SelenoDB
Release 2.0
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Transcript Report for SPT00001107_2.0
Identity
TranscriptSelenoprotein U3 (SelU3)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001107
Transcript release2.0
External IDNone
Gene SPG00001011_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001107_2.0 # Transcript # Selenoprotein U3 (SelU3) # Stickleback (Gasterosteus aculeatus) # Full length # Forward
GTGTGTTTTCAGAGTGTGGAGCTGCAGGCCTTGTGGCGGGACCAGCCGGTGGTCTTGTTC
TTCCTGCGCAGGTTTGGCTGTCAGGTGTGTCGCTGGATGGCCTCAGAGATCAGCAAGCTA
GAGCCGGACCTGAGGGCCAGCGGCGTTGCGCTGGTGGGGGTCGGACCAGAGGAGTTTGGG
CTGAAGGAGTTCGTGGAAGGAGGGTTTTTGAAAGGATGTAAGTAGTTGTTGGTCTGTTTT
GATATTTAAATACCGAGCCCCTATGAATTTCATTCTGGTCTGGTATTAAAAAAACAACCT
TTGCTGCAAGACACTTCATTGTAACTTAAATAATAAATATCTGCATTGTCATTCTTGCAC
AAGCACATCCGACAGCAGTAAAACTGGGTGTGTCACGTGCAGGGCTGAAATGGTTTGACT
AACAATACCTATGTCTTGGGTATAGGACAAATTCAAGTACAGATCCAATGAACATGTTTA
ATGATTGGCCTGTATGTTTCACTGTGTAAACAAGACTGGGATCATTGATCTTTGTAAAAT
ATGAATATATATATATACATGCATTAGCCCAACAGCTTCAGTTCTGTACCCGGATTGTAA
AGGACCATCCATTGTCTTCTTCTTATAGCCATTTATGTTGATGAACAAAAGAAAAGCTAC
AAGGATTTGGGCTTCAAAAGGTGAGTAAAGTAAATCCACATTCACTTTGTGTAATACAGA
AGCTGTTTTATGTTTGATTTCCCCCTCCTGTCTATTGTCAAAGATGATTTTATCCTCATT
TACGTGCTTTGGGGAAATGTAAGGTCATAAGCTTTTGCTGCTCATGCAAATCTTCTCTCT
TTTATAAAAGATTTGTAATGATCTCTAATCGAGAAGCTGCGTGTCTTCACCCTCAGATAC
ACGGCCTTGAGTGTGGTACCTGCTGCTTTGGGGAAGAAAGTAAGAGATGCAGCTTCGAAG
GTATGTACCTGCATGTTTGTACAATTGCTTCACGCCTCATATTCATGGTCATAGAAGAAT
GGGGTAGAGTTCCCGACACCCAGAAGGACACTTAGACCTTTGACTCCCTGTCTTCTGCAT
TGTTTTCAGGCCAATGCTGAAGGCATCAAGGGAAACTTCTCTGGAGATCTGCTGCAGAGC
GGAGGCATGCTCGTTGTGTCCAAAGGTACAGTCGAATAGACCACAGGGGGGTATTACTAA
GGGTCTGACTAGTGAAGGTGTATAAAACATAAAAAAATAATCTTGATGCGGGTGGAGTTT
GGCCTGACGTGTATGTGAAGGTACAGAGATGGTCACAGCAATGCATCTATGCAGCCTGTC
CTCTAGAGGGCAATGCAGCAACACAAGATAGTTCTTCACTCCCTCTCTAACAAGCCGTGT
CTCTATTCAGTGGGCTGCAGCCTCCACAGTGCTCAGTCCTCCAACGACCGCATAGGCAAT
AGCGAGCGGCCTCTAAACCGGGACGGTCCGGCCTACAAGGGAACTTCCTGCTTGCGTCAT
CAGCGTTATCGCCGCTGTTCCCGTTACCGGCGTTACGTAACTTAAGCAATTTTTATAAAC
TAAGATGTGATGTTATATATTATTATTTAACAATTCTAGCGGTAGATATTCAAGTGAATT
CTATTACTTCCATTTAAAACTGAACTCTTCCCTCGCTGTCGGCTGACCTGCTTCCGTCCT
GAATAAATAAAATCCTGGTCAGCCGGGGAAGAGTTCACTTTTAAATGTAAGTAATAGAAT
CAAATCGAAGACGAGTCGCCGGTCGATGAATGTGTCCTAAAGGATGCAGCCCCTGGAATT
GAGACAGCAGTGCTCTACGGGTTTACGACTTTCCCCACTTCAAATACACATAAGTAATGA
AGGTTAAACTATTCAATTCATCCAACTTTGCAAATTTGCAATTGTGTGTCGGATGCAGTA
AAGTCAAAGGCTAAATCTTTTTCCCTTTTTAGGTTTTTATCACAGTAATTTGTGTTGATT
GATTTGAAGTCTATGCTGTGTTTTATTGTCTTTATTTGTCACGAGTTCACCAGAGCAAAT
TCATAATGATCTGTGAGTGCAATGAATGTGGTTTCCATGGCTGATTTCTCCAAAATATAT
TTTGCTCTGCAAAGGTGGAGAAAAGGTCCTACTGCATTTTATCCAGGACTCCCCAGGTGA
CCACGTACCTCTGGAGGATATTGCCAAGGTTTTGGATATCTCATCCAAAGCGAAAGCAGG
ACAAATGCCAGTG
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