SelenoDB
Release 2.0
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Transcript Report for SPT00001093_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001093
Transcript release2.0
External IDNone
Gene SPG00000997_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001093_2.0 # Transcript # Selenoprotein O (SelO) # Stickleback (Gasterosteus aculeatus) # Full length # Reverse
GACGCCTCACAGGTTGTCAGACTCAGACAGGTTGCTGTAGGACTTGTTGTCTGAGTCGTC
ATCAATAGCTGGTCGAGCACAAAGCAGACGGGACGGGCTGACGGCTTTCTAGGAAAAAGT
CCAGCAATGTCTCTGGATGTCATTTGTGACATCTAAGTGCCAGTTATCCTAATTCGTCTT
ACATTCAAGGAAAGATCCACCTAAAAAAAAAAATAATGTCAATGGATCAGTACTGATTGT
GTTTAGGACATTTACCACTTTAAAGTAATTTCCTGAGAAATTTCAAATATGCTGAAAATC
TCGTCACGTCATCATATTAGTGTCTATTCAAGTTGTATTGCCCTGAATTCAACCCGCCGG
TCTGCTTTGGCTCAGCCAGGTGCCCTATGGGGCGTCACGCCTCGCGCTAACTTCCCTGAC
GCTGCCTGCCCAAGTCATGGAGAGTTGCACATGAAGCGGAAAGGACATGAAAATGCCCAA
ATCAACTCCAATGAACTCTCATCACCATGAGCACAAGAGCAAGACAATCAAGGGAAGTTT
TTACGAAGATCATGTGACGCAGATTTCACGGGCCCAGGCCGGGGGCCGGCTGTCATAAGG
AACAGGAATTCTGGCTGTGGATTTAGAAGCTGCCTCCTGCTGCTGGTCGTCGTCGTCCTC
CTCCTCCTCCCCTTCGTCCCTCTCGGCCTGCTTGGTGGGCGCGCCTCCGTCCACCCACGC
GGGAAACTCCAGACCGGGCTGCGAAGAGAAGGGCTTCTCCAGAACCTTGAGCACTCGCTG
GACCTGCAGCGCAGAGAGGAAGTGAGAAGTGACGGCAGGTAAACAAGCTGAGAGTCCAAC
ACTGAGAATAAGGAGAACTAAATGAAATGGAACTTGGATGCGTTTAAATCTTTACTTTAA
AATTGGCCTCAATGCAACAAAAAAAACTGTTGTGTAATATGACAAAGTGACGAGCTTCTG
CAAAAGTATAATCCAAACCTCACCTCAGAGAAGTCTCCCTTCTCTGCAGCTTCAATTGCA
TTCTGGGCAATGTAGTTCCGCAGCACCACGCGAGGGTTGGTGCTGTCCATCACCCTCACC
CTCTCCTCCTGCACCGCCTGCACATCGCTCTGGCCTTCCAGCTCCCGAGACAGGCGCTTC
CTGTGGCCGAGAGAACACAACACAGTGGAGCAGTGGCACATTTCCCCTCCTTTACTTCCC
TTCCGCCCCCTTTATCAGCCACACTTCCGCCCACGAGCTCTTATCCGCTCCATGCAGTCC
TCCACCTTATTCGTCCTCATCTTCGCCTTCCATCCCACCGTGAATTTTTTATCAAAAAGA
CGCTCACCTGTAGCGTGTGATCCATCGGCTCCAGTCCTCGGCCTGCTTGGTCTTCAGCTC
GTCCGGACCGGCCTCCGTCAGGTCTTTCAGTTTGCTGAGCTTTTCCAACTGCCTGGAAAT
CGTCGTCCTGTCGGAGATCATCTGGAACAGCGCCGGGTTGCTCTGCGCCATAGAGAGCAA
CATCGCCAGCTCGCTGCCATCGGCGGGCAGAAAAGACAACGGTTCGATGATTTATTGGCG
TGTTGGAGAAAGAAGAGGACCAGTGCGGGTACTTGATACAATACGGACAATCTGAGGTAA
CAAGATGACCAAAACAAGTATACGCAAGACCAATGATATAAAGGCTGAATGGCGACACCT
GGTGGCTGAAATCTGCATCACATCAAACTAAATACAAACATGTATTCCCAATCATTTAGC
TATTTTTGTATTGTTACACAAAAGGTTTTGCAAAGTATACAAAATAGTACAATTAAGTTT
TCTGACACACATGAATATCTAGTCAACTTTATTTGGATTTAGTCCCTCGTTTCACGAGGC
ACACTACTTTGTGTCCAGTAGCAAACACAGTGTGGGTCAAAGAACAACGTTGCCCTGGCA
GGGGTCACTGGATAGAGGTAAAGTTGCTGGACACCACGGCAACTTCGAACGGGAAAAACC
TTAAAGAGACTGTCTGGCTAATCAACTCGAAGCGGCTTTGCCATTTCATTCCTCGAACCC
TAAATAAAACTAAACCGGCGGCCATTACTTTCCTTTCCGTGACGGTCTGAAACAGACAAA
ACACAGTTTGTCTATAGAACAGAGAGTACGCGCGGCCCGCTCACCGTGGATCCATCGCGG
GCTTGTTTGCGGCCTTGAGCTCCTCCAAGGAGGCACACTGCTCCAGCAGGAGGGCCGTGG
CTTTCCTGACGAGCTCCTCTTCTTCCTCACTTTCTCCCTCGGTGGGACAGGAAATCCGAC
TCAAGCCACGAAAGGTGTTGGTGAAATCGGCGCCTGCAGGAGGGAACCCGGGAAAGGTTA
CCGCGGTGACGCGACGGTGGCACCAGAGACGATTTACAAATCGGCCCATCGAGCCGCTCG
TCCCACCTGTGTTGTGCATGGTCTGCAGCAGCTCCGTGATCAGCATCTCGTCCTCGGGCT
CGTCCCTCTTCAGCAAGCCCAGCTTCCTCCTCATGTTCTCCAGGTAGAAGCTGTTATACA
GCCCCAGGTACTCGCTCAGGACGGCTTCCGCCCGGTCCGGCGGCAGCTCTGGGGCTAGAG
CCTCCGCCAGCTTCACCAGGTTCCACCTGCAGATGGCCGGCTGGGCCTGGTAGGAGTATC
GGCCCGAGTTGTCGGAGGCGTTGCAAATGAAATCCGGATCAAACCTGAGAGGTGTTTAGG
AGAAATCTGGTAAACGGCGCACCGCGTGTGTCCCCCGATTACCTCTTCGCAATCATTTTA
ACCTCCTCCTGTATGACGATGATGAATCGGATCAGATCCCCATTCAAGAAGAACATCAAG
TAAATCAAATGCAAACGTCTGACCTGTCCATGAAGCCATATGGCCCGTAGTCCAGCGTGA
GTCCCAGGATGCTCATGTTGTCCGTGTTCAGGACTCCATGGCAGAAACCCACACACTGCC
ACTGGGCCACGACTCGAGCCGTGCGGCGCGTCACCTACAAACACCGACAAAACTTTAAAA
TCTGAAAACATTGCCAAAAGCCTCCACCCGGAGTTTAGTGCTTCGGTAAACGGCGTAATC
TCATATTGAGCCCGCGTCACGTCGACTCGGCACACGCAGTCAGCTTAGGAGGATTAATTG
GGCCACATGCAAGCCTTCCATTCATGACCCGAGAGCCGATTCACTGGCTGAAACGTGCGA
CCCGCGTGCCCTGACCTCTCTGAAGAAAGCCACGTTCCTCTCCACCCTATCCGGGTGGTC
CCGCTGGATGTCAGGGTAAAACATCTCAATGACATAATCCATCATCTGACCGCGGATCTC
ATCCCGTCCGTAGCTCGGCCCCTGGCGGCCGGTGTGCTCGTCGGCCTGCTTGAAGATCTC
AAAGGATCCAAACCTGCACAGAGAGCACGCAGCTGAGACAAACAACCCCTGTGTGCGTGC
GTATCTTAAGAGGTTCTCACGAGGGGCTGAAGATCGCCGCTCACCTGAGGAAGGTGGGAG
CGATGCGGACGACCGCAGAGCACCGCTCATTGCGGGGATTCCCGCTGTAGTAGACGTCTC
GTACGACCCTGGTGTCGGAGGTCACCACGCAGGCCGCTCGGGTGGTGGGAACGCCCAGGA
AGTGCATGACCTCGCTGCACAGGAACTCCCTGATGCTGGAGCGCAGGACCTTGCGGCCAT
CAGCTTGTCTGTGGCGTGAAAAAGTAGATCCCCACAAAAAAAGGCAGAGATTTAATTCAG
TTGCACTCATCAATTTGCGTTAATGTGTAACAATCCCTTTAAACACATCTGCTCATTTAA
ATGACCTGTAGGTTTAAAGCTGTAATAACCCTTGTACCTTGAATAGGGAGTCAGTCCAGC
TCCTTTCACCTGCATCTCCCACCGACCGCTCGGGTTTTCCCGCAGCAGTTCCGGATCCTG
ACCGGGGGGCACCTTCACCTCCCCCAGGTAGCAGGCGGCGCCGTCGCCCAGCTGCCCGGC
GAACTGCCCGAACTGATGGCCGCAGTAGCAGTGCGCGGCGGGCTCGGAGCCGGGCATGAT
CCTGGACCCGCTGAGGTACTCCGGCGCGAGCGGGTCGCGCGCGACCTCCTCCCCGTTGAG
CCCCAGCAGCGCGAGGGCGTCGCGGGACACGGCCACGAACCGGGGCGCCGCCAGCGGCTG
CGGCCTCACGCGGGAGAAACACGCCCCTTTCACCGCACGCGCGCCGGGCTCCTCGGACGG
GTCCAGCGGGAGTCTCCGGAGGGCGACGTTGTCGAAGTCGAGCCGCTCGAGCGGGGAGCG
GCTAGTCACCAGACCCATGTCGGCCATGCCGGCCGTAGCGAGGAGTCG
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