SelenoDB
Release 2.0
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Transcript Report for SPT00001780_2.0
Identity
TranscriptSelenoprotein W (SelW)
SpeciesOchotona princeps (Pika)
Transcript IDSPT00001780
Transcript release2.0
External IDNone
Gene SPG00001685_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001780_2.0 # Transcript # Selenoprotein W (SelW) # Pika (Ochotona princeps) # Full length # Forward
CTGCGATCCCCGGCCATGGCCCTCTCCGTGAGAGTCGTGTATTGGTAAGCACGGGCGCCC
TGCGCGCCGACGGAGCCGGGGGTCTGGTGGCCAGGTGGGACGCACGCACAGGGAACGGGT
CCTCCCTGGCCGCCGGGCCCGGGGCCGTCCACACAGGCGGCTGTCGGGAGCCTCAGCCTG
GAGCAGGAGGGGGAACCTCGGCCCCTTTTCGCCCTCGTTTCCCCTTCCGCCAGTGTATAC
GCTGAGCAGCCACTGGGTGGGGCGCCTGGAGTCGCTCATGTTCCAGAAAGTTCCTGCGTT
TGGCAGAGCTTTGAATGGGGGCCTTGCAAGCCTGAGGGGTGTGATGGAGGCCCGTGGCCG
CTAGCCCCACGCCTCTCCTGGTCTCAGTTTCCTCGTATGGAGTAAGGGAAGGGGTGGTCT
TACCAGTTACAGCGTCCCCCCAATTCTTGAGGCCCCGAAAGAGAAGGGAAGTTAGGGGCC
CTTGCCCTTTGTTCATTCGCCTGGCTCCTAGCACTGTGCTGGTATGCAGTAGGTGCTTAA
AAAACGGCGATTCAGTGGATTTCCCGCCCCCATTAAGTGTCTGGCCGGAGTGGGGCACTG
GCCAGTCAGGTGCAAACCAGGGACAGCTGGGGCCAGGGTGGCCGGGGATGCTCCCCTGGG
CCGAGGTGAGGGGCACTGTGCACTGGTGGGCCCCACCATCCCCAATGCCTAAATGGCTCT
AGCAGGTGAGGGATACGGGAGAGGGGAGCTTGAATTTCCTCCTGGAAGTGGGGGGCGGGG
AGTGCTACCTCGTTCCTAACCCGGCTTCTTCCTTTCTCCGGCCTGTGCCCGCCCTCTGCC
TGGCTGGGGTCCCTCCTCTCCCATCACCCGTACCCTCTCCTGGACTCCCCCAGTGGTGCT
TGAGGCTACAAGCCCAAGGTGAGCAGGTGGGGGTGGGGGCTAGGGCGGCCACAGCCTTGG
CCTTGGCACCTGGGTGGTGACCTTGTCCAGGTCGTGACCTCTCACCCCACCTTCAGTATC
TTCAGCTCAAGAAGAGGTTGGAAGATGAGTTCCCAGGATGCCTGGACATCGTGAGTCTGG
GGCCCAGGAGGCGCAGGCGTAGGGGGGAGGATGGGTCAGCTGTGCGCCCCAGCCCCCCAC
CATCTCCTTCCCCTGGGGGTCCTCAATCTCCCCTTCACTCCGCAGCGTGGCGAGGGGACT
CCCCAGGTCACCGGATTCTTTGAAGTGATGGTAGCCGGAAAGTTGGTCCACTCCAAGAAG
GTAAGGCTGCTTCCCGCCCATGCTAGCCATGCCCACCTCCACCCCTGCGGTGTGGGGCCG
GCACTGGGACCCCAGCTGACCCAGCCCCCTTCCTCCGCAGAGCGGTGATGGCTACGTGGA
CACGGAGAGCAAGTTTCTGAAGCTGGTGGCTGCCATCAAAGCCGCCCTGGCGCAGGGCTG
AAGGCCTGAGGGCAGAGGTGAGGCCCCCTCCCACCTCCACATCCCTGGGGTGGCCCAGAG
CCTGCGGGGGCAGCGGGACGTGCTAGAAACCCAGCACTCTGCCCCTGGGACTCTGGGAGC
TTGTGGTCCTGGCCGGAAACCCCATCCCAGCCCCTGTGCAGCCAATATGTCCGGACACTG
CTCCCCAACCTCCTGTGTTAGCGACAGAATTCCCACTCCTGGCACTTCCCTCAGAACCCA
AGAACATTCTAGAACTCACCCCCACTCCACAACGTTAGACCCCACGGCAGTTCAGGAATA
TTCTAGAAATAGGGCTGTACCCGCTGGACATTGCCCAAAAGCACCCCAGAACTGGCTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCGCAGTCCAGGGACCTTGACTAGCCCCCCT
CGGCCCCTTTCTCCGTAGTCCAGGGACCTTGACTGGCCCCCCTCGGCCCCTTTCTCTCTC
CGCAGTGCAGGGACCTTGACTGGCCCCCCTCGGCCCCTTTCTCCGCAGTCCAGGGACCTT
GACTGGCCCCCCTCGGCCCCTTTCTCTCTCCGCAGTCCAGGGACCTTGACTGGCCCCCCT
CGGCCGCTGTTTCTCTCTCCGCAGTGCAGGGACCTTGACTGGCCCCCCTCGGCCGCTGTT
TCATGATGGGAAGAACCGAAATGTCTACAGGACGCCTGGTCTTTCCCTGAAGTTCCTGCG
GCCGCC
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