SelenoDB
Release 2.0
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Transcript Report for SPT00001100_2.0
Identity
TranscriptSelenoprotein S (SelS)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001100
Transcript release2.0
External IDNone
Gene SPG00001004_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001100_2.0 # Transcript # Selenoprotein S (SelS) # Stickleback (Gasterosteus aculeatus) # Full length # Reverse
CTGACTTTGAAATTCATCAGCCAAACCTGCTGGTTCCATACCGATTACAGGAAGGGCGTC
ATTACAAGCTTTCAATTCCAAAATGCATTAGCAGATAATGAGGAGCACAGTATCTGATGG
TGAAAAAAGCCGAAGGACCAGAGAGAAAAAACACAAATCAAACACATCAAAAGAAAACAT
CGTCAGCTTGGTTCAGTCAGTCAGTGTGCACATCAGGATGTCAGAGGGCAAAGGTCAAAC
AGACCAACGTCTCCAACCTCCTTTACCCTCACCCTCCAGATGAGGGTCCTCTCCTGCCAG
GTCTCCAGGAGCAGGAGCTTCCCCCCTGTCCCGTCAGGGGGTTGTAGTCTGAAACACACA
CATTAGGAATATAGAATAGAGCCACTCATCGTGAGTGTGCGGAGGACACGGCCTCGGGAC
TCGCACAAAAAACAGACATATACACACATCTGAGGAGGACGGCTCATTTACATGAAGTCT
GACTGGAGCGATGAAGACTCGGATCAATCTGTAGTGTCAGATCAAATTATGAGAAAGGCT
GGTGGTTTTATGTCCCGCCTCCTGCATGAGCTCTTAACGGCAGCATCAACCATTTTACAG
CAAGTGGGAACACAACAACGTTCGTGGGATACAAGATTGTTGATAAAAGTGAGTTTTACA
TGCAGACGTCAGCGTCTTGGTGGGTAAACCGCTGTATCAACTGAACATCTGGTTTCGTTT
GTAGAGGCCTGGGAGATAAGTGATGAATGAGAACAGTGCGTTTGTTTCAAGAGGAAGCCA
GACCTCATGCGATGGCCTCAATGAGTGCTTGTGTGTGTGTGTGTGTGTGTGTATCGTGGC
TTTAGTGGGGGTTTTCTAGGTAAGGGTTATTCTTTCACAGAGTTTGTGTTTCACTTGAGA
GCTGCTGTGGAACTGTAGATGAAAATGAGCGCCATGCGGAGTCTGCTACACTACGCAGTA
TGGGACCGTTTGTGTTCTGTTGTACATAACTCATTGCACAACGAACAAGCTGAGCTATGA
TCTATGAAAAAAAACGAGATAGCAATGATCAAATGTCCACTTTTTAGATACAGCGCGTGC
TACCGATGGAGGTTCCATTGAGAGACAGCATGATGTGTTCATAATCTGTGCAATAAACGT
ATTGTTTGAAAGTCAATTGTGATGTTGTCATGTGTATAAATGTAATCTTGTAAAATGTAG
TTTTGGTAAAACTTTTTATTCAAGTTGGGAAACATTTATTTCTGAATGTTGTTTCTTTAC
GCAAAATAATGGATGACTTGAACAAAGTAAATGGGTATCATTTTAGATTTCTGATGGTTT
AAAATGATATTTGCATGAGCATTTGAAGGACGTACCTGCACTGCGAAGCGGCTTCTTATC
CGACTTCGGTTTCAGCGCTGTTGTTGACGAGCTGGCCTCTTCGGCGGTCTGCAGTGAAAA
GCGTCCGTCAGACATTACAGTGATGGACTCCGTTAACAGCCCTCAGAGTCTTTGATCAAG
AGTCGCATGGCAATTATACAAACACACACAAGTGGTGTCAGAGACTCGGGGGGAGGGTAG
CAGATTCTAAACCTGCTGACCCCAGACACAGGAACATTGTACGGCCATGTCAGTCTACAT
TTCATTGGGTTTAAAATTAGAGCTGCTACTAAAGACTACAAAAGAGAACTACAAGTACAT
TGTTTTTATTATAAAGAAGTTTAGTCTTCCGACCAAACAAATAGCTATCAAACTACTATT
GACAGTAGCTAATATGTACACATCATCGTCACAGGTACGGGAGCAACGTGGGGTAAATGT
CCCCGAGGACACATGGTAACGGAGCTGGGGATCAAACCGCCAATCCTCGGATTTAAGGAC
CAAGGGAACATGTGTCTAAAGGGACACACGGCTGAAGGGTACAGCTAGCTAACAGTATTT
AGCTCCTACCAAGATGCTAATGCGATGCAAAACCATGGCGGCTACTACGGCTCAGTCATC
CCCCAGCCGTGCGTCCCCCCCAGCCGCCGCTACTTCCTACGGTAGGTTTAATAATTATTA
TTGCATAATTCACTCACCGGAGAAGATCTAGTGGTTGCTTTGTAACTCTTTCCTTGTTGC
ATGCTCTCCCATATCTCGATTTTCTGCCTCCTCTTCTGTTCTTCTTGCTGTTTACAGAAT
ACATCACACTCAGTTGGTCTGACATCTCTTTTTGACAGATTCCTTTTGGGCCTACTGCAC
CTGTCTTTGTTTCTCTCTGAAGATTTCGGCTTTGGCATCGAGCTCCTGTTGCATCTTCAT
GCGAGCTGCTTCCATGGCTTCTTGTCTTCTTGCCACCAATGCTGCATCTTCATTCCCCAC
AGTAGAAATCATGACAATTAGCCTCCACAACTGAGCAATGTGCAGCATAGCAGCAGCTAA
CAAATAATGGACAGAATATGAATCAACAGGTTTGGGATGGCTGGTCGGAATAAAAACTCC
CCTAGGACTCCTGGTTGAGTGACCACTTGTACCTGATCATTAAAGTCACATTGAAAGTAC
AAGTCTTTTGCTGTTTTGTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTACCAGGAGGGGAGT
GACGCAGCAGGTAACCGGAGGGAGTGACGCAGCCGGTAACCGAGGGAGTGACGCAGCCGG
TACCGAAGGGAGTGAACGCAGCAGGTACCGGAGGGAGTGACGCAGCAGGTAACCGAGGGA
GTGACGCAGCAGGTAACCGAGGGGAGTGACTCAGCTGGTAACCCGAGGGAGTGACGCAGC
AGGTAACCGAGGGAGTGACTCAGCTGGTACGGAGGGAGTGACGCAGCTGTAACCAAGGGG
AGTGACGCAGCAGGTAACTAACAGAGGGAGTGACGCAGCTGGTAACCGAGGGAGTGACGC
AGCTGGTAACCAAGGGAGTGACGCAGCAGGTAACTAACAGAGGGAGTGACGCAGCAGGTA
CTGGGAGGTGCTGGTGCTGACCTTGCAGTGATGGTTGGGTGGAGCTGCTGGAGCTCTGGC
TGGATCTCCTCTTGCTCAGGTGCTGGATGAGCAGGTAAAGGAGGGCGGTCACAGCCAGCA
GGTACCATCCGTACTGGGACAGGAGCTCCCCGACTGTGGGCCGCACCATGCG
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