SelenoDB
Release 2.0
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Transcript Report for SPT00001828_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesOreochromis niloticus (Tilapia)
Transcript IDSPT00001828
Transcript release2.0
External IDNone
Gene SPG00001733_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001828_2.0 # Transcript # Selenoprotein O (SelO) # Tilapia (Oreochromis niloticus) # Full length # Forward
ATGGCTTATTTAGGGCCTAGGCTGGGACCGTCACGCGTCTTTCTTTCCGGTGTGTCCGCC
TTAAGACTCCTCTCCTCTGCCGGGATGGACGACATGGGTCTGGCCATGAGTCGTTCTTCG
CTGGAGCGGCTCGAATTTGACAACGTCGCCCTCAAGAAACTTCCCCTGGATCCATCCGAG
GAGCAGGGGGTGCGGCAGGTGAAAGGAGCGTGTTTCTCCCGGGTGACACCACAACCGCTG
ACCAAACCTCGGTTCGTGGCCGTGTCCCACCAAGCTCTGGCACTGCTGGGGCTGGACGGA
GAGGAGGTCGTGAACGATCCTCTCGGGCCAGAGTATCTCAGCGGATCCAAAGTCATGCTA
GGATCTGAACCCGCCGCTCACTGCTACTGCGGACATCAGTTCGGACAATTCGCCGGACAA
CTGGGCGATGGGGCGGCCTGCTACCTGGGAGAGGTGAAGGTTCCGTCTGGCCAAGATCCC
GAACTTCTCCGAGAAAACCCGAGTGGCCGGTGGGAGATTCAGGTGAAAGGAGCTGGGCTG
ACCCCGTACTCCAGGTACAAGGGGTTGCTTTCATTGTCAGTTTGAGTGGTCTTTGCAAGA
TTATGTTTAATTTATTTCAGAATCAGAATACTTTATTGATCCCTAGGGGAAATTATTTTT
CGTTACAGTGCTCCATTATAAACAAACATTAACAAAGACAGACAATACACTAACTAAGAA
TAGCACAATATATACAGGCATATCTATACATAAAAGTCACTTATTAATAAATAGCTGAAA
AGAACATGTGCAAGAAGGGTGTAGCTGTTGCAGTAAACAGTGTGTTAAGTGGATGAGTTG
TACAGGGAGATGGCCACAGGCAGGAATGATTTCCTGTGTCGTTCAGTGTTGCTTTTCGGT
AATCTCAGTCTCTCACTGAACGTGCTCCTGTGACTGACCAGCATGTCATGGAGTGGGTGG
GAGGTGTCTTTATCTTGGACAACATCCGCCTCTCTGACACCACCTTGAGGGAGTCCAGCT
CCATCCCCACAACATTACTGGCCTTACGAATCAGTTTATCGAGTCTGTTGGCATCTGCGA
CCCTCAGCCTGCTCCCCCAGCATGCAACAGCATAGAGGATCGCACTGGCCACAACAGACT
CATAGAAAATCCTGAGCATTTTTTGGCAGATGTTGAAGGACCTCAGTCGCCTCAAAAAAT
AGAGACGACTCTGGCCCTTTCTGTAAAGTGCTGTGGTGTTTTTAGCCCAGTCCAGTTTCT
TGTCAATGTGTACTCCAAGGTATTTATAGTCCTTCACAATGTCAACACTGAGTCCATTTA
TTAGGTTGAGAATAAATGTGGCTTAATCTATTTTTATAACTCCACCATTGAGATTAAAAC
ATGAAAAATACTTTGATTCTCTGTTTTAACAGAGCATATGTGATTGAAGAAGGGCAATAT
TCAGCAATCAGAGGCACCTTTTTTGCTGAGTATTGAAAAAAGTCCTTTTCTCTTCCACAG
ACAAGCTGATGGCCGTAAGGTCCTGCGCTCCAGTATAAGAGAGTTCCTGTGCAGCGAGGC
GATGTTCTTCCTGGGTGTGCCTACCACCAGAGCAGGCTCTGTAGTCACTTCTGACAGCAG
GGTCATACGTGATGTGTACTACAATGGGCACGCTCGCCACGAAAGATGTTCTGTGGTCCT
CCGCATTGCTCCTACCTTCATCAGGTGGGTACACATTACCTGACCTACTTACTCATATTG
AGTTTCTATTTGTGTTTACATGGGATTTGTTTGTGTTCACTACCTGAGCAGGTTTGGATC
TTTTGAGATCTTCAAGCCTGCCGATGAGTTCACAGGTCGCCAGGGTCCCAGCTATGGGCG
CGATGAGATCCGAGGTCAAATGATGGATTATGTCATTGAGATGTTCTACCCTGAGATCCA
ACAGAACTACCCAGATCGGGTGGAGAGGAACGTAGCTTTCTTTCGAGAGGTCAGAGCATG
AGTTACACTCTCACCTGTCAGCGTGTAGAGACAGTGAAATGTTGCAGTAAATCAAAAGTT
GTTATGTACTCAAGATTTTCTGAGCACTGTAGGCCTGGAATAACTTTGATAACATTTTTT
TCTGATCCATAGAAAGACGTTATGATGTAATATGCTCAGGACTGTTCTCAGATTTTAGAG
ACCTGATGGGATTGCTGTCATCTCTTCCTGTATGTAGGTGGTGCTTCGTACAGCTCGACT
TGTGGCTCAGTGGCAGTGCGTGGGATTCTGCCATGGTGTCCTGAACACGGACAACATGAG
CATCCTGGGACTCACGCTGGACTATGGTCCATATGGCTTCATGGACAGGTCAGACATTTG
GAGTGTTTAACTGTATGCATTTTAAAACATTCCTGTCACATATGTTACCATCATACTCAT
TAGGTTAGAGTCACGGAGTCGGAGTGAAACCATAATTATAATACATTAATTATAACACAT
TAGGTTTGAGCGCTTCTTATTTCTCTCAGATTTGATCCAGATTTTATTTGTAATGCCTCG
GACAACTCTGGACGATACTCCTACCAAGCCCAGCCAGCTATCTGTAGGTGGAACCTCGTA
AAGCTAGCAGAGGCTCTTGCTCCTGAGTTGCCACCAGACCGGGCTGAGGCTGTACTGGAG
GAGTACCTGGATCTTTATAACCGTTTCTACTTGGAGAACATGAGGAAGAAGCTGGGTTTG
CTGAAGAAGGAGGACCCTGAGGACGAGATCATGATCACCAAACTGCTTCAGACAATGCAC
AACACAGGTGGACTATTTAGTGTACTGCTTAGAAAGAGAGTTTGATGTGACAAAACATTT
AATCCAGTAACAGACTGAGTCTAAGAATGCGTGCATACGGCACTGCATATGAAACATGAA
AAATATTTAATGATGGATGCAACATTGTAATAACATTTTTCTGCCTCCCTTCTGCAGGTG
CTGACTTCACCAACACTTTCCGTAGCTTGAGTCTGATTTCTTGTCCCACTGAGGAAAATA
GTGAGGGAGAAGAGGATTCTGTCAAGAAAGCCACAGACCTCTTGATTGAGCAGTGCGCCT
CCCTAGAGGAGCTCAAGGCTGCCAACAAGCCCACGATGGAGCCACGGTGAGCTAGCTAAC
AGTTATACTGCTACACACACACAAGCCCAGCGTGTTACGCATCATGGCCAAATTCACTTA
TTATTATTTTTACTTAAAATTATTAGAATAGAAATAATGACTGTGCCTGTGGTGATAATG
TCAAATGTTTTGCTTTTTATTCGGTGTAGTACATATTGCAGCCTCTGGGTGTCACTAGTG
AGGCTTCATATACATCTGTCATGTGAAGGCTGTGTGCAGGCAGGGGTGGTGAAATGGAGG
ACCCAAAGTGGAGACTCCGGAGACAAAACGTGAACTCAAAAAACAGCTTTAATGCTGAAC
TCAAAAAGTAACAAACTTCCAAATAAACTTACACAGGCAGGCAGACAGAACACACAGCAA
GATGAGGGTAGATAAGGGAGATCGCAACACATACCAAAGAGAACACGGGGCTAATACACA
CAGAGGGAGCAATCGGGGAATGAGAGACAGGAGGGAAACACAGCTGGGACAAATCAGGGC
TTACGAGACAAAGGAAGCAAAACCAGACGCATTAACATGAGACACGGACTTTCAAAGTAA
AACAGGAAACATAACACAGAGACGCGGGGCGTTTCTCAATATGCGTACTTGTGCGTACTT
GCGTTCTCGTGTACTCGTGATACGTCATCATTCGGAGACCAAGTACTGTTCCAATTCGAA
GTACGCATCAAGCTGAGAACGCGAAAAAGTCCCGGATGTATTCTCGCTCCGCCCGTTTTA
TCGAGCATGCATCGGTGTGGACTTGGTACAGCTAAATATCCCAGTATGCATTTCGTCCAA
AACTCAACAGCGGACTCCCGGCACATCGTTTTCAACCCCCCCCCGGACTTTTCACTACTC
AGGTTAAAGACACCCCAGCAGCTGTCTATAGTATTGAGTGTCCACTAAAATAGAAATAAA
AGCGTTCTAACATCTCACCTGCTTGTTTTTATTAAGGTCTGTACAGGTATGTACATGTAC
ACTATTTTTATTAATAGAGGTTTCACTACTGAGGTTAAAAATGATATATAAGTCACTTAG
ATCACTTCTAAATGTTAATGTTTGGTTTATTTCAGTGTTTTATTTGTTCCTGAGTAAACC
GGTTTGGCTGTGATTAAAGTTAAGCTTCATAACATGTTACTCACAGTTAAATTAAGAGGG
GACGGCAGTAAAAACTCCGGACCTGTGACATCATCACGTACGCAGGTGTTCCAATTGTAC
ATATCGCGAGTCCGTGCTCGCGTTCTCGGCGGGTACGTACTCACTGAGAACGCGAGTACG
TACTCGCGTACTTGAGAATTGAGAAACGGCCGCGGACTTGACAAGGGGATACAGCTGACA
GGGGAGACAGAGCAACTACAGAACACAGAGACAAACCATAAGACAGAACTCTAACAAAGA
AACCAAAGACTAGAAATGATAAATAATATAATAAACTCAAAACTCTGGGTCAACGACCCA
GGCACCCTAACAACATCATGTCTTTACAGTTTATCAGTATGAAGTTTCTTAAAGCAGCAT
CTGTTGATATTTTTGGTCACTTGAAGGCAGCAGAAAATGATGCAAACATTGATATTATTG
TTTCCATTTATTCACCCATCGGTCAATCCATTCATTCATTTTTTAAAATTGGTTATCCAC
TTAAGGGTCAAAGGAGTCTAGAACATATGAAACATGACGAGAGGCAGCGGTCACCTGAGC
AGGTTGGCAGTCTATCTCAGGGCTAACACAGAGTGACTGCCAACTATTCATCCTCATATT
CTTACGTGCAGCCAGTTTGGAGTCACTAGTTCACCTAACTGCACCTCTTTGTACCGTGGA
AGGAAGCCGGAGTAGCCGGTGTGCAGTCACAGAATCTTTTTCCTGTGAGGTGATAATACT
AACCACTGAACACAAAGTAAAATTATCACTCATTTTAGGTCACATCCCTGTCCATCCAAC
ATTTTTAACTCTAAAATCTGTCCAGTATCAACAGAAAGCAGTAAGAATCGCAGTAAATAA
ACAGGGATACTGTAACACTTTGACAGAGTTTTTGGAAGCACTTCGGACCTTGTTTTGGTT
TGCACCCAGTGGGACTGTTTTTTCTTTTCTTTTGGAAGACTTTTGGAAATGATACCCATA
TTTGCTGTCTGTTGGATGTTATCAGAAACCATATGCCCTTCCCGGATCCTTCACATCCAT
ATCACATGTCCATTTTCCTAGAAGTAGACAAATGCTTTAACAAATTCAACATGGACAATA
AATTACTGCCATCGCTGACCTTGTTTGCCTTTGTTAGCAGCTGTTGTGCCATAATTTTAT
TATCCTTCTACTGCCTACCCAGCATAGCTTTCAAGCTGGTCCTAAAATGCTTATTTGAAG
TGTTGTTGTTGTTTTTTTTAGTTTTTGTTTTTTTTATGGGACCCTGTAATCTGATATCTT
TCTGTTAAAATGGGATTTGAAAGTATTAAATTTGATTAAAATTTCTGAAACCCAATCCTT
ATCAAATTAATTTAGGAGGGTAATGGTACCTGTGATGCATTTTTCCTGAATGGCAACGAG
TGTCTGCAGACTGGAGAGAACATTTGATGGAAAGAATCTGGAGCTCAAATACAGACAGAA
ATAGCTGAGCTCATTATTTAGCAAGTGAAACAATTATAAAGAAAATATTTAATTCTGCGT
TTTATGATGCCCCAAATTATGTGGAAAGTTGGTCCCTGACTAATCTAGATATAAAGATGG
ACTTTAGACTGAGTTTTGCGTAACCCAGTCTTTCTATGGATGCAAACAGTCACTGGACTC
TTTATCTCAGTACCTTATTTTCTCTCTAAACTCTCACATTGCCTGCACTATTTCTGTGTT
TTCTTTCCCAACGTATTTATTTTTTGGCCTATAAGAATTATAACAGTAATGTTTTGTATT
TGCAGTGAACTGGCAATGCTGCTTTCTATGGCTCAGAGCAACCCAACACTGTTCCAGATG
ATCTCAGACAGAGCAACAATTGCGAGGCAGTTAGAGCGACTCAGCAAACTAAAGGATCTG
ATGGAGACCACCCAGGAGGAGCTGAAAACCAAACAGGCAGAGGATTGGACATCCTGGATC
ACTCAGTACAGGTGAGACGGGGGCAAAAAAAAATGAATGAGTAAGTTTTATTAGCAAGGG
ACGAGAAAGAAAAGCATGGAAAATGAGAGCAGAGGAGGAACTGCATAGACCGGATTAGCT
TTTGGGTTTTTTTAAAATGTGCAAACAGACAGAAAAAAGAGGAAATGTGTGTCGAGGTGA
TTGTTGTTCCTTTGCTGCAGTTCTCTGAGGGAACGTTTTGTGTTATCACTGCCACAGGAA
ACGTCTGGCTCGTGAGCTGGAAGGCCAGAGTGATGTGCAGGCTGTGCAGGAGGAGAGAGT
GAGGGTGATGGACAGCACCAACCCTCGCGTGATACTCAGAAACTACATTGCCCAGAATGC
CATAGAGGCTGCTGAGAATGGGGACTTCTCTGAGGTCAGGTTCCAGTCGATTGTAATTTT
TACTAGATAGAAACATAACTACATGTTTGTCTGCTGTACATTTTGGTAGAGAAATATGGA
CAACTTCCCTAGAAGCATTCACTGGAGATCAGACTGTTCTTCATTTACCCTTAATTCCCT
TTTCAGTTTTTCATTTTCAGTGTGATGACCCGGTCTCACTTCTGCTCTTTGCTGCAGGTC
CAGCGTGTCCTCAAGGTTCTGGAGAAGCCTTTCTCTTCACAGCCAGGTCTGGAGCTCCCT
GCGTGGGTTGGTGGAGGTGGGACCAGTGCAGAAGGAGAAAGGGATGAAGGAGAGGAGCAA
GAGCAAGAAGCAGCTACCTCTATGGCCAGAAATCCCGTGCCTTATGACAGCAAGCCCCCA
GCTTGGGCCCATGAAATCTGTGTCACATGATCTTCGTAGTAACTTCCTTGACTGTAATCT
CTCCTGCATAAAATAACAAGAGAGTTTCAAGGTGTTTAAAAAAATTTTTTTTTTCACATT
TTTATAACTCTTCAGCTACTGGACAACTTTGTTATTTTAGCAGGCAGTTTCAGGAAGGTC
GGCATGAGGCACGGCACCTCACAGGCAAGCTGGATGGCACAAAACAGACAGGCAGTGTGT
TGAGTTTGTTTCCACAAAAAATACAAATTCCATAGAAAATTTAAAATATATATATATATA
TATATATGTTTTAAAGCTATAATAACAGTTTTTTGTACCCCTGTTTAACATTTGAGTCAT
CCTTAAATAAGTGGATGAGATTTATATAAAATTTATATGTGATATTGTGCAGTTTAAGCA
GTACATTTACAGAAACTCGGGTCAGATTTTTTTTTTTTTTCCTGTCTTGTTTTGTGTTTA
ATAAGCTATTAATGATGAGTCAGGCAACAAGTCTTACAGTGGCCTGTCTGGCTCTGACAA
GCTGTGAGGTGT
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