SelenoDB
Release 2.0
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Transcript Report for SPT00001200_2.0
Identity
TranscriptMethionine-R-sufoxide reductase 1 (SelR1)
SpeciesIctidomys tridecemlineatus (Squirrel)
Transcript IDSPT00001200
Transcript release2.0
External IDNone
Gene SPG00001104_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001200_2.0 # Transcript # Methionine-R-sufoxide reductase 1 (SelR1) # Squirrel (Ictidomys tridecemlineatus) # Full length # Forward
ATGTCGTTCTGCAGCTTCTTCGGGAACGAGGCTTTCCAGAACCACTTTGAGCCAGGTCCA
GCCTGTCACCCCTGCCGGGAGGGAGTGGGGTGGAGGGCGTGCATAAGAAGGGGAGTCCCC
TCACTCCGGGTGGCGGTGGAGTCCGAGTCCGGGAATGGGACGTGTGTGGCAGCTGATGAG
AAGCGATCGAAGGCAAAGGGGGTCGAGGAGGAGGAACCCCGGAGGTCCTGGGAGTAGGAG
GACCCCAGGGGAGAACTGGGGGAAGCCGTGGGTCCAGTTGTGTAGCGGGTGGTGAGGAGG
CCGGGGTATACTGGTCTTCTGAACAGCGCGATGGAAAATCTATCTAGCCCAAAGGCAGTT
CGGGTTCCCATTTCGGCTGGTGAGTGAGCAAGCACAGAATAAAAATGTGCCCGTCTGTGT
CCTCCCCCACCTGCCCATGCCTTCCGGGTTGGGTATCCAGGGGTGCAGTTTTTGGCAGCT
GTCAGTGAAATTTGGCAAGTGACTAAATGGATGCGGCAGTTTGGGGCATACCCCAACCTC
AGTCCTGGCCCCAGGCCGTGAGAGGCCCTGGTAAGTTGTCATCTAGCTGGTTGAACTCCT
GATAATGGACTAATTTGGTAAAAACACATCCACAGGAAAGACTAGGGCACAGGCCTCCCT
GGTATGGGATCTGTTGAGTGTTAATCCTCTAGGGGACTGGCTTATGACACTGAGCATTAT
GGGACCAGCTGTGACACAGGACCATGAGGGCAAAGCTGTTCCTTGAGACCCTCTGGCTAT
GAGACCCCGCTTGTCCTATGCCAAGGGAAACTCCATTCCATAGCATCTTCTAGTTCTTTG
CTTCCTGCTTGAGTTCCTGGTAAAGGCTGAATAATTCACAGACTTCAGGGGAGGCTGTCC
CCAGATAGGTGGGGAGTGATTCAGTACCCATGGAGTTTCCTGTTTTGAGTTCTTCAAATA
ATCTGCAAGTCAGTTTTGCAAACTTCTCTGCCCCTGCCCTCTCCACCACAAAGTGATCTT
TTGGGGATGGGTTGAAATCTGTTCTCTGGGCCCCTGTCTTTCTGGGTTCCCTGTCTGCTG
GAGGCCTGTTCTCTGGGACTATCTTCTTCCTCCCTGGAGAGCAGGCCAGTGGGTGGGTGT
CCAGTTCAAGGCTTTGTTGGGTAGTAGGATAGCTTCCTGAAATGGGAGTGGGGCCAGGTG
GTCATGCTGACCACTCAGGGCCTCTCTCTGTGGGTTCTGCAGGGTGTGGTGAGGTGAGTG
CTCTGTCCCTATCAGATTGCCTGGGCTTCTTCCTGGCCACATACCTCACTGGATGTCCAC
AGTGCCAAGCCTCAACTTCCTCATCCGTAAAATGGAAATGTTAAAAGATTCCAAATCATG
CAGCCATTGAGATTTCTCTGCCTTTACTTTCTCCACACTCCAGGCATCTATGTGTGTGCC
AAGTGTGGCTATGAGCTCTTCTCCAGCCATGCGAAGTACGCACACTCATCCCCATGGCCA
GCATTCACTGAGACCATCCACGCTGACAGTGTGGCCAAGCGTGCGGAGCACAATCGACCT
CAGGCCTTGAAGGTGGGTGACAGTGACCAGAGTTGGGGGCTTATTCAGGGAGAGCTAGAG
AACCAGTCACGTCTTCCTTCCTTGCTTCCCCCACAACTCTTGGGAATTCCAGGGTGACTA
TTTGAGGCTTCTAGCCTCAGCAAGGGGACTGCCACTGCATACCTGGGGAAAGCCTAGTGT
CCTGGTGGAATGCGGGCATCAGGGCAGTTTCCCTACCTAGGCCCCCAGGACGAAGGTCAG
CCTTCCACAGTAGGACTGGCTTGCACCAGGGCTGTCTGATGGGCCAGAACTGACATGGCT
ACCTTGTGGGCTTCCCAGGTGTCCTGTGGCAGATGTGGCAATGGTCTGGGCCATGAATTC
CTGAACGATGGCCCCAAGCCTGGGCAATCCCGATTCTGAATATTTAGCAGCTCGCTGAAG
TTCATCCCTAAAGGTAAGCTGACCTTCTGCAGCTGGAGGACAACTACACACACTGCGGAG
GTCTGGGGCAAGGGAGGACACATCTGTGCTTATTCACTTTCTTTCTTTTCTTCTTTCTTT
ATTTTTTTTTAAAGAGAGAGAGAGAGAAATTTTTAAAATATTTATCTTTTAGTTTTTTGG
TGGACACAACATCTTTATTTTATTTTTATGTTGTGCTGAGGATCGAATCCAGCACCCCAC
GCATGCCAGGCGAGCACATTATCACTTGAGCTACATCCCCAGCCCCTGCTTGTTCACTTT
CTATGGCAAAGTATCAGGGGCACCAAATCACACTGCCCACAACCTTCCCAGGGTCACCCC
AAAAAGTGGCTGCAAATTTTAGCTCCCTCTGTGTGATCCAGAGGGGGCATCTGTGGGAGG
GTATGACAAAGGGTTTTCTCTGGAGTCCTGGCCCTTCTTATAGCTACAGTCAGTAGTTGG
GGCCAGCAAAGCTGAGGACCTGGGTCATGTGCTGTGTGTCCCTGTGGTCGTGATCTCAGG
CTTGCTTCTCAGCCTCTAAGTTTGCCTCCTCCTCTGTTTAGTGCCTGTGATGGCAGAGCC
TCTTCCCAGGGCCGATAAGAACGGCTGCATGGGATGCAGAACCCTCGGGCCTGGTACATG
GTGCGGTTCAGGACACCTGTGCCACTGCTGGTGGTGTTCTTGGCTGTGCATTCTGCCAGC
TCGGCTTCCTCTGTCTGCGGCTCACCTGCTCACAGGGAACCTTGTGCCTCAGCAGTCTGT
CTGCAGATGCAACTGCCTGTCTCCTCCCCGCACTTTAGTTCTTATCTCAGTGTTCCCTGG
CTGTCACCAGGACCTCAGCCATTCCCTTCATCTCTGTTTCATACCCTGTGGAATTGGGCT
GTTGTCTTTAGCACATGCCACACCACAAGCACAGTGGGGTAAAATGAGCATCCTCTGAGG
GCCTGGTGCATGATTAGCCTGAGTGGTGTTTCTGTCCTTTCATCATCTTTGTCCCCTGTC
AAACAGACTCTCAGGGCCCAGGCCTCTGGTGTCTGAGGCACAGTTTCACAGTGGCTTTCC
ATCCTCTCCTTTCTTTCAGGCAAAGAAAGTGCTGCCTCCGAGGGGCACTAGGCGAGCTGC
CACACCTACCCAGATGTATGTGCGCCATGGGCACACTCTGGCATCCCACCTTGGCATTGG
AATCCTGGAAATTCAACAGGGAGGTAGTGGCAGTGACTGAGACACCAGGAAGGCAGCCAC
GGCCTGAGTTCTGGGCTGGACAGCCTTGGGCAAAGCACTTGTCTGCAATAGTCCAGTCTT
CTGCCAGAATGGGCCTTGGGGGTCGGGGCTGAGCTGCTGGCTGTCTTGGCCTCCAGCTCA
CAGTCTCTGGGCTTATCTTGTCTTTGAATGTCATTGTACCCCCCACCTTCTCTTCTTCTT
GACCTTCTGCCCATTCCCTGGCTGTCTGGACCCATGTCTGTGGAGCCCTGGTCCTCACAT
AAGCTGTGCCCCTCTTCCCCAAGCTGTACTGGGAGGAAGAATGCAAACAAGGGCTGCCCT
GGCCTGCAGCTCCAGCCCTGGTGACTCTATGATCTGCTCTGGTAAAAGCCTTCTAAGCCA
TCCAGGGTGGTGATGATTTGTGACCCAC
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