SelenoDB
Release 2.0
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Transcript Report for SPT00001742_2.0
Identity
TranscriptSelenocysteine synthase (SecS)
SpeciesOchotona princeps (Pika)
Transcript IDSPT00001742
Transcript release2.0
External IDNone
Gene SPG00001647_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001742_2.0 # Transcript # Selenocysteine synthase (SecS) # Pika (Ochotona princeps) # Full length # Forward
CAGGAAATGTTTTCTTATTTGTCCAGCCAACTAGAGAAACTGTCAGAAGCCTACAATGAG
AGACTGTTACATACGCCTCACAATCCCATATCTTTAGGTAATTTTAAAACTTTAGTACTT
CTGATTCATCCCTAGGAATAAGATGGTGTTTGTAGAAAAAGAGAACACTTTCTGATTATA
CTGTTTTTTTCTGAATTCATTACGGTATTAATTTGGAAATTGAAAAAGTTTGTTTAACCG
TTAGAAATGCTTACATGTATTCCTAAGATAAAAGCTATATGCTGAAAGAATCAAATCAAC
ATTAAATATTATAATGAATACATGGAAAACAGTAATTTAAGTCTTGCTTCTAGCCAGAAT
GTTAGTCACTAGTACAAAACTCTATATAAATAATTAAAACTTTTCTCCAGTTAATAAACC
TCTCCCTAAAACTTTTTAGATGGTGGTATTATTTCCTTTAGCTGCTGCATATTAGAGAAA
TCTGTAATTGTGATAATTTCATTTGTTTATGGACAGACTGTTTTTTTTGTCATGTAGTAT
AAGACTAATAAAAATGATGGAAACATTAATTTTTGTGCATTTAGCTTTTAATAAAGCTTT
ATAATAATGTCTTTTAATTTGTAGATATCTGTAGAATAAGTTTCATGTTTCACTTCTGAG
GAGAAAGTAAACAGAGCGAATGATTTGTGAATGAAGCCCTTTTCAGGAATGGGCTTCTAT
GAAAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGAGCCTGTTAGGTGCTGAGCTGTGCCTAGCATGGATCAGGCACAGAAAACA
CCTGTTTATATACATGTACAGAGACCCACTTCATTACCTCTCTGTCTAGGTTTGTCTTTA
TTTCCTTTCTTAGATAATTCTTCAGTAGTTCAGATTATCATATTAGATATAAAATGTTTA
ATACTAAATTCAAGTGAAAATTGAAGGAAAAGTGTATTTCCTAAACTAAAAATGCTGTGT
GATTCTTGCCCAAATACTGCTTTAGAAAAAGGGGGCAAATGTACTTTCCCCTATTATATA
CATGTGGCCTGAAAATGAAACTATTTTTTGTTATATCTATGAGGAGGTCAGAGAAAAATA
GCTTGAAAAAAAATATCTTGCTGTGATAATTTTCTTTACATGCTTCTGTTTAAAAAGTTC
ATTCTGAATCCCAGAGGGCAGAGATTTCACATCAAAGGATGGCTGTCAGAAAGGAAAATC
TGAGATTAATTCAGCTTGTACCTTGATGAATGCTGTCCGCGCATGGCCCAGTGTTGACAC
ATCTAAAGTGGTTTTCTTGATCTTGTTGTGCTATTGCCACTCTCTGTCTTGTTTATGGGA
TGCTAACTGACATTAACAAAAAGAAGAGAAAGATTAAAAACCTTCTGGTATCTAAGAATG
CTAGTGAAGTCAAGCTTGAAAAATGCACATGCCATTGTTGACTGGCCTTTACCCGACTGT
GGGCAGTTACGTAATTTCTGCTGAATCTTTGCTTTTAGTCCTTCTATTTCATAGCATTGC
TCATTCGCACAGTTGGGATTTTAGTTTGTTGAATATTCGAAAGGCTCGACTTGCAGCAGT
GAAGCAAGGGACTTTGGCTTATAGGTTTTAGTGTCAGTAAAGTATGGATATATGAAGTCT
AAGTCAAGATCTGCTCAAAGCAAATTTGAATTTGTATTTATCCCTCTGAAGAAGATGCGA
AGGTGTTTGGGATTCCTAGAGCTTACAGCTCTTCCATTGAAGATAAGTAAATGGTTCAGT
CAGGACTACCGCATGCCAAGTAGCAGTGTTTTACATAAATTCACTCAAAGGCTGACCAGT
CTCTTTGTAGAAGCCTGTAGTTCATGACTGTTTCTGAAGTTTTGTAATGAGTAGATATTA
CACATATCGTATAACACAGATACCTTTGTTTATGAGAGACATTATGTTGATATTAATGGA
TACTTGGGTAAATCTTTTCCCTTTCAGGGTTGTGCCTCTTGGATCTGTGAAAACTGTGAG
TGGCTATACTTTCAGAGGCTTTATGTCCCACACCAATAATTACCCTTGTGCTTACCTCAA
TGCGGCATCAGCCATTGGAATGACGACACAAGATGTGGATTTATTCATCAAGAGACTGGA
CAAGTGTTTAAAGACGCTAAGGAAAGAACAGAGTCAAGAGGCTGATGGACCTGGAGTTGA
CAGTTGTGACAAAACTGAAGATGCAGATATTGAAATGATTTTTAAACTAGAAAATGCT
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