SelenoDB
Release 2.0
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Transcript Report for SPT00001194_2.0
Identity
TranscriptSelenoprotein M (SelM)
SpeciesIctidomys tridecemlineatus (Squirrel)
Transcript IDSPT00001194
Transcript release2.0
External IDNone
Gene SPG00001098_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001194_2.0 # Transcript # Selenoprotein M (SelM) # Squirrel (Ictidomys tridecemlineatus) # Full length # Forward
ATGAGCTTCCTGCTGCTGCCGCCGCCAGTGTTGCTGCTTCTTGCGGCGCTTGTGGCCCCA
GCCACCACCGCCACCACCTACCGGCCGGATTGGAACCGTCTGCGCGGCCTGGCCCGGGCC
CGGGTAGAGGTGAGTGAGCCGGCCCCCAACCCCAGCACCACAACCCGCAAGCCCTACAGG
CCCCACAACCTTGAGATTAGTGTTCTCTCTGGCTCCAGGAACACCCCGACCCCCGACCGC
CCTCCTTTCCTCCCCCAAAGCGCCAGGACCATCCCTCCCCCTCCCCAGCCCCCGGATGCT
TACCTTTCAGCCTGGCATCCCAAACCCTTGCCTTTCTCTCTTTCTGGCCCGACAGCAGGT
CCCTGGACAAACAGGCCCAGTCTCTGACTTTTTGCTAGTCTAGGACTCTCCCCAAACCCG
CTTCTGGGAGCCCAACTTCCCATCCCTCTTATCACTCCACTTATTCCTGGAATTCCTCCC
CCATCCCAGTTCTAGGGCTTGGCGCTCCAGAGAATCTCTCTTCCTTCTTCTGGGGAGGAA
TGACTTTCTGGGCACCTCCCTTTACTCTGCAGAAGCCAGGGAAGGGGGCTGGAAACTCTG
TTATCAATACTTATTATGCAGCAGTCCCCTTCAACCTCCCCGACCAGGAAATTCCATAGC
AAAGTCTGTCTTACAATGTGATTTGAACCATCTCAGCTTCTCTCAGAATCTTAGTTTCCT
GTCTGACAAAAGTGGGTAGGATGAAGGAGGCTGGAATGGGTGGTCCTGGGGTCTGAACTC
CTGCTGAGATGGCCTCTCCTCAGGGAATGCATAGAGGGATGCTCCCATCCTACCTTAGGG
AATCTGACAGATGGTCTGTGGAGCTGGGCCACAGGTGGCTAGCAGGGCCCCACTCTGCAT
GGGTGGGGCAGGGACCAGATGGCAGGTGCCTCTAATGGGGGCCCCCAGGGCAGTTCTGAG
TTGTTTCCTTCTGGTCTGCTTCTTTATTGAGATTTCAGGGGCAAAAGGTCAGACCCAGGT
CTCTACTTCCTGAGAAGGGCAGAGCTATTATGTCTGTCTTTAGGAATTAATGATCAATAG
GTTCATTCAAGAGCCCCAGGGCTGGCAAACCCCCTATGGGTGTCTGGCCCTGCACCTATT
TCATTAGTTTCTCTAGGCTTGAGTTTCTCTCACCATAGAGTTCCTCCTTCTGCCCACAAG
GGACCTTCATTCGCCTCCTTCATTCCTTGGGAATTGCTCTTCTAGGGATAACTCAACAGT
TCAACCCAATTCAAGGATGAAGATGTAATGGTCTTGGGGGTGAGATTAGGGTAAAATGAG
GCACTTCTGACCTATCCCATTTTGTCCCCCTCCAGACCTGTGGAGGATGACAGCTGAACC
GCCTAAAGGAGGTGAGTTTGAAAGAAGGGGATATCTGGTTCTGTATCCCTCGAGCCTCTT
GGGGAATGGCCAACATGATTAAAAAAAAAAAAGATAGGGAACAGAGGAAAGGGAAGGGGA
CATGTTCTCTGATGCTCTGGTTCCTCCCCAGGTGAAGGCATTCGTCACTCAGGACATTCC
ATTCTAGTATCCTTTTATTCTGGAGAAGGGGACATGAGGAGGGCACCTGGGAGAATCTCC
TTTTATTGAATTTCACAATTAAGAGATGGTAAATAGTTTTCATTGGACAACAGAATTGAT
TGGTATTGACTGCCCAGAGGATTCTAAAGTGGTCTTCAAATTGGGTAGGCAAGAAAGAAA
CTGGAGATAAAGACCCTTTATTTCTTTGAACCCTAATTTCCTTGCGTATAAGTGGGGATC
CCATTTGGGCACAGAATAAGCATTCAGCAAAGGCGGTATTGCTGGCTCCAGGAGCCCCAG
CTCCCTCTGTCCACCACTACTCCCCTTAACACTCCTTTCAGCCACAACCTGGTGATGAAA
CACCTCCCTGGGGCCGACCCCGAGTTGGTGCTGCTGGGCCGTCGCTATGAGGAACTAGAG
GTGAAAACTTGGGAGGCGGGTGGGGGCGGAGCGAGAGTCGGGGTTCGACATGCTGACCTC
ACCCCTTCTTGGCCTCAGCGCATCCCACTCAGTGAAATGACCCGCAAGGAAATCAACGAG
CTGGTGCTGGAACTCGGCTTTTACCGCAAGGCTGCGCCGGATGCGCAGGTGCCTCAGGAG
TACCTGTGGGCGCCAGCTAAACCCCCCGGGGAAGCTTCTGACCGCGCTGACCTGTAGGTC
CGGAGGTGCGGCGGGGCTGGAGCCACCCTGCCAGAGTCCCGGAGACCCAATGAAGCGCTC
AGCATCCCGGGAGCGCCTCCCTTGCTGAGGGCCGACACCTCGTCTCCGAG
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