SelenoDB
Release 2.0
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Transcript Report for SPT00001967_2.0
Identity
TranscriptSelenophosphate synthetase 1 (SPS1)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001967
Transcript release2.0
External IDNone
Gene SPG00001873_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001967_2.0 # Transcript # Selenophosphate synthetase 1 (SPS1) # Medaka (Oryzias latipes) # Full length # Forward
ATGTCCGTGAGGGAATCTTTTAACCCCGAAAGCTATGAGCTGGACAAAAACTTCAGGCTT
ACACGCTTCACCGAGCTCAAAGGCACAGGCTGTAAGGTAATATGTTTACATTATAATCTA
CTTTGGATAAAAGAAGGATTTAAATAGAAGATATATTGTAATTTGGGTGCATTGTTTTTT
TTTAATGACTACAGGTCCCCCAAGATGTGTTACAGAAGTTGCTAGAAAGCTTACAGGAAA
ACCATTATCAAGAGGATGAACAGTTCCTGGGGGCAGTTATGCCTCGATTAGGTAAAATCT
TCTACTCTTAAATTTGATTTAAGACTTTTTCATACTTATTAATAAGTTGTAAAAGAGTAT
CTTGCTAAATCGGATCCAAAGACATTCATGCTTTAAGGACATTCAGTCAGAAAGTGCACA
ACTATTGTGTTTGTTGTCTGACAACAACCCCTTTCTCTGTGTTGTAGGCATAGGAATGGA
CACATGTGTGATTCCTCTCAGACATGGTGGTCTTTCCCTTGTCCAAACAACAGATTACAT
CTATCCTATTGTAGATGACCCCTACATGATGGTATGGACCTCACCTGTATCTGGAATGAT
TGACTGGCTACCCTTTGGTTTTGTTGTCTCAAAACGCTCTTGTACTTTCATTTGTCCCTT
TTTTATTTTATTTTTTAGGGAAGAATTGCTTGTGCCAATGTTCTAAGTGACCTTTACGCC
ATGGGAGTAACAGAATGTGATAACATGCTGATGCTTCTGGGAGTCAGCAACAAAATGTCG
GAGAAAGTAAGAGACTTCCTGTAGATCATGTTTCTGAGAAACAGAGGTTAACTTTTCTTT
TTGGGATGGTGTTTGTTCACCATCTGCTACTAATATTTACTCTTTAACAAGTGTTCATAT
CTTGTAAATAAACCATTCATAAACAGTTTAATGCTCAGGAACACATAGTCCAATCTGAAG
ACAGTAAAACAAACAATTTTCTGTGCTAGTGATGTCAGAAATGCAAGCAAAAAACAAACA
AACTAAATAAGTTGCAATAATCACACGAAAACGTTAGTATAGAGAAAGTTGACAACATTT
TGAAAATGAAACCTGAATTGTGACCCTCATTCATCATAATTGAACATTATTTGTGATTTA
TGGAACACTGAGAGGTGCTGTCTCAGGAAAAAAGCAAAGCTGATGTAAGCACCTCTAAAG
TATGAGCTTGTTATGTTGTTGTTTTTTTAAACCTTGGTGGCCGTTTCAGTATAAAGACTT
GGACTTTTTTTATCACGTCATGCTTTTTGTATCAAAAAATCCTCTAAATACACTTTTTTC
CTCTGCACTTGTCGGTTGTGTGGCGTCACTAAAGTTTTTCTTCGATTACACCCATCTGAC
CTGCTGAATGGCTAAAATCTAAGTCTGTACCTCAAAGGTTTTGCGCATTTTTCTGAAAAG
CTTGGGCACATATTCTGGCTAAAAGGGTGCTGCAGGTTCTGCTCACCTGCCTTCAGTGAG
AGCAGCAACAGCAGTTTGATGTGGGCAGGGCAGAGGACCAAGCCTGCTGTATTCAAGTGA
TTGGATCATGATCTATTGAGATTTAGCAATACAGTCCTTTCAAGTACAAATAACATATAT
TATTCTCTGGATCTTTGTTCACAACTCTTTGTGTTTTTAGGAAAGAGACAAAGTCATCCC
ACTGATCATTCAAGGATTTAAGGACGCGTCAGAGGAGGCGGGCACATCTGTAACAGGAGG
TCAAACCGTTCTCAATCCCTGGGTCGTGATGGGAGGAGTAGCAACAACAGTCTGTCAGCC
CAACGAGTTTATCATGTAAAAAAAGGCTTTTGCTTCCTAGTGTTGTGTTTTTTCTGGTTA
AGGGTAAAACCATAATGGAGACCTGTCCTTTTTTTAGGCCAGATAATGCAGTGCCAGGAG
ATGTTTTGGTGTTAACCAAACCGCTTGGAACACAAGTGGCTGTCGCGGTGCACCAGTGGT
TAGACATTGTACGTGTCCCATTATAATGCTCAGGTAAGAATAATTGTTTCTGAGGTTGTC
AATAAAGATTGATAGAATTCTTTTCTCCTAGCCTGAAAAATGGAACAAGATCAAGCTGGT
GGTAACCCAGGAAGATGTGGAGTTAGCCTACCATGAAGCCATGATGAACATGGCTCGGCT
TAACAGAACAGGTAAAAAAAAAAAAGAAATCAGGGATGTTACATAAATTTGGTTTTCAAC
CACTACTGGATCAATTGTTCAGGAGTTCCATTTTGAACCACAGCAGCCCCTGCAGTAACA
GGACTGCACTGCGGCCCACATATTTTGATTGATTGACTGACTTTTAAGCAATTGATAAAA
AACAGAGAAAAAAAAGGCAATACAGATACATAGATATATCAAATCTATTTGAGATATTGA
TTTATAAACTGATCAGAAATGTTATAAAAGAAAATGATGATATCTACTTGCCATTATAAT
CGCTACTTACTTTTTATTACTTTTTTGCATTTTCTAAAAGAAGGAAAACCAACATTTTTT
GGTTGTTTATAGGTTTAGCTGTTGATTTAACATTTACTAAATATAAAAACTATTAAGTCC
CACTCTGATCATCTTTTCAACTATTTTAAAAGCGCTCCTAGTGGTCTTTTAATTATTATT
GTGCCATTTTTCATCAAAATCCCCAAAAACCTGTGTTGTTTTCTGAGACATAGTTTCTGC
AGGGCAACAATAGTTCATTAGAAATTCACCTCTGAGTGACTATTGGACTATTGAAGCTGA
GCAACCCCGCCCCCCTTCCCCTACCTGCTGCAGAGTATAGCAGGAGGCTTGTGACACACC
CAGCGTATTTTCTACGTCACAATTTTCTAACAGCATTTTTTTTAACTGCTCCTGAATCCT
AACATTTTGATAAAGAAATACTCGGTAAGGCAATTTTAAGACTAATTTTCTTTATAGATG
ACCTCTCATCAGAAAAAGGCCACAAGTGCAAGTTAAAAACACAAAAAACAATCTTTAGGA
GATTTTTTTCAAGGGTTTATTTTATTGTTCTCTGATCACAGTAGGAAAAAAAAAAGCAAA
CACATTTTCTTTCCCTTCGCAGCTGCTGGCCTTATGCACACCTTCAACGCCCATGCAGCC
ACCGACATCACAGGCTTTGGCATCCTGGGACACGCTCAAACGTTGGCACGACAACAGCGC
AGCGAGGTCTCTTTTGTCATCCACAACCTCCCAGTTCTCGCCAAGATGGCTGCTGTCTCC
AAGGCCTGCGGGAACATGTTTGGACTCATGCATGGCACCTGCCCCGAAACATCAGGTGTG
TGGTCACCTGGTTCTATCTTTGCACAAGCGGATGTCCTTTTAGTTTAAGCTCCACAGAGT
TGGCAGAGAATGATGTTGATTTTAACCACAGACCTGGTTTTTTTTTTTGCCTTTTAGCAC
GTTTTTATCTGTTTTTATGTAAAGAAATCCCCCCCTTTTTTTTTAATAACATTTTGCTTA
TGAAAGTTTGACATTTTAGGATGTAGGTTTAATTTGTAGAATACCAGACTCGACATTTTT
CCTGCATTAAAAGGGGCTCATAATGTCCTAACAGTTTTTTGTTGCAGCAGAACTCAGAAG
TGCTGCTCAACTGATACTATTTTGTCATAGAAAAAACAATTGACCTTTTATAAATCTGGC
CTGGAGGACCCATGTCTAGTTTTTAGGAGCACACAGAAAGAACTATTAAAGAACATCATG
CTGTATCTTTATTTTTATGTTGAAAAGTAAAGGGAGTCACAATATGTTTTGGGATTGGTT
AAAAAGTAATGACAAATGTTTTCTAAAAGAGAAAACTGGAAAGTTATTTAAAAAAATGTT
TCCGTGCAGGAGGCTTGCTGATCTGTCTGCCCCGGGAGCAGGCCGCCCGCTTCTGCGCTG
AGATTAAATCCCCCAAATACGGAGAGGGACACCAAGCGTGGATCATCGGGATCGTAGAGA
AAGGAAACCGCACCGCTCGCATCATTGACAAGCCCCGAATCATAGAAGTGGCGCCGCAAG
CGGCCACGCAGAATGTCAACCCGACTCCTGGTGCAACATCCTAA
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