SelenoDB
Release 2.0
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Transcript Report for SPT00001093_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001093
Transcript release2.0
External IDNone
Gene SPG00000997_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001093_2.0 # Transcript # Selenoprotein O (SelO) # Stickleback (Gasterosteus aculeatus) # Full length # Forward
CGACTCCTCGCTACGGCCGGCATGGCCGACATGGGTCTGGTGACTAGCCGCTCCCCGCTC
GAGCGGCTCGACTTCGACAACGTCGCCCTCCGGAGACTCCCGCTGGACCCGTCCGAGGAG
CCCGGCGCGCGTGCGGTGAAAGGGGCGTGTTTCTCCCGCGTGAGGCCGCAGCCGCTGGCG
GCGCCCCGGTTCGTGGCCGTGTCCCGCGACGCCCTCGCGCTGCTGGGGCTCAACGGGGAG
GAGGTCGCGCGCGACCCGCTCGCGCCGGAGTACCTCAGCGGGTCCAGGATCATGCCCGGC
TCCGAGCCCGCCGCGCACTGCTACTGCGGCCATCAGTTCGGGCAGTTCGCCGGGCAGCTG
GGCGACGGCGCCGCCTGCTACCTGGGGGAGGTGAAGGTGCCCCCCGGTCAGGATCCGGAA
CTGCTGCGGGAAAACCCGAGCGGTCGGTGGGAGATGCAGGTGAAAGGAGCTGGACTGACT
CCCTATTCAAGGTACAAGGGTTATTACAGCTTTAAACCTACAGGTCATTTAAATGAGCAG
ATGTGTTTAAAGGGATTGTTACACATTAACGCAAATTGATGAGTGCAACTGAATTAAATC
TCTGCCTTTTTTTGTGGGGATCTACTTTTTCACGCCACAGACAAGCTGATGGCCGCAAGG
TCCTGCGCTCCAGCATCAGGGAGTTCCTGTGCAGCGAGGTCATGCACTTCCTGGGCGTTC
CCACCACCCGAGCGGCCTGCGTGGTGACCTCCGACACCAGGGTCGTACGAGACGTCTACT
ACAGCGGGAATCCCCGCAATGAGCGGTGCTCTGCGGTCGTCCGCATCGCTCCCACCTTCC
TCAGGTGAGCGGCGATCTTCAGCCCCTCGTGAGAACCTCTTAAGATACGCACGCACACAG
GGGTTGTTTGTCTCAGCTGCGTGCTCTCTGTGCAGGTTTGGATCCTTTGAGATCTTCAAG
CAGGCCGACGAGCACACCGGCCGCCAGGGGCCGAGCTACGGACGGGATGAGATCCGCGGT
CAGATGATGGATTATGTCATTGAGATGTTTTACCCTGACATCCAGCGGGACCACCCGGAT
AGGGTGGAGAGGAACGTGGCTTTCTTCAGAGAGGTCAGGGCACGCGGGTCGCACGTTTCA
GCCAGTGAATCGGCTCTCGGGTCATGAATGGAAGGCTTGCATGTGGCCCAATTAATCCTC
CTAAGCTGACTGCGTGTGCCGAGTCGACGTGACGCGGGCTCAATATGAGATTACGCCGTT
TACCGAAGCACTAAACTCCGGGTGGAGGCTTTTGGCAATGTTTTCAGATTTTAAAGTTTT
GTCGGTGTTTGTAGGTGACGCGCCGCACGGCTCGAGTCGTGGCCCAGTGGCAGTGTGTGG
GTTTCTGCCATGGAGTCCTGAACACGGACAACATGAGCATCCTGGGACTCACGCTGGACT
ACGGGCCATATGGCTTCATGGACAGGTCAGACGTTTGCATTTGATTTACTTGATGTTCTT
CTTGAATGGGGATCTGATCCGATTCATCATCGTCATACAGGAGGAGGTTAAAATGATTGC
GAAGAGGTAATCGGGGGACACACGCGGTGCGCCGTTTACCAGATTTCTCCTAAACACCTC
TCAGGTTTGATCCGGATTTCATTTGCAACGCCTCCGACAACTCGGGCCGATACTCCTACC
AGGCCCAGCCGGCCATCTGCAGGTGGAACCTGGTGAAGCTGGCGGAGGCTCTAGCCCCAG
AGCTGCCGCCGGACCGGGCGGAAGCCGTCCTGAGCGAGTACCTGGGGCTGTATAACAGCT
TCTACCTGGAGAACATGAGGAGGAAGCTGGGCTTGCTGAAGAGGGACGAGCCCGAGGACG
AGATGCTGATCACGGAGCTGCTGCAGACCATGCACAACACAGGTGGGACGAGCGGCTCGA
TGGGCCGATTTGTAAATCGTCTCTGGTGCCACCGTCGCGTCACCGCGGTAACCTTTCCCG
GGTTCCCTCCTGCAGGCGCCGATTTCACCAACACCTTTCGTGGCTTGAGTCGGATTTCCT
GTCCCACCGAGGGAGAAAGTGAGGAAGAAGAGGAGCTCGTCAGGAAAGCCACGGCCCTCC
TGCTGGAGCAGTGTGCCTCCTTGGAGGAGCTCAAGGCCGCAAACAAGCCCGCGATGGATC
CACGGTGAGCGGGCCGCGCGTACTCTCTGTTCTATAGACAAACTGTGTTTTGTCTGTTTC
AGACCGTCACGGAAAGGAAAGTAATGGCCGCCGGTTTAGTTTTATTTAGGGTTCGAGGAA
TGAAATGGCAAAGCCGCTTCGAGTTGATTAGCCAGACAGTCTCTTTAAGGTTTTTCCCGT
TCGAAGTTGCCGTGGTGTCCAGCAACTTTACCTCTATCCAGTGACCCCTGCCAGGGCAAC
GTTGTTCTTTGACCCACACTGTGTTTGCTACTGGACACAAAGTAGTGTGCCTCGTGAAAC
GAGGGACTAAATCCAAATAAAGTTGACTAGATATTCATGTGTGTCAGAAAACTTAATTGT
ACTATTTTGTATACTTTGCAAAACCTTTTGTGTAACAATACAAAAATAGCTAAATGATTG
GGAATACATGTTTGTATTTAGTTTGATGTGATGCAGATTTCAGCCACCAGGTGTCGCCAT
TCAGCCTTTATATCATTGGTCTTGCGTATACTTGTTTTGGTCATCTTGTTACCTCAGATT
GTCCGTATTGTATCAAGTACCCGCACTGGTCCTCTTCTTTCTCCAACACGCCAATAAATC
ATCGAACCGTTGTCTTTTCTGCCCGCCGATGGCAGCGAGCTGGCGATGTTGCTCTCTATG
GCGCAGAGCAACCCGGCGCTGTTCCAGATGATCTCCGACAGGACGACGATTTCCAGGCAG
TTGGAAAAGCTCAGCAAACTGAAAGACCTGACGGAGGCCGGTCCGGACGAGCTGAAGACC
AAGCAGGCCGAGGACTGGAGCCGATGGATCACACGCTACAGGTGAGCGTCTTTTTGATAA
AAAATTCACGGTGGGATGGAAGGCGAAGATGAGGACGAATAAGGTGGAGGACTGCATGGA
GCGGATAAGAGCTCGTGGGCGGAAGTGTGGCTGATAAAGGGGGCGGAAGGGAAGTAAAGG
AGGGGAAATGTGCCACTGCTCCACTGTGTTGTGTTCTCTCGGCCACAGGAAGCGCCTGTC
TCGGGAGCTGGAAGGCCAGAGCGATGTGCAGGCGGTGCAGGAGGAGAGGGTGAGGGTGAT
GGACAGCACCAACCCTCGCGTGGTGCTGCGGAACTACATTGCCCAGAATGCAATTGAAGC
TGCAGAGAAGGGAGACTTCTCTGAGGTGAGGTTTGGATTATACTTTTGCAGAAGCTCGTC
ACTTTGTCATATTACACAACAGTTTTTTTTGTTGCATTGAGGCCAATTTTAAAGTAAAGA
TTTAAACGCATCCAAGTTCCATTTCATTTAGTTCTCCTTATTCTCAGTGTTGGACTCTCA
GCTTGTTTACCTGCCGTCACTTCTCACTTCCTCTCTGCGCTGCAGGTCCAGCGAGTGCTC
AAGGTTCTGGAGAAGCCCTTCTCTTCGCAGCCCGGTCTGGAGTTTCCCGCGTGGGTGGAC
GGAGGCGCGCCCACCAAGCAGGCCGAGAGGGACGAAGGGGAGGAGGAGGAGGACGACGAC
GACCAGCAGCAGGAGGCAGCTTCTAAATCCACAGCCAGAATTCCTGTTCCTTATGACAGC
CGGCCCCCGGCCTGGGCCCGTGAAATCTGCGTCACATGATCTTCGTAAAAACTTCCCTTG
ATTGTCTTGCTCTTGTGCTCATGGTGATGAGAGTTCATTGGAGTTGATTTGGGCATTTTC
ATGTCCTTTCCGCTTCATGTGCAACTCTCCATGACTTGGGCAGGCAGCGTCAGGGAAGTT
AGCGCGAGGCGTGACGCCCCATAGGGCACCTGGCTGAGCCAAAGCAGACCGGCGGGTTGA
ATTCAGGGCAATACAACTTGAATAGACACTAATATGATGACGTGACGAGATTTTCAGCAT
ATTTGAAATTTCTCAGGAAATTACTTTAAAGTGGTAAATGTCCTAAACACAATCAGTACT
GATCCATTGACATTATTTTTTTTTTTAGGTGGATCTTTCCTTGAATGTAAGACGAATTAG
GATAACTGGCACTTAGATGTCACAAATGACATCCAGAGACATTGCTGGACTTTTTCCTAG
AAAGCCGTCAGCCCGTCCCGTCTGCTTTGTGCTCGACCAGCTATTGATGACGACTCAGAC
AACAAGTCCTACAGCAACCTGTCTGAGTCTGACAACCTGTGAGGCGTC
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