SelenoDB
Release 2.0
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Transcript Report for SPT00001111_2.0
Identity
TranscriptEukaryotic elongation factor (eEFsec)
SpeciesGasterosteus aculeatus (Stickleback)
Transcript IDSPT00001111
Transcript release2.0
External IDNone
Gene SPG00001015_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001111_2.0 # Transcript # Eukaryotic elongation factor (eEFsec) # Stickleback (Gasterosteus aculeatus) # Full length # Forward
AAAACGTTAAATTTCAACGTCGGGGTGCTCGGCCATGTCGACAGCGGGAAGACGTCGCTG
GCCAGGGCGCTGAGCAGCACCGCCTCCACGGCGGCCTTCGACAAGAACCCGCAGTCCCGG
GAGAGGGGCATCACGCTGGACCTCGGCTTCTCCTCCTTCACGGTGGACCTCCCCGATCAC
CTGCGGGGCAACGGCGGCCTCCGGCAGCAGCACGACAGCCTGCAGTTCACCCTGGTGGAT
TGTCCGGGTCACGCCTCCCTCATTCGCACCATCATCGGGGGTGAGCTGGTTTAACTGCGC
ACAGGTGGTGGTGAATTAACCAAAGATGCGTAGTTCAGGACACGTTGAGCTCATACAGCA
GTGGACGGTTCTTACCAGCTGAGGCTAAAGCAAGTTAGCCAATTTATACAGTCATGTCTT
CAAAAACCCTCAAATATATTCTAGCTTTTATGAAGGTCAGTATGTTCGTTGAACTGTTCT
AGAAATGTGTTTGTTTTAACGTAATTTTTTAAGGTGCTATTTGGGTTGGTGTTGACTTGT
ATGAGTTTTGTCCGCAATGAGTGTGAATTACATATTATGACAACCTCTCACTAAAAACAA
ACAAACAAAACATTGTAACCTCAATGAAGCTATGGTTTACTTCAGGCCTGTTACGTTTGA
CTGCGTTAGGTTTCATTCATATGCTGCTAACTGAATGTGATGTAAATCCACAGCTTAATA
TGAAAAACACCCATAAATATACACAGGCGTTTCTAAAATCAGCAATGTATTCGTTCCAGT
CGGGTGTTTCAGAAACTGCTTGACTGAAACCAAAGTCCAAGTTCTTAATCTTCTTTACAG
ACATTATCTGAATATAAAATGCCCGCATATTCATTCAATAGTTTAGCTGCCAAAGAAGCA
GTACAGTCCATATAGCATCTGCCGTTTAATCTGGTCAGATCAGTGCATGCTGTTTATACA
TTAATAAGAAAACTATATAGCTCAAGTATTTTCATTTTATGGAAACTTAAACTTTAACAG
AAAGAACGGTTTTCTCACAAACCCACAAAAATGGGGTCATAAACAGAAATTTGAAATTTC
TAGGCTCAATTAACACGAACACATTGGTACAATATGGAGTTTGTACTATGGTGTTGTTAT
CACGGTCAATAACATGGTAGAAAAGAACATAACCCAGAGATGTTACTGTCAGAAGGATGC
AGTCACAGCCGGGTGGTGTTTACACCACATCCTCACTGCATTGCATGAATGTGACCTACC
CAGCAGAGGGAGCCTTTACTCTACAAGCAGAGAAAAGCTCATCATGCTCAATTGGAGTTT
AAGTTGGTCTTGAAGGCTCTTCATGACATATTGACCAAGAGCTGCAAAGATAAATCCGTA
GAACACAATTATTAAATAACAATTGTATAATCAATGAATTGTTTTGATCAATTATTCAAG
AAAAAGTTCTTTCCTCGTCTGATTTTAATCTTTTTGAATGTGAATATTTTCTAGTTTTGT
TACTCCCCCATTACAGTAAACATCATACCTTTTGAGTTGGGGAAAAAAATTTTTTTTATT
AGACCAAGCAATTAATAATTTAATTGCGGCAATGAGGCAATAAATCTCAATACTAGCTGC
AGCCCCAATTGAATTGATTTATTATACTTCATCCGCAGCCTTTTGGTAAAGATCTTGGTA
CGACAGCAGAGGAGAGGCACCCAAACACTGAACGCTGCCGTGTCGTGTAACCAAAGCACT
AAATGAAATGTACGAGCCAGTGGGGTGTCACATGCTGTAGATTAGGGAGGAAGGAAACTG
GGGTTCGGGGCATGTATTAAACCTCCCCTCCTGTCCCAAGTGGGAAAAGGACCGGAAAGA
GAAGGAGCCAAATAGAAGAAGAGAAAAGAGGGGAACACAGGAAAGAGAGACTGCCAACGT
TGGGGAAAGAAACGAAAAGAGGGAAAGGAAAGACAACCAAGTGAACTGCAGCTCAACCCT
CCAGCCTTTTATTCTCTCTTTGCCTTCACGCACCCCTCCCCTAACTTCTCTTGTTCTACT
GTTGTTTTTGGGGAGCTGTGTCCATTCCTGGTGGAGTGCTGTTGTCGGTTTAGTAGTCTC
TACTCACAGTTCTTCTAAAGGTGCACAACGGCAAAGCTGGAATGTCTTAAATAGCGAACC
GTTAGTAGTTAGTTGTGTTCTGATTCAGCTTGTTTCTCTTCTGTGTCAAAAGTATCTGAC
ATCCCACTGATTATTTTCTGCCCTCTTTAGGTGCCCAAATTATTGACCTGATGATGCTGG
TGGTGGATGTGGTGAAAGGGGTGCAGACTCAGACTGCAGAGTGCCTGCTGATAGGAGAGC
TGACCTGCCCTCGCATGGTGGTCGTCCTCAATAAAATTGACCTACTGCCAGCCAACAAAA
GACAGAGTGCCATTGAGAAAATGACCAAGAGACTGCACAAAACTCTGGAGGGCACCAGGT
CTGAATCCCATACAAGTATAAGAACACATTGGCATATATATATATATATATATATATATA
TATATATATATATATCTATGGCATATATATATATATATATATATATATGCCATATATATA
TATATATGCCATATATATATATATATATATATATATGCCATATATATATATATATATATA
TGCCATATATATATATATGCCATATATATATATATATATATATATATATATATGGTTTGG
GCATCCCATGTAATCTCAGTGGCCCAGGATTTGATCTCTTGCCAAAATTCCTCATTCATT
ACACATTCTTTTTCCCTCTCTGGATTCCACTGGTCTGTCCGTCTGACCCACAGTTTTTTT
AAATTCAAATTAACTTTAATAATTTAATTATAATTATAATAATAATAATAATGTAAATAT
CATGTTTATTTCTGTTGACCAGATTTAAGGAATGTCCAGTGATTGCTGTGGCAGCAAAGC
CCGGGGGCCCGGAGGCTGCTGCCCCAGAGGAGCCTCACGGAGTGCCAGAGTTAATAGAGG
TAAAGTCCGGAAACACTCCGGTTTCCCTCCATAGTTACTAATTTAGCCCAAAAGAGCACA
TAAGTTCTCACTTATGAACAAGTGCGGTCAGTCAGCTGACAGACTGCTGCTATTCAAGTT
GTGTTAAATTAAGAAAGAAAATCTTCAGCTACTACAAACTACTACACATACTTTCTTTAT
CCAGTCAACATAGGTAGGTAGTATATAGTAGTACAGGACGTGCTGTCTGTTTATTGCTGT
ATAGATAAGTATATCTTACATTTGTTTAAAACATGTTGACATCCAGATATGTAGTGTACA
GACATTTGGACATTTTTCATTGAGGAATAAACTAAGTCAATACTTTTCGATGGAAAAACA
ATACAGTGGATAATCTTATCACGTGCATAAATAAGTCGACATTATATGTGTCCTTATTCT
TGCCATCTTGGTTTTCCGTGTCAGCTTTTGAAGAAGCAGACGTACCTCCCTCAGCGAGAC
CCCGGAGGTGACCTCCTCATGGCTGTGGACCATTGTTTCTCCATCCGCGGTCAGGGAACC
GTCATGACTGGAACCATCCTGCAGGGGTCGCTGGCCATCAATGACACTGTGGAAATCCCA
GCGCTAAAGGTATGCTTAAAAATACATGAATTCAAAATCTCTGATATTTACAGGCAGGTA
ACATATCAGAGCGCTGGAAATCATTTTGTGGGAGCCGCAGAGACTCGGAAGTTCAGAAGT
TGAGTGGAAGCGGGCAGACGGAGGGAAGGATGTCCCTATGGGTGCAGAAGATGTTTTAGT
TTAATGTGAGGGAAGGATGAGGGGACCCTGGGTCCGTGGGTAATTTGGACCAGATGCCCA
CTTTCAGCCAGGCTCAGCAGTTCTCTGTACATTTCTCTTGTCCACCTCTTGGTGGCAGCA
AATGGCTAAATTAACAGTTATTTGTTATGGAGTGTTGATCTGTGCCTCTACTGCTGATCT
GTAGTAGTGAAATAGACAACAAAAACAAGCACAAAAAAATTGTGGTATGCCATATCCCGC
AATCAAGGATTGTTGGTTTCCGTTCTCAGCTGCAAGTTCTGAAGCAACAGTGCATATTTA
ATGAAAATTGTATAATTTTTAGCTCTTAAATGCAAAAACTAGGTGGAAGCTGAATAACGA
TTGATTGAAATGGTAAAAAACTAACAACAAACCCATCCGTCGCTGCAGCATTATGAGTTA
AGACAAAGTGTATTCATCAGCCATAATGTACCGTGCTGTGGATTGATGTACTTCATGCTT
TCTCTTGTCAGTTGTGTGTAAATATACCCTTAAAGAAGTATTAATATATTTTGCACTTGT
ATCTCTATGCTCTCTGACGTTAGGTGACAAAGAAGATAAAGTCCGTGCAGATGTTTCGGA
AGCCAGTGTCGGGCGCCATGCAGGGGGACCGCGTGGGTGTGTGTGTGACACAGTTTGACC
CTAAACTGTTAGAGCGGGGTGTGGTGTGCACCCCAGGGTCCCTGCGCACCCTGTATGCAG
CAGTCATCTCTGTGAGGAAGATCGGCTACTTCAAGGGCTCTCTTGCCACCCGCGCCAAGT
TCCACATCACAGTGGGTCATGAGACGGTCATGGCGAGGGTGATGTTCTTTGGCCTGCCAC
CTGCTGATGCCTCGCAGCCGCCCTCAGACACTAAGCCGTCTCCCCCTCAGCCCTGCTCAC
TGGACTCCCCCTTCTCCTTCGAGAGGGAGTACTTCTACCAGGATGAGTATGTCACTGGTC
AGGGAGAGGCCAGTCCGGGTCCTGAGCCACAACAATGGGCCTTGTTGGAGTTTGAGAGGC
CGGTCACATGCCCCTCACTCTGCCTGGTGATTGGTTCCAAGCTGGACACAGATATCCACG
CCAATGCCTGCCGGTTGGCTTTCCAGGGCCGTTTGCTGCAGGGGTTTGAAGATAAAGGCT
ACGCTGAGACGGCCCTGCCTCGTCTGCGCATCTACAAGACCAAACACAAGGAGGGTCAGG
TGGAAAGGGTGAGTGGGACACGCTTTCTATTTGAAATGAGTCTCTTTTTTTCGTCTTTTC
TGACTGGCATCTTCTCTGCTCACCCGTGAGTGGTACCCTTCCTCCTCTGCCCTCTCTGTC
ACCTTGCGCTCCCTCTAGCTGTGTTTCCCCTTTGGATGTTTCTCATTGCTGGTGGCAGTG
GACCGTGCCTGGCAGACAGAGCCCCTATTGTAAAGTCATAAACATGCACACACAAACAAC
CACGCACATTCAGCCCTGGTGATCAGTGTCTCCGGCTCTGGCTGGGTGTGCATGCCTTAG
CAGGCAGCGTGACGCAGAGGTGTGCGTGGGTGGCGCACTGACGCCACCAGCTCTGTCTGC
CTGTCAGAGGTTGGCCCTGTTTGGATACACCTGAGCGGCGCAGGAATACCCACATGGCTG
TGTCAGTTAAGCGCCACTTTCTTCCTGCTCAGCTTCTTTCTCTCTCACACATGCACATTG
CTTTTTGGTCCAGTGAGACTGTTGTTGCGCTCTGTCCTGAATCCTGAGCTCCCGTTCATG
CCGAGCCGATCCATATCTCGGCTTATCTGATGCTGTTTCTTTTTTCTTATTGATTTCAGC
TGATTTGAGAATTTTTCAAGAAGTCAGGACCCTCCAAACTTCCACTGTTTGTATTCCATC
TGAACATGTAGTGACTCTCTTCTTCTGCCCTGTACAGTTGAGTGTTTCTGTGTGCGCCCT
TGTCAGGTTCAGCCTCAGGTCAGGGGTCAAGCGTGTGAACTAGTTTCCTGCTGTTAGCAC
CTCAGGGTGTTGACAGCTCCAGTCAGTGACTCAGAATTGGAACAGCGTGAGGAAGAAGTC
AGACTTTGGTCATGTGGCATTACGTTTGTTCTTCATCTATCTCACAGAGAGGGGCAGTTA
TGGTCCTTTTTGTGGAAGAACACATTGCTGGCATTGTCGAGACGTGACGGCCTCCTCTAG
TCACAATTCATACGTCTGTCAGACGTGTAAAGCAACTGTATTTTTTTTAATCAGCGCATC
AGTCACGCTGGAGGGACGTCTGGGTCAAATGTTCAAGAATGAATGAGAGTCAGGCAGAAG
AGAGGGAGAACGGGTAGTGGGGGAGGTCAGTTGGAGACAGAGCGGTGCCCTCATGTTATC
AGATTAGTGCCGGGTTAGATCGACTTAGTGATGGATGATAAGAAAGAAGTACAAACAAAT
ACAACATAAAATATGCAGTATGAAAGGGATAGAGTGAGACAGCAAGGCGGCAGGCCTCGG
AGAATGTGGCTTCTGGCATGTCATACAGTTGGGGAGGGGACACGGCAGACTATCAGCTCC
TTATCCTCCCTCTGCTGTCACGAGTGAGTAAAATCCTGAAACGCCACAAGACGTGGACAT
CAGAGGAATTCAATATGAGATTCCGCTACTAAAATACACCCCGACATTTTCACACTCATA
AACAGATGATCACATAACACTGTATTAAAATTCTTTGTATTTTAACGCTGCTCTTTCCTG
CTCAGGTGACTGACGATTATTCTGTGATTGGCCGCAACCTGTTCAAGAAGGAGACCAACC
TCCAGCTCTTTTTGGGGTTGAAGGTCGTACTGTCTACAGGCGAGACTGGCGTTGTGGAGG
GTGGGTTTGGCCAGAGCGGGAAGTTCAAGATCCGAATACAAGGTAAGGTTCACCTGAGGT
GAGACGTTACTGCATCTTCACCTCTGTTTCACCATGACCAAAACCAGCGCTGCTGCGTCA
CGCCCATAAAACTCCCTGTAGCTTTTAGGAAGGTCGCATCGCCACGTCTTCAACAAATAC
ACACATCCAGAGCACTTTCCCGATCGGGGCTCTGCGGACCGTTTTCAGGATGCGGTAATA
GTGGTAGGCCCGACATCCTGAGCCACATTCCCAGGATTCCTCTGGGGATTGCCTGTGTTC
CGGGGGAAGTCTGTTCCCTGTTTATTTTACCTTCTGTTGCTCCGAGCCCACTGCTCCACA
CCGGGAGGGAAGAGAAAACAAAAACATTTAGAAAGAGAACCTCACCTACATCCTCTTCAT
TCTCAAAAGTCTGAGACACCGTAACGCACACTTCTCCTGGAATACAGACGTTCAGCGGTT
TTCATCTAACACTTTAAAACAGAACATTCTGTTGATAAGATAACAATTAGTTTTCATCAC
CTATTCATCTACTCACTATTATCCGTATTATTACATAAGAACTGTGTGGTTTCCTTAAAG
CCTAAGGCAATACGGTCACATTTGTTGTTCTGCTTGTCAACAAAAGAATAATTTTAGTAT
AACTCAAAGAAAAGCAGTAAATATGATCACATGTGAAATCTTGATTTAGAGTGTTTTGTA
ATTCGTGTTGATAAATTCATTCCTTTATTCTCTTATCTGTCATAAGGAAAGGAAACACGG
TGGTCTAAGCGTGATTTTATACTGCTCCTAATAAACTTCACTTCACTAACCAACTTAACT
GCCGACACTATTTTATTTCTCCACCAAAGCTAAATTTGACATCTGGTGTTTTTTATTTTG
GATCTGAATCTACTGTCGAGTATGCGTACGCCACTAGTCATCCGTAAAAATGCTTCACGT
GCACTGATCTTGATTCTCAGGCTTTAGTGGTTCAGTTTTTTTTATTACACAGTAGTTGGT
AAACATTTTAGACATATCTTCATTACACAAATACAAATGTATTTAAGGGCAATTCTAATG
TCTCACTTGTATGTGAACCGAAATCACTGACGTTTGGCCGTGCGAGTGTGTTCTGTGGTA
ATAAACGGAAATATTTAGCTGATCATAGATAACGAGAAGATTTCTATCTGCACTGTAACC
ATAACAACCCTCACACTGGCATAACCATAACAAGAAGAATGCTGGCGCCGTTGTACGTGA
GGTCAGACAGCCAGCATGTAAAGCAGTGAACCTATAACACTTCTTACCTTCCTTGTGTAG
AATGAGCAGCCACATGCAGAGAGACGCGGGGTTAGATATGGCAGCGTAGCTTCATTTTTT
AAATGCGTGCACAGGCTCACGGCTCAGTGCACCAGAGCACGAGGCCCAAGTGACAAACGC
AGAACGTGGCAGAGCGACCGGTTACTTCTCTTCTATTGGTTCATTGGTTACATCAGGAAG
ACTGAGGCATCAGATCCAGTACCTACTGCACACATAACCAGGAACAAAGGCTCTCTATCC
AGCACTAGATATAACTACACTTAGATGATTAGGTTGACCCAGGTGCTGCACACAGTACAA
GACCGATGTATTACATAAAGCAATCTATAATGATTTATTTTTATTTTTATAGATCGGCCT
TTTTACTTGACCTGCTTGTTTATCTTTTCTCCAGAGGGCCTTTTCCCTGAGACCAAGCAG
TTGTTATCCTCCACCTCCAAGAAGAAAGGGAAGGGTGGAAGCAAAAGTGGACCAACAAAT
GAAGAGGAGCCCAAAACAGATTCTCAGCCCGTTGCCATTCATTTGCATTTCAAGCGGTAC
GTCTTTGATCCCCATAAAAAGATGGTTCAG
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