SelenoDB
Release 2.0
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Transcript Report for SPT00001777_2.0
Identity
TranscriptSelenoprotein U (SelU)
SpeciesOchotona princeps (Pika)
Transcript IDSPT00001777
Transcript release2.0
External IDNone
Gene SPG00001682_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001777_2.0 # Transcript # Selenoprotein U (SelU) # Pika (Ochotona princeps) # Full length # Forward
AGAATGTCTTTCCTCCCGGAGCTGGGCTTCTTCACCATGGGGATGTGGTCCATTGGTGCA
GGAGCCCTGGGGGCTGCGGCTGTGGCACTGCTGCTGGCCAACACAGATGTGTTCTGGTCC
AAGTCCCAGAAGGCCTCCCTGGAGTACCTGGAAGATGCAGACCTGAAAACCATACTGAAG
GGTAAGGGCCACCGGGCCAGTCCCAGTACTTTTCCAAGACCCTGGCAGGCAGACTTGCCA
AGCTTCTTTTTTTTTCTTCTTCCTCTTTTGTTTTCTGTTTGTTTCTTTCTTTTAATTGAA
AAGGGGATGTAACCAAATTAGGACCAATTTAATAAGGCTTTTTAAATGACTGATAATCTA
TTACCCTAACACAAAGCTCTTGCTTTCTTTTGATGTTTCCTTTCTGTGTTCACCTGATAG
GGTTGTAGTCCTGGTGTGTTCTTTTACTTTTCCTGATCGAAAACATTCACGTTCTGTCTT
GGTCTAACTAGGGTCTAACATTACTGCCTGTGAGTTAGCAGTCTTGCACCATTGTTTACT
AAAACAGTTCTTCCAGACTGTCCTGAGGAATTCGGGTCCTTGGGGAATCGTCATACAAAT
GAGAGTGCTTGGGTCAAATAAGGATGAGAAACAATTTGTCCTTGGTGTTCCTGGCACACT
GCAGGGACTTACTGAAAGAGGGTCTGGATGGCTCCTGACATTGGCACAGCCAGCTCCTGG
CTGTACCCAAGCAACAGTACCTGGGGAAGCTCTGCGTAAGGTCTCTTTAGAACAGACCTG
CCCATCTGCCTTGTCTTGGGGGCCCACCCAAGCACATGGCTGACCACTGACCGCTGATGC
TGACAGTCACACAGTCCAACAGGGTAGCTCTGCCTCCTCGCCAAGTGCTCTCAGCTCCAG
AGCCCCACAGTGCTGACCTGGAGCAGGAGAGCTTGATGAATGTTCTGACTCACAGATTGC
TGGTCTCCAGGTTAGCTCCTGGAGGGAAGGGATCATCGTCTTCTCAGAAAGGAAGCATGT
CCAAGGCAGGGGGCAATGTGATGGCAGAGATACGTGGTAGGTCACCTTGGTAGAGAACTA
AGAAGTCCTTTCAGACCTCTTTAGCTCTGTAACCAGAGTGTTCCAGTCTCTCACTAGATT
AAACACAATGTCAGCACCAGTACCATGGCATACTAGTCACTGGTATTTCATATGGGCACC
AGTTCATGTCCCAGCTGTTCCACTTCTGATCTATCTCCTAACTAATGGCATGGAAAAGCA
GCTGAAGATGGCCCAAATCTTTAGACCCCTGCACCCACTTGAGACACCAGTAAGAAGCTC
CAGGCCACTTGGGGAATGCACCAACAAACAGAACATCTTTCTGTCTGTCTTCCTCTTTTC
TCTCTGTAACTCTGCCTTTCAAGTTAAAAGAACTTTTAAAAACAACAGCAACAACAAAAT
TGCGGGGAGCTGGCATCGTGGTCTGTAGCATGCTAATGCTCTGTCTGCAGCACCAACATC
TAGATGGCTGCCAGTTTATGTCCCAACTGCTCCACTTCCCATCCAGCTCCCTGCTTGTGA
CCTAGGAAAGCAGTCCTTGGCCCCTGCACCTGTGTGGAAGACCCCGAGAAAGCTGGTTCC
TGGCTTCTGCTTGGCTCAGCTCTGGCTGCTGGAGCCATCTGGGGAGTGAACAAGCAGATG
GAGGATTTTTTTTTTCTATTTCTGTCTTTCCTTCTCTCGGTATCTCTGCCTTTCAGATGA
AAATTAATAAACTTAAAAAAAGAAGACAATCTTCCTCCTGCTCCCCCAACCCCATCCACA
CTCAGCATCCCGCAGAGGCATGGATTCCTTTGGGAAATCCTAAAAGAATAAGAGTTCTCA
TACCAGACACTGCAGTCAGCTGTTTGGTATCCATTGCTTCATGCTCCCTACAGTTCACAG
TGGAGCTACTGGATGCCCACGTGTTACCCATGTGGAAGCTGGGGTCCACTGAGGGAGAGT
GACTTGCTCAGGATCATCCAGCTGGATTTGGGAATCAGCCAGAGCTTTACCACCAGGCTT
GGACTTCAATACCATCTCATCCTGGAGTGCTTTCTTGTTAGACATCATCTTCTCTCCTTA
ACATGACATTGTGTGTTTCCTTGCTTCCTTCAATTCCTCTGAGTGTGTTTTTAGGAGTGA
GTTTGCTTCGATCACAGTGCAGACTTTTTCACTTGTGGCTGTGTGTCTGCCTTAAAGGAT
GATTACAATGTTCAAGAACAAGAAGTAAAACCTTTCCCCCCCAAAAAAAAAATCTCTGTT
TGGAACACTTGTTTTAATGGAGGAAGAAAGAGTAGGATTCTAAGATCAGTATTTTTTATC
TGTTTCTTGGGTTCCTTTTCCCCTGTGTGAAACGCCCATCCAGGTCCTCTGTGAGGTCTG
AGGCTTCTAAACTTGGTGTGGCTCAGTGGAGTTTGTGACCACCTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGAGAAGAGTTCCTGACGAGTGGCGGCCA
GTGCCTTTTGAGGCCAGGACCCAAGAGCTGCAGGCCAGCCCTCCCCTTGATCAGCACTGA
CCTGTGTCCTACTACCGGCCCTAGGAATTTCTGTCAACTCACACTCTGTCTGGTTTTGAC
TACTTAGCATCTCCACTGGGATTAGTAACACATCTGACTTGCCTTTGGAGCACCGCCCAC
CAAGGCTTTCATCCCCATGTAGTACCATCTGGATTCTGGGCTCACTGACTGGTTCCCACA
CAGAAGCTGATTAGTCAGTGAGGAAACATCAAGGGAAGGCAGGAGTGTGATTGCAAGGGA
TGGGGGAGAGGCCGAGAAAAGGAGATCTTCTATCAGCTGGTTCACACATCCAAATGGCCA
CAGTCGCCACAGCTGGGCCAGGTCAAAGTCAGGAACCAGGAATTTCCTCCAGTTGTCCCA
CATGGGTGGCAGGAACTCAAATACTTGAGCCATCCTCTGCAGCCTTCCCAGTTGCGGCAG
GAAAGTGGATTGGAAGTGGACTAGCCGGGCACTGGGTTGGGTCCCGGTTGCTTCACTTCC
CATCTGGCTCCCTGCTTGTGGCCTGGGGAAGCAATAGAGGATGGCCCAAAGCCTTGGGAC
CCTGCACCTGCGTGGGAGACCTGAAAAAAGTCCCTGGTTTCAGTTCAGCTCAGCTCCGAC
TGCTGTGATCATCTGGGAGTAAACCAGAGGATGGGAGATCTTTGTCTCTCCTTCTGTCTG
TAAATCTGCCTTTCCAATACAAAATTATTAAGAGAAAAGGAAGTAGCTAGGATTGAAGCC
AGTGCTCTGATACGGAATATGGGTATCCCAAGCAGTATGTCAATCTACAGTGCTATAACA
CATGCCTATGCTGGCTCTATTTCTTGATTTTATTATTTATGTGAGGGATAAAGAGACAGG
GAAAGTTTCCATCTACTGGCTCATCCATAGTTGGCCACAATGACTGACGTGGGGCCAAAG
CCTAAGCTAGGAGCCAGAAAAACATTCCAGGTCTCTTGTGTGAGTGGCAGAGGGCCAGTG
ACCTGAGCCATCACCTTTGTTTCCCAGGACCTATTTTAGGAAGAAGTTAGAATCGATAGC
CAGCGGTGGGAATCAAACCCATATACTCAGTGGGAGATGTGGACATCTGCACTGGCTTCT
TAACTGCTGGGCTGGGTACCTGCCCTGGGAGTGTGATGGTGAGAGCACAAAATGCTAATG
TCAGGGGATACTGCAGTTACTGTACCCAGCTTGCTCCCTTTCTAATGGGTAAACCAACAA
CAATTGTGGTCTGGTGGCCTGTCCATTTGGTAGCACAAAGCCTGTGTTTTGAGATTGCTG
TTTTGCTTAGGAGAAAACCCAAAATGACTGTTGTATTGCTTTTTATGTAGTGATGTTGGC
CCTGTGCAGGATGTCATTTTCATCCTGCTGGATACCCTCCCCGACCCCAAGGCATTGCTC
CTGAGTCTTACTATTATTATGGAATATATGCAAAGCCCCCCCACATTACCTTTATGACAT
TTTCATGCATATTATGTCATGAGGTCCTTACCATGCCCCCTGGAAAAACAGCTGTTTGTC
CTTACTCTCTTTTCCAGGCAAAGATACTAAAGTGCAGAGGTTAAGATGATTATTTCATGG
CCTGCCGTAACAGATTGCCACAAACCTGGTGGTGTTGGACAGCATCCATTTATCTTGCAG
CTGTTAGGGTATGGGATGTTGTCTCACCCCTCCAGCAGGCCATAGAGGAAAACCCATTTG
TGAATCTTTTCCCCAGTTTTTGGAGGCCACCAACACTCCTTGGCTCATGGCCCCTGTTAT
TTTGGAAGTCAGCCCTGCCTGTTCGGATCTTTGTCCTGCCACATCACTCCAATGTAAACT
TTTTTCCTTCTTGTTTGGTGGGTGCATAAGGAGCCTGGTGACTGTAGTGAACCCTCTGAG
CTGATTTAGATAAATCTCTTTATTGGAAGATCAGTGAGTGAGCAATCATAACTTTGTCTC
AGCCTTAACTCCTGAATGTCACAGAACCTACTCACAAAGTTTCTAGGGATTAAGCTATGG
ATATTGAGAGAGGCTGCCATGAAGGTGGTGTCTGAACTAGGGGTTCTTGGTTGTGAATCT
ATGGTACCTGCAGATGTCAAAATGGAATGCTGTTTGACTTGATTGCTTGGAGCCATTGCA
ACCCGTAAAGTTCCAAGAGTAACATCTCCTTCCTAATGATAGCATGCTTTCCTGTACCTT
GGGCTGTGCCCTGGCAGAGCATTTTTTAGAAACCTAGATGAATGGCAATGAGAGTTATTT
GGAGTGACTCCAGGAGGAGTTGCATGACTTATTTTACACGTCTGGCTTGGACAGGAACCT
ACTCAGCGTAAGGAGCCTAGGAGAAGTGAGTCACGAAACCTGTTCTCTTCAAGCAGGTGG
CCTGTGCCCACAAGACGCTGCAGTCCTCTTTGCCCTGGGCCAATTTTGCTTTTACAGGAG
CTGTTGATGAATGCATTTTAATCAATTCTGTTGTGTCAGCTATTATTCTTTCCCAGTGTG
GAAAATTAAACGTAGCTGCCATTGGATAGCAGCATATTTGTGTTGAAGACAGTGGGTCGT
GTTTAAAAGGGTTTCCTTCCCACTGTGGGAATCCTGGGCTGAGCAGGGGGACCTGATGCC
CTGTTCTGAGACCCAGTGCTGGAGGTGCTGGACCACTCAGGCTTGAGTTGTCTCTGGTGA
TTGTGTTACTGCTGCTCCTCTCTGTTCTGTTCCAGCTGTGTGGGGGAAGGTGAGTTGTTG
GCCACCAAGATCCAGAAGTTCCCATCCCTGAAATCTACCCCTGCCCTACCTTCCTGTAGG
AGGCTGCAGACCTATCTTCCCTGAAGCCCAGGTTGGATGAGTTGGGCGTGCCCCTGTACG
CGGTGGTGAAGGAGAATATCAAGAGTGAGGTGAAGGACTTCCAGCCTTACTTCAAAGGAG
ATGTCTTCCTGGATGAAAAGGTACATGTGCCGTGAGTGCCTAGGCCCCAGCGTGGGAGGG
ACTGTGGCCAGCTCTGGAGGGCTCTGTGGCTAGGGGTGTGGCTGGGCCTGAGGCTGAAGA
CTGCTGTCTCCTGCCGTGGCCTTGAATTTCCATGGGCTTTCCCAGCCCTCTGAGCAGAAT
ATGATGAGACACATGATGAGAAGGTCCCGGACCGGTTCCATCGCGGAATTCCGTGGAGTG
GAGGGCAGGAAAATGCGGCCTTCCCCGAAGTTTCTGTCCCACCCCCAGTATACATATAGG
GGACCCTGGCAGGAATCCACCGCATCCCTTATTTCATTGCTGCTGTGTTGCTTCCCCTTC
CACTCTGTGTCTGCGATGGGCAGTACTATTCCCACTCTGCCACGCTCAAGAACAAGGGAG
AACTTGAATCAGAGTGCAAGTTGCAAATCGGCTTCCCTAAGTTGGGTCTGCCTTGAGGGG
CAGAAGCTGGACCTGGCCAGGAGGGTGCTATGTATCCTCCTTGGGCAGTTGTGAGTGGTC
CCGAGGGGCAGCTGTGTGTGTGCTGAGTTGGAGAGAGGACACCAGGCACCAAGCTAGAAC
AAAGGCTATGCTGGGACCTCTTTGGGAAAGGCAGGCACAGGTCCTCACATGGAGTCTGTC
TTCCTCACTGCATAGAAAAGGTTCTATGATCCACAAAAGCGGAAGATGATGTTTATGGGG
TTTTTGCGTCTGGGAGTGTGGCATAACCTCTTCCGGGCTTGGAATAGAGGCTTCTCTGGA
AATCTGGAAGGTGAAGGCTTCATCCTTGGAGGAGTCTTTGTGATTGGATCGGGAAAGCAG
GTGAGTTCTGGCTTTTTGGAAAAAATTATCTATCTGCTGCTAGTACAATGGCTCCATTGG
CAAATACTCCACCTGCAAGCAATGGTAGTTTGTGTCCTGGCTACTCCACTTCACATCCAA
CTCCCTGCTTGTGACCTGGGAAAGCAATGGAGAATGGTTCAAAGCGTTGAGACCCAGCCA
CCCACGTGGGAGACCCAGAAGAAGCTCCTAGCTGCTTGCTTTGGATCAGCTTAGCTCCAG
CTATTGTGGCTGTTTGGGGAGTAAACCAGCAGACAGAAGATCTTTCTGTCTTTCCTGCTC
TCTGTTTATCTGCCTTACCAATAAAAACAAATAAATTTTAAAAAATATATCTATCTGAAA
GGCATGGAGACTAAGATCTTCCCTCTGTTGATCTCACTCCCCTGAGGCCCCGTAACAGCA
AGGACAGCATCCAGCCCATTCCAGGACCAGGAACTCCATCTAGGCCTCCCATGGGTGACA
CTGACCAAAGTAGTTAGGTCATTTCCCACTGCTTGTCCAAGGACGTTAGGGAATTGGATC
AGAAGTGGCATAGTGGGGACTTACGTGGCATGCACACATGGGATATTGATGGACAAACAG
TAGCTTGGACATGCTGCACCACACTGCTGGTTTCTGTGGTCTTAGTGTTCACTAAGTTTG
AGACCCCGATATGGATATTAGAATAAAAAACCCTGACTCCCCAGACATGGCTGAGAAAGA
CAGACCATGTCTATGGGCACTTGGAACAAACCAAGTGTACCTAGGAACCACTGTCACTGA
GACAGTCTAAGATTTTGTCTAGAAAATCAGCTGTTTTAGTATAAGGCACCAATGACAGTA
AGTATTAATACAGATCAGGAAGTATAGTGAATACAGTGTCAAAGGAAGACATCAGAAATA
ATGACCCAAGCCCTCCCTCCTCTTCCTCACATTCCCTGGATGCTTGGCAGAAACACTGGG
ACTCCCCAAGTAGGGAAAGTCAATCCCTGGCCCCGGGTTGCAGCCTCCTGTAATAAACCA
GCCAGAGACACACTGCTAAGGCATGAAGCAATGGCAGTGAACATGAGCAACCGCTCCCTG
GTGCTGCCCAGAGCCTCTCTTCAGAGGGGATTCCCAGCACCCCTTTCCAGAAGCTCTTAG
ACCTGGGAGGGCGCCTGCTCTGGAGGACTGCCCATCTACCTCCTACTCTGGGATGTGAGG
TTTTTTTCCCTCTTGTGCCACCGCTTTCCTGTGGCCTCTAGGGCAGGGCCTGGCACACCT
GCCAGCCTCCTCTTGCCTGGCGATGCTGACTCACCCGATGTTCATGGGCTTGGCTGGCAC
GGACCTAGTGTTGCTAGGTTGTTGTTTGGCTTTATCAGTATCCCCCGGGGCCCTGGCCTT
TTCCCTCCTTGGTGGAAGGTTGACTGGGCTGGCTTGTCAGGACTTAACTCTTCCTGGGAG
CAGTGTTTTCACAACCCCACTGTGCCAGGTGCCATTCAGTAGTGATTTTCTTTGTAACAA
TGTATTTTTTTAAGATTTTATTTTTCTATTTGAAAAACAGTTACAGACAGGCAGAGACAG
GTCTTACACCTGCTGATTCACTTCCCCATTTGACTGCAACAGCCAGAGCTGAGCTGATTC
AAAGACAAGAGCTTCTTCTGGGCCTATTTCAAGTGGGTGCAGGGGTCCAAGGACTTGAGC
CATCTTCCGCTGCTTTCCCAGGCCACAGGCATGGAGCTAGACTAGAAGTAGAGCAGCCAG
GACATGAACTGGTGGCCATGTACAATGCTGACGCTGCAGGTGAAAGCTTAGGCTACTATG
CCATGGCACTAGCTCTTGTAATAATATTTTAAAAAGCATTCTTAATTTAAAGAAGTATGT
GTGCACTACAGAAAATTTGAGGACAGTGGGCAATAGGAAGTGAGGAGAGCATTCTTTTTT
TTAAAAAGATTTATTTATTTTTATTACAAAGTCAGAGATACAGTGAGGAGAGACAGAGAG
GAAGATCTTCCATCCGATGATTCACTACCCAAGTGAGTCGCAAGTGCCGGTGCTGCGCCG
ATCTGAAGCCGGGAACCTGGAACCTCTTCCGGGTCTCCCACACGGGTGCAGGGTCCCAAA
GCTTTGGGGCGTCCTCAACTGCCTTCCCAGGCCACAAGCAGGGAGCTGGATGGGAAGTGG
AGCTGCCGGAATTAGAAACGGCACCCATATGGGATCCTGGTGCGTTCAAGGCGAGGGCTT
TAGCCACTAGGCCACGTTGCCGGGCCCAAGGAGAGCATTCTTTATGGACAACCTAAAGGA
GCAGCTCTGAGGCCTTCTGTTAGAAAGTGGTATCTTGCAAAGCTAGTTTTGTTTGTTTGT
TTGTTTTTTGTTTTTTCCATTCTGAACTGTATCGTGGGCATTTTCTCATATTATCATATA
TTCCTTAATGTTTTTATTCCACATTATGTTTTATTGATATCTTCCCCGTAGTTACCACGC
CATGGTGGGGACTTTTTATTTCTTTATTTATTTTAGGCAATGACACAGTATATTTAGATT
TTTCTTTTTGAGTTCCTGGAGGTCATGGTCCAAGAAGTCTTTGCTCGGATTCCTTGAGGC
CAAGCTCTCGTGCAGTATTTTTTCATTTTTACCACTTTAGTGGAATGTAGGAGTAGCCTG
CATCGCAGTGCAGAACTGAGTGGCCTGTGGTTTCTCAGGAAGACAAGGAAAGGCCTCTCT
TTTCAAAAGGGTGTCTGGGACCTGACGCCTGAGCTGCCCTTGCATGTCCTCAGACTTTTT
GTGTGCCCTTCCTTCTAAAGTATTCATCCACCTGCAGCTTCACCTTTGTAAACCTCATGG
TTGTCCTTCCTGCTTTATCAGCTGTGAAGCCTGCCTTTAAATGTCCTTGTCAGTTACTCA
TATCTGACTTGCTGCTCAGCAATGCTGTATGCTCAGCCCTGACATTGTTCCTGTGTGCAG
CCTTGATACTGTATCCTGTGCGCAGCCCTGACACTGTGCTCTATGCACAGCCCAGATACT
GTGTCTTGGTCTTTCCTGGACCTCCTTTCCCCCAAAGCTGAATACTGTGGGTAGGAGGCA
AGCCAGATGCAGACCTGTGGTGTCTGCTGCCCATGGCTTGATGGCGTCTGTGCCTAGAGG
GGGCATCAGAGAGCCAGGAGGACTGACACTCTTCCTTGTTTCCTTGCAGGGCATTCTCCT
GGAGCACAAAGAGAAGGAATTTGGAGACAAAGTAAACCTATCTTCTGTGCTGGAAGCAGC
CAGGAAGATCAGATCACAGGCTTCCGCCTCAGAGAACAAG
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