SelenoDB
Release 2.0
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Transcript Report for SPT00001110_2.0
Identity
TranscriptThioredoxin reductase 3 (TR3)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001110
Transcript release2.0
External IDNone
Gene SPG00001014_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001110_2.0 # Transcript # Thioredoxin reductase 3 (TR3) # Stickleback (Gasterosteus aculeatus) # Full length # Forward
ATGCCTCCCATTGACAATGACCCCGGGAAGAAAGAACTGAAGTCTCGGATACAGCAGCTT
ATCGACTCCCACCAAGTGATGGTCTTCAGCAAAAGCTACTGTCCGTACTGCGTCACGGTA
AGGCAGCTACGTTTCGTTTGACGGCGAAGGACTCCTCGCTTACGCCGGTTGGAAACTTCC
ATCTTCCTCCACGAAGCGCACGCGGGCTCCGTCTAATTGCCGGTTTCCCCATTTCAAGTC
AGAGCTGCCAGCGACTACTCTGCGCCTGAAGCCGGTTTCAAGCGCTATTCATTACAAATT
AACCACACCACATAAAACCATTAACTTAACAGAACCGACATTGCTTCGGTATTCGAGATA
ACGTCCGGTCGGCAGCTTAACGTTAGTAGTTATCTGCTCGTGGTCGCACTTCTTCAAAGA
GTTGGTTACATAATTTTGAAGTTCACCCGCTAACGTAACTTGAACTGCCGCAAAGCAGCG
CTAACCCGAGTTAACCAAGCGGGCTATTCTATCAACAGCACGGAGGCCCAAAGCAGCGCT
AACCCGAGTTAACCAAGCGGGCTATTCTATCAACAGCACGGAGGCCCAAAGCAGCGCTAA
CCCGAGTTAACCAAGCGGGCTATTCGATTAACACAGAGTGGTTTATAGACTTCATTTCAT
AAAGCTGTGACTTGCTAATGGGAGGTTTGGCGTGTGATGAGGAAACCGTTAATAATTGTT
TGTTCGTGTGTTTGTAGGTGAAAGACCTGTTCAAAGAGTTGAAAGTGGATTGTAACGTAG
TGGAGCTGGATCTCATCGGTAAGATATTACTTATTTATTATTATACATTAAAAAAAAAAA
GCTTTTTTGAAATGTCTGCTCGCCACACGTTTCAATTTTGTACACTTTTTTTAGGAGAAG
TTAAACTATTGCTCACGGATGTCTTTTTTAAAATGTTTTGAGTTTTTTTTCTCCATTTGA
TATGCAACTGCGTCGGCGTGGTTGAGTTTGTCTTCCACTAACGTTGTGTGAAATCCTCGG
TGATGCAGTGAGGATGTTGCACTTCCCCGGCCGTGTAGCGGAGACATGCTGAGTCACTCT
CTGAAGACGCCCTTGGCCTCGCTATCTAGTCAACCCTCACCTCTGTACGCTGACCCTCGA
CCCTCCACCGGGCCTCAAAAGGATGCTGGCCATTCGTTTGGCACCGACGAGCTCAATCGG
CATCAATAATGTTACAGATTCAGCTGTCGATGTGTTGCGATACGATCACCTCGACCAGTC
TCGTTTAGTGGCCGTGTTAGACGGAGGGCGACTACAGCAACAGTGCGGTTGGTCGTCTCT
GACTGGCCTAGAAAGTGACATGTGACCTTCTGAAAAGCAGGTGACCCCTTGAGTGCAGCC
TCATAGTGAGTGCAGAAATCCCTTCTGTGGTTGCAGATACGGGAAAGGATCAAACGCTTT
GCACCGTGTCCACCCTCCCTGTTTTATTTGCATATTCACACTGCTGCTCATATTAAGAGT
AGCTATATTGACAGTTTGGCTACCAGTAAACTGTAAAAACTAACCAATCTTCCGCCCAGA
GGATGGAACCAACTACCAGGACATGCTGCTCGAGATGACTGGACAGAAAAGCGTCCCGAA
TGTCTTCATCAACAAGATGCACGTCGGCGGCTGTGACAAAACGCTGCAGGTGAGGAAGTC
AGCGCGTACGGATAGCGGAAAGGGTTCTGGTGGTTATTAACGCTCCAGCCGCTGTGTGTG
GACCAGCCCGTTTATACATCTGTATCACCATGTATTTGAAACTAGTTTGGTAGCTTATCG
CAACACGATCGAGGTGCATAAGAGCCGTGTTAATGCTCCCGTCAGGCTCATGAAGACGGC
AGCCTGAAGCAGCTGCTGAGCGGAGACGAGGCCTACGAGTACGACCTGATCGTCATCGGA
GGGGGATCTGGGGGGCTGGCCTGCTCAAAGGTGACACGCAGGGTTTCCTCTCCGCCGCTA
ACAGTTTACCACTTCTCACAGAGGAGGGTTGGGACGGCCCAGATTTACGCAACATGGCAG
TAAAACATTCTTTGTTATCAACAGGAAGCTGCAATGTTGGGGAAGAAGGTCATGGTGCTG
GACTATGTCGTGCCCACACCAAAGGGAACCACCTGGGGTAAGCCGCTTCCTCTTCAGGAT
ACTTTGCGAGACGCTTGTGATGCCTCAGACGCGTTTGAGTCCGTTGTTAATGCGTGAACT
GCCCATCAGGTCTTGGCGGAACCTGCGTTAACGTGGGCTGCATTCCCAAGAAGCTGATGC
ACCAGACGGCCGTGCTGGGCACCACCCTGCAGGACTCCCGCAAGTTCGGCTGGGAGTTCA
GCGAGACAGGTGAGGGCTCAGAGCGCCGCCCCCGGAGGTCACGGAGGGGGGACACCGCGC
CGGTTTGCCGCGGTAAATCAAGAGGCATGCCCGGTCAATGGTGTCTCGCCAGCGCTGCAT
CGACTCTGCTAACGGCCGTCTTGTCCGCCTTCAGTGACGCACAACTGGGACACAATGAAG
ACTGCAGTGAACAACTACATCGGCTCCCTAAATTGGGGCTACAGGGTGGCGCTGAGGGAC
AAGAACGTCAACTATGTCAACGCCTACGCAGAGTTCATTGAACCGCACAAAATCAAGGTA
AATGAGCCCTTCTGACTTCTGAGCAATTGTCTATAGTCTGTGTATTACACCTATAGATAC
AAATATCGACGGTGGCTTGAATATGTCTGCAGCAGTAAGTTGCTTTGCTCTTGTGCCTGT
ACTCGATCTCTCCAAACCAACCTTTAGTCCGTAACTCACCAAGGACAAACCGCTCAAACC
ACAATCCGTTTCAGCTTTGATAGACTTGACTAATGATATTTACCAAAACCACAAATGTTG
ATAAGCCCTCTATTTAGTTTGTTTTTAACAAGCTTTGCTAAAAATGTAACCCACAAAGTG
GGCAGTATGTGGCCCCGTACCTAAAATGCCTGACAGCCCTGATTTTAATCTCAAGCGTTA
TCTGCCTTTCAACAATGTTGTGTGTTGTCCCTCCCAATGCTTCCTGCACCCAGAACAAAT
ATTTGTCGGCCAATGTCGCTGTCAACAGTTTCTTTTTGGGTGTTTCCTGCCAGGCGACCA
ACAAACGAGGGAAGGAGACGTTTCACACAGCCGCTAAGTTCATCCTGGCTACGGGCGAGC
GGCCGCGCTACCTCGGCATCCCTGGAGACAAGGAGTACTGCATCACCAGGTGGGAGCGCA
GCGGCAGGCTGTAATCCGGCCTGTGTTTTTTTTCCAGCTTGCATGGTGGTGTTTGCCGTC
GGCGATCTTATCCTCTAGCCTTTGACGTAGAGCGTGTGTGTGTGTGTGTGTCTGCGGTTC
ACCCCGATCAGCGACGACCTCTTCTCGCTGCCCCACTGCCCGGGAAAGACCCTGGTGATC
GGGGCGTCGTACGTGGCGCTGGAGTGTGGCGGCTTCCTCGCCGGCCTGGGTCTCGACGTC
ACAGTCATGGTCCGCTCCATCCTGCTGAGGGGCTTCGACCAGGACATGGCCAACCGCGCC
GGGGAGCACATGGAGGAGCACGGAGTCAAGTTCCTCCGCAAATACGTCCCGGTGAAGGTG
AGCGACGGGGACATCTGCTGTGGTTCTGTCCGTCCTGGATCAGAATGTAGGATATGTTTA
GTCTGTGCAGCCCTCTGAGGAAAATTAGGGCTGTGCTAAATGTATTCGAATCGTGTTTCA
GCTGAATCAAGCATGTATTTCTTTGATGTGACTGGCTGATCTAAAATATAAAGCAGGTTT
TTAATTTGACTCATAAAGCGCACACCATAATTGTGCAGCATCAGATGTATTGTCACATCT
TGCATTATACTTTCTTTTTTTATCTGAGCTTGTCAGCAATGCAAAGACTGACTTGTGTGT
GTTTCAGGTAGAAGAGCTGGAAGCAGGAACTCCCGGCAGGCTGAAGGTTACATCCAAGTC
CACAGAGACTGATGAGGTCATCGAGGGGGAGTACAACACGGTGTGTACTGATCCATCTGT
TCCCGGTGCTACTGCTGGAGAACACAGTGTACACCTTTTCTCTATCCACCCGATAGGTCT
ATTTTTTTTTTATTTTTTTTTCCCAGGATGCTCTATCAAGCTAATGCTACCAGTGTAGCC
TTACAACTAGCTGGCTGGTTGTGAACTTCAACTATTACTCTGCATCCAAGTCAAGAGTCT
GTTAGCGCTGTTGGAAAGCTCAGGAGAGCAGGACAGCTGCCATGTTGAAGCCAAAACACT
TGCAAAAGGATAAGAGTGGAAATACTCCAACTGACATATGTATTAAAAACAGTTTTTAGT
TTCCCTCAGTCTTCAGCATTTAGCCTCGCGCCGACATCCACAAACACCAGCAATATTTCT
GCCTGACGCGAGGACGAGGACTGCCTTCATTTTTTTTTCCTTGACTAGAACGCCGCTTCC
TTGTGCCTCAGGTGCTGATAGCAGTGGGCCGAGACGCCTGCACAGACAAGGTCGGCCTGG
ACAAGATCGGGGTCAAAGTCAATCCCAAGTAAGTTTATTAACTTGTCCACACAGCCATCG
CGTTACATGGGCCGTCCTGCGCCTTTAAGACTCGTTGTACAGTCAGAGTGACTCAGCAGT
TCCTGTCCTACGGCTCCCTGCAGGGGACGGGTTGTGAGGGGATTTGTTGGGGGGGGCGCG
CCTTCTCTACCATACAGTGTGTCAGCTGCTTGTTAATCATGAAAAGGAATTACAGAAGCG
TTTTTCAGGCTGGTGTCCTTGTGGTGCATTTTTTGCTCTAATTTACATATTAAGACAACA
TTTTTTTTTTTTTCAAAATTTAGAAATAAAGTTGAACATTTGTACTGCATAAGCGCTTCG
CACATTACAAATGTGGGAGACATGTTTTTTGTGACTGATGGTTAAACGGGATTACGGCGG
CATGAGGCTTAAAGGAGCGCTCGGTGGGTCTCATGACCTCCGTATTACTCCGGAGGAGCC
CAGACACAGCCAGGGGGCTTATAGAGACTTTATCACAATACCACTATGGTTCTGTTTAAC
TCCTTCCTTTGTCTGACTTGTGAATAGTAGCCGGTTCTCTGCTGCGTTATAAAGGGACAT
CACTGAAACGCAAATCAGTCCGGAAGCTTTCGGTACATTTTCAAATGGGAACAAAATGTC
CACGGACGCAATTGGCCAGAACAACCGATAATACCAGACCAGGAGAATATGTGCTTGGTG
GGGTAAACACTGATCATCACTGATGCATCAGCAGGTCTGAAAAGGTCTTTCCGTTTTGAT
AATCCCCATTTTAAGATTAGAGGTCCAAACTTTTTTTGGACAAAAGTTCAGAACAATTTT
TTTTTTTTTGTTAAAAGTGGCCACAAGTGGAGTAACGAAGAAGCCGGAGACCAGTCTGTG
TTAAACTTTAATAATTAAGGGTCCAGGTAAGCTGCATGGATGCACCAATACCACTTTTGT
CTCCAGAACAAGTACTTCCAAGTACAACACTAATACCATCACAGGTCCCACAATACATAA
GAAGCTGCTCTGCACTGTGGATGTGGAACGTTTTTTCCGCGCTTTCGATTAAACTGTTGT
GTGTCGACTCGGATGCTGTTACATCACTATCATTTTTCCAAGTACACAATTAGTGTAGGA
CCTAATACTCGTGTCCCCGCCGCCCAGGAATGGGAAGATCCCGGTGAACGATGAGGAGCA
GACCAACGTGCCCCACGTCTACGCCATCGGAGACATTCTGGAGGGAAAGTGGGAGCTGAC
TCCTGTGGCCATCCAGGCCGGCAAGCTGCTGGCACGACGCCTCTACAAGGGAGCAACGCT
CAAGGTGCTCGTCACCACTACGCACGCACAGTACTTTTACAAACAATTCACCTTATCTAC
TGAGGCTACAACAAAGTGACTGGGCGGATGTGACATCGGCGCCTCCAGAGAGACCGTTGT
TGCTTCCCGACCAACCAGTGTTTCTCTTTTGGTGCAGTGCGACTACGTCAACGTTCCCAC
CACCGTCTTCACCCCGCTGGAGTACGGCTCCTGTGGTCTGTCAGAGGAGAGGGCCACCGA
GCTCTACGGAGAGGATCACATTGAGGTAACACACACACACACGATGTGACAGCTGGAGTA
AAGTCCTTCTCTCCAAATCAATGTAATACGATGAGAAGTACTACATTTAAGACAAAGACT
CCTAATAGCTAAATGTTTCTAGTGAACGTTGTTGGACGAGCATTCACAACCAGCCTGATG
GTTTTTAACACGTTGGGATTCGTTGCTCTTGCGTGTGGCCCTCAGGTGTACCACAGTCTG
TTCTGGCCCCTGGAGTTCACTGTGCCCGGCAGAGACAACAACCGCTGCTACGCCAAGCTC
ATCTGCAACAAGCTGGACAACGTAAGCTGCATATGGACACGGCCCCGTCGTATCGCGCCT
GTTAGCGTCGCGCCAATGACCGTGTTTTTGTTGTTGCCCTCGGCGCCGCAGGATCGGGTC
ATCGGGTTCCACTACCTTGGGCCCAATGCCGGAGAGGTTACGCAGGGCTTCGGCGTGGCC
ATGAAATGTGGCGCCACCAAGGAGCAGCTGGACGGCACCATCGGCATCCACCCGACGTGC
GCTGAGGTGAGTCAGCGCTTGTCTCTCGGCGGTCTCTGGCTTCGGTCAGGTGACTCGTCA
CACCCGCGGCCTGAAACCGTTCGCCTGGAGGCCGAAGATGAGTTGCTTTTGACTTTCTTG
TGTAACCTTTATAAGCAAAACGACCAACTGGCTGCATGAGCAGCGCGCCCCAGCAAAGGT
GTAGTAGTAGTCTAGACTGGAGCAAAATGCAGCCTGCTGTTGACCAACGAGACTGCAGGA
AGAGACGCCGCCCTGTGAAAGTCTTTAGTTTACAGCAAACTAGATGAAACACGGCCAGAA
GGCTGCACGTGTGTAGATGTCCTGGTGCTTCCATGTGGTCCAAAGAACCCCCCCCCCCCT
GCACTTTGATTAGCTTTGTCCAAGTCTAAAGCCCTGTGAAGGACGTCCCTGTGCGAATGG
TCCTGTAGTGGCCCAGCACACGTTTGATCACAAAACGTACCACTTCGGTAGCCTCTTCAA
TCCCAATTTGCAGATTCTAAGCCAGACAAATATTTTAATTTCTGTTTTTGTCCGCCCACT
GATGCGTAATGTGCCTCATTAACCTAATTGCCGATCTCACCGTTACGTGTTGATTATGTT
AATGCTGGACGGGGACAGTTGAGACGCATTAATCCTCTCAGTCCTTTGAAGATTTTCCGT
ACTTTCATTTCCATTTTCTTTTTAGTAAAGTTGAAAAACCACAGTGCACCTTGTTGTTGT
TCTCTCCGGAAAATTCCACATCCCCTCTTACCTGTACCTTGTTGGAGGTATCGGCCTTCT
CTCCAATGAGACTAGATGACCACGGTCGTGCACATTAAAATCCTGAGCCTCTGCTGAGAA
AGCAGCATAATAAAGAGTTTCTCCTGCTGGTTTCAGGTCTTCACCACGCTGGACGTGACC
AAGAGATCCGGCGGAAACATCACTCAGTCCGGCTGCTGAGGTTAAACCCTGCTCGTTTAG
CGGGCTGCTCCCACGTTAAGACTCTCAGTCCACCTCTTTCGTCCCGCCTCCCCTCCCAGC
TACGTGGGGGGGGACACAGACGCTGAGCTAGTGGTCTGATGTGAGAGCAACCTGCTGAAC
AGCGGGGTTACTCTGCTGATATTATTATTTTGTTATTTATTTATTTTCCCCTTTTTGGGC
TCCACCACTGTGTTCTTGTTGAGGAGCACCAAACGCACATCTGTGTGTGTTTGGGCTGTT
TGTGACGTCCTGGCCCGTAACCTCATCACTGAGGGGGGCGAGGATCGATGTCCCTCAGCA
GGAG
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