATAAAATCAATCAGCATGTAGAACACATCGGGAGGTTTTCTGTATTTAAATAAGTCGCT
CTATGGCAGCTGACTCGTGTGTGTTTTTACCTTACAAGAGCTTTCAAAACCGGAACAAAC
TAGACAAAACTGCTTAAGCACTTAATAATAATGAAACATTGAGAACGAAGTAAAGTGGAG
TCAAGCGGAGCACGCAGATTTTAAGAGGAAACCTGTGGCCGCATGACAGCGTGGATATTA
AAATGAACAATAAACTGTGGAAATTAGGCGGCACTGAAGTGAAGCAAACGTAATGTGGAG
TTGAACGGGCCCAAAGAAGGGAAAGCACCCGGGTGACCTTTTCTGTCTCCTCGCAAATTG
GTTCTCACCTGAACACAATGTCATAATAAAAGTCGCTGCTGGCTCGAATGCAGGCGACGG
CGCCCTGAGGAGCAAAACGTGATTTGATGAAGGGCCGCGGGTGGAACATACTCAACAAGG
AGTGGATGAGAACCTGCAGCAGGAGGAGAACAGCCATCAACAAACAGTCGGAGAACCTAG
AAAGTCTCTGAAACCCTGAGGAGTTTCTTTGGGATACCTCTTTGCCCTTTGGTGAGGGAG
GGTGGTAACGATTGTTGGGCAGGTACCCGGTGAAGATGTTGAGCTCGCTCGGAATGACCC
ACCACGTGTCGCCCACTTCCACCTTGTTCTTCGGGGGCAGCAGGGCCCTAAACTGGCCGG
CAGAGAAGGAGGAAAAGGGCACCGCCGGACTCTTCCATGAGCGCAGCCCGCTCAGAGAGC
TGTGAGACACCTGCAAGACCGGACAGCAAGGAGACCGGAGACTAAATCAATTCACGGTCT
TCAAAAAAAAAAAAAACCTGTTACAATTCTAAAGGTCATTAAAAGTTATCAATCGGTTAT
TTTATTATTGATGTAGTTCTCGACTGCTTACAGAATCTGAATGAACTCCATCGACAAAGA
GCTGATGTTGACAAAAACGACACGTCGGAAAAAAAGGTAATTAAGAATTCATTGTGTGCC
GTTATCTAAACCCTTGATGCAGACTCGTTACTATCAAGTTGTCGAGAGAGATGGAGAGCA
GTTTGGCCTCGTCCTACCCCAAGGAATCCATCTTTGCTTTTCGTCATGGAGTCCAGCTGC
AGAGGCTGCATTTTGGCCTCCACGGTCAAAGTTTCTCCATCGGGGTCATAGATCTCTTCC
TCTTCAAAATCTACCGGGGGTGTAATTCCTGTGAGGAAGGCACAGGGAGCACAGACGCAG
CTTCATACTGAGGTTTTTGCAGGTGGACGAGGAAACGGCATTGATAATAAATGAGACACC
GAGCAAGAAAAGTTGAAGTGATGTACCTGTGAGCTTCTCAACAATAGGTTTAAACTCCTC
TGCGCTGAGATAAAGGTCGTGGTTGGTGTCCAAGGAGGAGAAAAGAAAGAGCCCCTCTGC
ACCCAGGGTTCGAACACTCTCCTCCTATTTGGAGGGGTGCACATGCGTTAGTGAGCAATC
TCATCACATCAAGCACCGATATACAGGAAAAGAAAACACTGCTGTAGATGCAGCCTATCT
ACGCCCATATAAAAGCACGTGACTATAGTGTTTTGTGCCTCATTCAGCCTCAGCAGTGTC
CTGTCTGGAAACAGATCAGCCCCAGAGGCAGAGACATGTGCTTCTCAGACCGATGCGTGC
CTCCTGGCGCCTTTACAATGGAGGGAGAAGGAGAGGAAGAGGGGGAGGGAAGGACACGAG
CAAGCAGGAGACCCCTGCTTAGCCAAACAAGAGTGTTTCACCAGCTGCGACTCGCATCCA
CCTCACCTAATAAAACACCACGAGTGGAAAAACTGCACAGGATGTGTTTCGTGGCGACTG
AGTGTCTGACTGAACAGCATCGAATTATAACGATTAGATCTGCATTACGTGCATCACTAA
ATTTAGGTCATAAAATGTAATAGAAACTTTCTATTAACACAGACAGGAATTTTACTTTTT
TGTTTTTATTGTTTTTTAGTTTAGGTCCCCGGTTAATCAGAAGAGGTTTTTGTAGATCTC
ACATGACGTTGGAGGAGCTGGGCATCCTGGTAATGTTTGATCCCGTAGGCGAGGAGCGGG
ACAGCGGCGACCACGAGCAGCGTCCAGACCCCGCGGGAGACCCAGGATCCGCGGCCCGGG
CTCCGGCGCCCACCCCGCCGTGACGAATTGCTCTCATTCCCGGGGGGCGTTTTATCCACG
TCCGCGGCCAT
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