SelenoDB
Release 2.0
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Transcript Report for SPT00001824_2.0
Identity
TranscriptSelenoprotein M (SelM)
SpeciesOreochromis niloticus (Tilapia)
Transcript IDSPT00001824
Transcript release2.0
External IDNone
Gene SPG00001729_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001824_2.0 # Transcript # Selenoprotein M (SelM) # Tilapia (Oreochromis niloticus) # Full length # Forward
CTGATCGTGTTGGCCAGTTTATTTCACTGCGCCTCGGCGTATGATGTGGATCTGAAGAAG
CTGGAGGGGCTGGCAAGAGCGAGGGTGGAGGTAACATGAAGCTTTATTTTTCATAATCCT
CCCCATAAAGAAGAACGCGGGAATAATCAGTGTCTGAGCCAATTATCAGATTAGTTTAAA
CGTGTGAATGGGTGCCCTGCTTTTAAACATTTTGGATTGGGCGCATGCGTGAGCAGGACA
GATGTGTACTAAGCTGAATGGATGCCTCCGTGCGTGTATGGCATGCGAGCTAATGAAGAA
CGCGGCCTCTAATTCTTATTGTTACTATTTTAGTAACCCTAAAATCGTCATCACAAAGTG
ACTTGGTGGAAGCTTAAAAGGGGGGCACAGGGTGTGTAACAGCCGGTCCGGCACAAAGAC
TGAAACTCTACGCCTTTGTCTTTAGAGATCTGTGCAGTCCCCCCCCCAGGGTGTCACCCA
GTCACTTACTTGCCAGCATCACTGAAGCAAATCATAATCTGTTGTTATTGTAGTGTTAGT
CACGCCTCATACCTGAGGCTCAGATATCTGCAAAAATAGGTCGGGTAGCCTTCCCTGGGG
CTGTACTGAGCGTTCTTCAAAGTAAAAACTTGCAGTGATACCAGCACATAAATGACTTTT
TTCTGATTAGGGATCATAACCCTCAAAAATGTATAAAGATGCATTACAGTTGCAGATGAC
GTGTGTTCAGTATTCATGTTTCCAATTCTTGTAAAGCCCCATTTCTGAAACATGAGCTCT
GCATGTAACTTTTTCTTGTTTCTTGTGTTGTTGTCTTTCCTCAGACGTGTGGTGGATGAC
AGCTGAACAGGCTCAGAGAGGCAAGTTGCCCTGTTATGTGAACAAAAGCGACAACACACT
GAGAGCCAGGGGTCAGAGGCAGACTAAAGCCTTACTCCTGCCTAGAAGTGTTTTCTCTCT
GAGGAACATTTTAGTTTAGAGTTTCACATAATCCCTGACAGATTTGCCACTGAAACCCAA
ACTGAGTGGAAAAACACTAATCCAAACCTCTGTCTGCAGGTCAAAGCCTTTGTGGTCCAG
GATATTCCTCTTTAGTATCCTTTCACTGAAGTGTATGCACTGTTACTCTTTAGAAATATC
TGCTCAAAAACTGCATGCTGTTTAATCCCTGAGCACGACCTCAGCCATAACCTGGTGATG
AAGCACATTCCTGGTGCAGACCCTGAGCTTGTCCTCCTGAACCATTATTATGAAGAGCTG
GACGTAAGTGTGTGTTGTGCATTTCTTTTTTGTTTTTTTACTTTTGTAACTTGTATTTAT
TGTTTACTTGCAGCAAATATGACACTTTGTGCTGAATGTCAGAATCAGTTTAATAAGTGA
ACTAAAGCATCTCACCACAAACCACCAACACTTGACATCATTACTCAAAGAGATTACAGC
TGAAATGATGACAAACAGGTGTCCTGTGACCGCTGAGCAGGCTCTGAGCTTTTCCCGTCT
TTTGGATTAAATTAGCTTCAGAGGGAAACAAGAAATCTGCAGAGGACAGGTCATTCTACA
AATATATCCCACTTTGATATGACAAGAATTTACTTTTAACATTTAAACTTGAACTAAATT
ATTACTTAACTGAATATTTAGTTACAAAAATGACAGCTTAATTATTTTATTTTTTTCAAA
TTTCCTCAAAGCCTGGTTGTGCCGTAATTTTTTTTATTTATTTTTTTACTCACCGGTGTT
TCCATTTGAACATGGAAATAAATTGTCACCCTAAAGTGTTTTTGAAGTGTAATATTTACC
GGCAACATTTCCATGAAATGACTCGCAGATCACTTTGTTTACAGCTCGTTACTCTGATTT
AGATTTTACCCACTCGTTGATCATTTATAGTTTAGTCTGGGGCTTCTTTTAAATTTTAAA
GTACTCTTATGATTTAATCAGATTTTTCTCCTTTTTACTTTCCCTGTTCTCAGGTGTTTT
GTTTTTAACGTCAACCATATCTTTTATATAGCCTTATTTTTTTCTTTAACTCCTGTATTT
GTTGCCCTGGTTGTGGTTAACAGCCTTTATCGCATTTTTCTTGCTCCTGTTGTTCCTTCC
TGTGACGTCTTGTATATTTGCATTGTTAATCAGCCTCCACTGGAAAGCTCTTTGGGCCAG
TTCCCATGCTTTTAAATGGGCTGTATAAATACAAATGTCTGTTATGACATTAAAAAGAAC
AGCACATTGGCCAGAAAACTGTAACAAGGATCCAAAAGAAATGTAAAATGTTTCAGAGCT
TTGTAGTTTCATCATCACGAGTGATCTTTTCACACGACACATAATTCATTTGTGCAGGTT
TAATGTTTTTTCAGGTTTCTTTAAACCCATCAATGTTCAGCTCAGCTTTACTGCACTATT
AATATATCGCAGATCAGTGTCTTTTGTTTAGCTCACAGTTTAATGGTCCTTTTATAACAA
GTGCGTTTCCTCCGCAGCGTGTTGCCCTGTCTGACATGACCCGCTCTGAGATAAATGAGC
TGCTGGGGAAACTGGGTTTCTACAAGAAGGCTCAGGCCGAGGACGAGGTGCCGGAGGAGT
TCCGCTTCTCTCCTGCCAAAGACAGCCCGTTCAAAAATGAGCCTGCCCACCAGCCTTCTA
GTTCATCTATAGCCACAGAGAGTGCCTCCTCAGAGCCCAGCGCAGAAGTCAAACACACTG
ACCTGTAAGAGTAGACATCAGCAGTAACAGTCCCCCTCTAGCTCCCTTAACTGCTCCACG
ACCAGCTGATTATCACAGGTGACAGAAATGTTTGTAATTTTAGAGCCTAGCAGATTACAG
ATGAGCCCGTCAGCAGAAGGCCTTTGTAGAAGCTCCACAGTCTGAATTTGCACTTTTTTT
TAATGTCACTGTCCATTGTGTTGTCATCTGTCGTAATGATCTTCGCCTCATTTGAGCTCT
TTTGTGTGTCTGTGATGGCCTCTGACCTACTGTGAAACTAAATGAAGCCTCAGGCTGAAA
ATCGTCTGACTGGCCTGAGGTTGATGCGGCGTGTTCTGGTGGGTT
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