SelenoDB
Release 2.0
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Transcript Report for SPT00001208_2.0
Identity
TranscriptSelenoprotein W (SelW)
SpeciesIctidomys tridecemlineatus (Squirrel)
Transcript IDSPT00001208
Transcript release2.0
External IDNone
Gene SPG00001112_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001208_2.0 # Transcript # Selenoprotein W (SelW) # Squirrel (Ictidomys tridecemlineatus) # Full length # Forward
ATGAACAACCAGGCGGGGGCCCCAGCCCCCTCCCCAACCCGGCCCTCCACCCTGGTCAGG
GCTTCGACCCGAACCCCAACCCCAACCCGAACCCCGAACCCAGTCCGGATGTCGACCCCT
GTCCAGATCCCGACTCCAGTCGGAACCCAGGCCCCGATCCGGGCCGTGATCCCAGTCCGA
ACCTCCATCCAGTCCCGGGCACCGAACCCAGTTCGGACCCAGGCTCCGGTCCGGTTCTCA
GCTCCGACCTCAGCTTCGGCCCCAGCCCCAGCCCCAGCCCGGGTCCCGACCCCAGCTCCA
GCCCCAGCCCCAACCCAGATCCCCACCCGGACTCCGGTCCCGACCCCAGTTGCAGCCCCA
GCCCCGGTCCCGACCCGGACTCCGGCCCCTAACCCAGCTGTAGCCCCAGCCCCAGCCAAG
ATCCCGACCCGGGCTCCGGTCCCGAACTCAGCCAGGGTCCCGACCCGGACTCCGGTCCCG
AACCCAGCCCCAACCCCAGCTCCAGCCCCAGCACCGTCCTGGGTCCGGGCCCCGATCCCC
GCCGCGGTTCCGGCTAAGGAATCGCCCGCGACCCCAGCCCTACATTTGGATCCGCCCGCA
GAACCTGCTCTAGAGTCTCCGGCCGAGACTCCAGCGCCCACGCCGGACCCAAAGCACTTC
CCATCCTTCAGCAGCCTCGCAGGGTCCGTCCCGGGACCCTTTCCCGCGCCCACTCCTCTG
GCCTGTAACGTACAGAGATCCACTGCGAAGGCAGACCTAGCAGCCACCCAGTCAACGGAT
CCCCCCGCTTCTGGACCCATCCCGGGGACCAGCCGGCTGTCCATCTCCATTTCTACTAAC
GCAGTCGCCTCCACCAACGAGAACTTCCAAATGGGGAACAAGATCTTGATTCGAGTGACC
TACTGGTGAGGGACGCGCCTGCCCACACCGGCCTTCCTCCCCACGCAGGGCTGGGTCGGG
GAGGCTCGGGGCTGTGGGGGTGGAGCTCCCGGGCTGGGCGAGGAGGAGGAGTCAGGTGGA
GCCCCAAAGTACCCAGACTCCCCCAACCCCGCAGTGGGCTTAGCCCCGCCCATCCTCGTG
TTTGGGGCGGGTTCAAACTCCTGCTCGGGCTCTGAGCTTCATCCGTTCATTTTTATTCAT
TCATTCATTCATTCATTCATTCGTGTGATTTCTGCCTCGTGGCTGCTTCTTGCCTCTCAT
CCTTTGTCACTCACTTCCCAGCGCTCTGCCTGCCGCGAGCCAGGCCTGCGCTGGGAAGAC
GGTGCTGAGCATCGGGACTCGTTCGGCTCCCTTAGCGCGAGGTCTGGCGGTGCAGCCCAA
AGCCAGGGTGCACGGAGATGAGCTCCCTGAGGGAGGACAAGGGGTTAGCGCACTTTAGGA
CTGCGCGCTCAGGAACACCCCTTTTCAGGAGGTGACTCTTGAGCTGACACTCCACACTTA
GGAGGAGGCGACGGCAAGTGTAGCGTGGGGGAGGGGTAGTCAAGGTCGCCGGAGCAGCCA
GTGCGAAGTCTGGAGGGGGCTGGAGGCCGTGCGGAGGCCTAAGCCTCTCTTTGAATCAAC
AATGAGAACAAAAATAACAGTAATGACTTTCCTTGACCTCCTCTGGGGCCCAGGGCTGAA
TGCAGCTCAGACAGTCTTCCGTTCTGATCCCGGTGCGGCTTCTGCCCCAGGCCTCTTTGC
ACCTTGTCTTTCCCTGTCTCTCCTCTTCTTGTCTCTGCCCCGTGTCTGTCTCTCTCCCAA
CTCGCTGTGGCTCTTTTTCCTGTGGCATGTGCCTTTCCTCTTCCCCAGTTCGACTGGTTC
CTTGTCTCCTGTGCTCTTCTCGCCCCAGCTTCTCCTCTCTACCGGTTTCTCTGACTCCAT
GGGTTCATTAATTCACTCATCCAACAACCAATTTCTTGGGTACTTACCCTGCCTCAGGCG
TGGTTTGTACCATCAGGGCTACAGGAGCCAACAAGACCAGGGTCCCTGTCTTGGTGCTGC
TGGCATGCTGGGGTGGAGAGGAGACAATAAAGCATAAATAGGACCCACAAGGGACCAGTG
CCATGGATAAAAGGCATCTTTGGTGTTGCAGTGTTGTGGTGGTGGTGGTGGTTACAAGGA
ATTGAACCCAGGGGCACTTCACCACTGAGCCACGTCCCCAGTCCTTTTTTTTTTTTTGTA
TTTTATTTAGAGACAGGGTCTCCCTGAGTTGCTTAGGGCCTCGCTAAGTTACTGAGGCTG
GCTTTGAACTTGCAATCCTCCTGCCTCAGCCTTCTGAGCTGCTGGGATTACAGGTGTGCA
TCACCATGTCTGGTTTGGGGGTTGCCGTTTTAGCTGGCGAGGTCAGGAAGGCTCACTGAG
AAGCTGATAGAGTAAAGACCTGAGGAGGGGAAGAGAAGGAGCCAGCTGGGCACTAGAGGA
GCATTCTGCAGAGAGAAGCACAGTGGGTGCCTGGTGTCAGAAGCCCAGCTAGGGGGCCTC
TGGGCAGAACAGGGTGAATAGTGTAGGACAGAGGGGGAGGAGGTGGGGCAGAGGGATGAC
AGGACAGGTCATGAGGCAACTTCTGGGCCATGGGGCAGACTGTGGTCCCTTTCCCTGAGT
GAGATGGTTCAGGGGAGGGTTCTGACAAGGGGAGGAGGTGATCTGACTCAGGCGTTTCTG
GGGAACCTTGGGAAGTACTGATGTGTGTCCCCCCCCTCTGCCTCCCTCCCACTCTCTGCC
TTCTAGTGGCCTCTGAAGCTATAGCTTTCGGGTGAGTAGTTTGGCCTTGGAGGTGGTGGG
GAAAGAGTGGGACATGAAAACCGGGAGGAGTTGGTTTCCCTTCCTGTGACCCCATAACCC
TGTGACCCTGCGATCTCATCTCCTTTCCTCAGTATATACTACTGAAGAAGAGTCTGGAGC
AGCAATTTCCAAATCTCCTGTACTTTGTAAGCGGGTTGATGGCTGGGGAGTGGGGACGTC
AGCGCTTCCGACCCTCCAGGGCTTGGAGGGGAGCGCTCAGCCTCTCCCCATCCCAACATT
CCTTCCCAGGACGAGGGGGTAGCCCAGGCCACAGGGGAGTTTGAAGTGTTTGTGGAAGGG
AAACTGGTCCATTCCAAGAAGGTGATTCTGAACAAGGGGCCTGCACAGGGAAGGAGGGTG
GGGCTGGGGGCCTGGGGGAGGGAGACATATCTGAGTCTTTCCCTTCCGTGCCCAGAATGG
TGATGGCTTTGTGGATGATACCAGCCTTCAGAAAATTGTGAACGCTATAGATGAGGAGAT
CAGGAAAAGGTAGCAGGCAATGGTGGAGCTGGAGGTGAGTGAGATCCTGCAGAGGAGTTG
GAGGGCTGGGTTTGGGGTGGCAGGTGAGCAGGACAGGGCCCCATCTAGGGTTCTAGCTCA
GCTGGTCTGACTCAGCTGGTCCTCACTGCTGTAGTTACCTAAACTCTCCTCTGAGCCTCA
GTTTTCTCATCTATAAAATGGCTCTGTTGAGGTGATTTCAAGAGATGCCTCCCATCAGGT
AGCAAATAGTACTTGTTCCAAGTAGGGCTCAGTGGATGTCAAATATACTTCCCCCCCAAA
CAAAGAGCCTGCTTTTGTTGTTGTTGTTGTTGTTAGCTTTTAGTTGTAAAGCTGTGCTAT
CCAATAACAGCATCACTTGTAAATTTAAATTATTTAGAATTAACTACATTACAGATTCAG
TTCCTGAGTTGTACTAGCTACATTTCAAGTGCTCAGCAGGCACATGTGTGGCTAGTTTAT
TGGGTTGGATTACAGGTACAGAACACAGAACTCATCCTGGCAGAAAGTTCTAATGGAAAC
ATTGTTCTAATATATTAGTATAATGCACCATAATTTATTGGCCACCAATATTTGATTTTT
CTGGGGGGGGGCACTGGGGATTGAACCCAGGAGCACTTTCCCACTGAGCTAAATCCCCAG
CCCTTTTCATTTTTATTTTTTTTGAAACAGGGTCTTGTAAGTTACTGACAGCTTTGTTAA
ATTGCTGAGTCAGGCCTTGAACTTGTGAGTCTCCTGAGTTTCTGGGATTGTAAGCTTGCA
CCACCGTGCCCTGCTCCAATATTGGATTTTAATTTTATCTATGTATTTTTATGATACTGA
GGATTGAGCCTAGGGCCTCACACAAGATAGGCAAGCACTCTACCACTGAGCTACATCCCC
AGCCCCCAATACGGGATTAAAAAAAAATCTTGTGTTTTTTAATTTAATTACTTTTTGTTG
TTATTGCTGAGCTGGGGATGGAACCCAGGGCCCTGTGCACACTAGGCAAGTGCTGTGCCA
TGGGACTACATCTCCACCCCCACAAGACTGGAAAATAAATAAATAATTATAAATATATAT
ATATATATATTTTAGTTGCAGATAGACCTTTATTTTATTTATTTTTTTATATGTGGTGCT
GAGAATCTAACCAGGGCCTCACACATGCTAGGCAAGCACTCCACCACTGAGCTACAACTC
CAGCCCACAAAACTGGATTTTTAAAGGCACTTATTAGGGCTGGGGCTAAGGCTCTGTGGT
AGAGCACTTGCTGTGCTAGGCCCTGGGTTTGGTTTTCAGCACCACATTAAAAAAAAAAAA
AGTCTATTGACAACTAAAAAATTAAAAATAAAAAAATAAAGGCACTTATTATATACACCT
TTGCAAGCTGCTACTGATTTGGTAGTTTGTCGTGCATGGACACAACGTATTGCTTACTTT
CAACTTTACTGAGGTGTAAGCAATGAAGAAAACTAGTGTTTCAAGTGTACAAGTGTGAAG
CCACCAAGAAATCAAAATAATAAACATATTTCAACTCCCACAAAAGTTTCCTCAGAAACT
TCTGTCATTTTCCCCACCTTCTACCCCCATCCCAGGCCCCTAATTTGGCTTTCTGTCCCC
ATGGATTGGTTTGAATTTCTCTAGAGTTTTCTATAAATGCAGGCTGTACTTTAAAAATAT
ATGTATATACTGGGGGCTGGGGATACAGCTCAGTTGGTGCACAAGCACAAGGCCCTGGGT
TCAATTCCCAGCACGACAGAAAAAAAAAAAATTGGGTGAAAGTTTGACACACACCAAGAG
AATCGTATAGTGAACTTACTGTACCCATCTCCCAAGTAACTGTTACTTTCTCTTGTCCAT
TTTATCAGTCTTCCCCTCCTCTTTTTTTTTCACTATAGTATTTTAAAGTATATTCCAGAC
CTCATGTTATTTCTGCTCTAAATTCTTCCACCTGCATCTTTAATAGGTAAGGTTTAAAGA
TGGAAATACAAGGCCATGATTACACCCAGAGAAAAGAAAAATAAATGTCTTAATGCCATC
TAATATCTACTCAAGTGTCTCAAAAAGATCTTTTCACAGTGGTTTATGGACTCAGGACAA
AGAAAAGATCTACATATTCTAATGGCTATTATAAATATTTAGTTGTAGGTGGACACACAA
TATCTTTATTTCATTTTTATGTGGTGCTGAGGATTGAACTCAGTGCCTCACGTGTGCTAG
AAAAGCACTCTACCACTGAGCCACAATTCCAGCCCCTAATTGCTATTTTTTAAAAGAACA
TTTTTAGTTGTAGATGGACACCTCTATTTATTTATTTATTTTTATGTAGTGCTGAGGATT
GAACCTAGGGCCTCACACTTGCCAGGCAAGCACTTTACCACTGAGCTACAGCCCCAGACC
CATAATGGCTATTTTTAAACAATTATAAACAGGCTTTAAAAAGTTTCTACTATGTGCAGG
GCTCTTGGTAGGTTCTTCTTTTGTGTGGGAGTGCGGAGGTACTGAGGATTGAACCCAGGG
GCACTCAACCACTGAGCCACATCCCCAGTCCTTTTATGTAGTTTATTTACAGCAGGGTCT
CACAAAAGAGTTGCTTAGCGCCTCTCTTTTGCTGAGGCTTTGAAATTGCAATCCTCCTGC
CTCAGCCTCCAGAGCCTCTGGGGTTACAGGCCTGTGTCACCTCCCCGGCTTGGTAGGTTC
TTGTTCTTTTTTTTTTTCCTGCCATATGGGGCGCGGGGAGGCAGGGGAGAGGTCTGTTTC
TCACACCTACCAATATGATGCAGAATGTGGTGGTGATTATACATGCAGTTTCCAAGGTCA
CAGAGATTTAGGCTCAAATCCTGGGTCCACCAGCCACACCAGGCTGAAATTGGGTGAAGG
ATTTACCGAAGACCTCCTTCCATAAGTGACAGCTTCTGTTGTTGTTAGATCAGAACTGTT
CTGATTGCAAGAGAAAACCCATCTTGAGCTGCCTGTAGGGGAAGCAAAAACATTGGCAAT
AGGAATAAAGGGTCAGGGTATAATTTTGTTGCACAGAGTGGGATCCAGGTACCCAAAGAT
CACCCCTGGGAACCTGACTCCTCCTGACTCTGGCTTCTGCATTTTTCTTTTAAACCAGGC
TGTCTTTATTTTCAGGCAGGTTCCATTTCCTGGTGGCTTAAATCCTACAAAGCTTCCCAT
TGGGCTGGTTTAGGTCACAAGTCCATCCCTGAGCCAATGGGAGGGGGCTCAGGGGTGCTC
TCTTGAGTCAAGTTCTCATTTTTGGAACTGGAGTGGAGCTGGTGCTGGGGTTTGAACCCA
GGGCCTAGTGCATGCGAGGCAAGGACTCTACCAACTGAGCTATATCCCCTGCCCTCCCCT
CTCTTTCAGCTTCCTTCTCTGTAAAACAGAAATTCCAATAGTCTTTCCCTGATTGGATTT
ATTTCTGCTCACCCAGTATTTGCTGTGTACCTTTGATGTGCTGCACACTGTCCTAGGCTC
TGGAGATAAAGCAGTGAACAAAACAGATACCAATCCCCACGCTAGTGGGGAAGACAGCTA
CTGGAAAGGATGCAGAGGAGAATAGTGGGCATTTTATTTTTAATTTTTCCCATTTTTTAT
GGTCATAGTTGTACTCAGTGGTGGGATCCATTGTTATATATTCACAGCTGCACAGAATAA
CGATATAATCTGGCCAGTATCATTCCCTAGTAAGTTCCCGTTTCCATACCCCTTCTCTTC
TTCTTACAAGACTCATTAAGAAGGTATCTGGACCATGTGGGCATCTCAGGAAATGTATTG
TAGGCAGTGGGAACAGCAAGTACAAAGGTCCTGTGATAGGAGTGTGCTTGATGAGCTTGA
AAAATAGCAGGACTAGAGTGGACACTGGAATACATGGAAAGCACTTTCCACACGAAGCCC
TATATAATCACCATAATTTTAATGGAGTTATACGTTCCTGTTTTCAGTTTTTTCCTCTCT
TCTTCTCAGGAGCCTCAGCAGGATGATGAGAAGGGCTGAAATGTTGTCAAGTCGGGTCCT
GCTCTGATGGTGGCTGGGGTGG
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