SelenoDB
Release 2.0
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Transcript Report for SPT00001967_2.0
Identity
TranscriptSelenophosphate synthetase 1 (SPS1)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001967
Transcript release2.0
External IDNone
Gene SPG00001873_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001967_2.0 # Transcript # Selenophosphate synthetase 1 (SPS1) # Medaka (Oryzias latipes) # Full length # Reverse
TTAGGATGTTGCACCAGGAGTCGGGTTGACATTCTGCGTGGCCGCTTGCGGCGCCACTTC
TATGATTCGGGGCTTGTCAATGATGCGAGCGGTGCGGTTTCCTTTCTCTACGATCCCGAT
GATCCACGCTTGGTGTCCCTCTCCGTATTTGGGGGATTTAATCTCAGCGCAGAAGCGGGC
GGCCTGCTCCCGGGGCAGACAGATCAGCAAGCCTCCTGCACGGAAACATTTTTTTAAATA
ACTTTCCAGTTTTCTCTTTTAGAAAACATTTGTCATTACTTTTTAACCAATCCCAAAACA
TATTGTGACTCCCTTTACTTTTCAACATAAAAATAAAGATACAGCATGATGTTCTTTAAT
AGTTCTTTCTGTGTGCTCCTAAAAACTAGACATGGGTCCTCCAGGCCAGATTTATAAAAG
GTCAATTGTTTTTTCTATGACAAAATAGTATCAGTTGAGCAGCACTTCTGAGTTCTGCTG
CAACAAAAAACTGTTAGGACATTATGAGCCCCTTTTAATGCAGGAAAAATGTCGAGTCTG
GTATTCTACAAATTAAACCTACATCCTAAAATGTCAAACTTTCATAAGCAAAATGTTATT
AAAAAAAAAGGGGGGGATTTCTTTACATAAAAACAGATAAAAACGTGCTAAAAGGCAAAA
AAAAAAACCAGGTCTGTGGTTAAAATCAACATCATTCTCTGCCAACTCTGTGGAGCTTAA
ACTAAAAGGACATCCGCTTGTGCAAAGATAGAACCAGGTGACCACACACCTGATGTTTCG
GGGCAGGTGCCATGCATGAGTCCAAACATGTTCCCGCAGGCCTTGGAGACAGCAGCCATC
TTGGCGAGAACTGGGAGGTTGTGGATGACAAAAGAGACCTCGCTGCGCTGTTGTCGTGCC
AACGTTTGAGCGTGTCCCAGGATGCCAAAGCCTGTGATGTCGGTGGCTGCATGGGCGTTG
AAGGTGTGCATAAGGCCAGCAGCTGCGAAGGGAAAGAAAATGTGTTTGCTTTTTTTTTTC
CTACTGTGATCAGAGAACAATAAAATAAACCCTTGAAAAAAATCTCCTAAAGATTGTTTT
TTGTGTTTTTAACTTGCACTTGTGGCCTTTTTCTGATGAGAGGTCATCTATAAAGAAAAT
TAGTCTTAAAATTGCCTTACCGAGTATTTCTTTATCAAAATGTTAGGATTCAGGAGCAGT
TAAAAAAAATGCTGTTAGAAAATTGTGACGTAGAAAATACGCTGGGTGTGTCACAAGCCT
CCTGCTATACTCTGCAGCAGGTAGGGGAAGGGGGGCGGGGTTGCTCAGCTTCAATAGTCC
AATAGTCACTCAGAGGTGAATTTCTAATGAACTATTGTTGCCCTGCAGAAACTATGTCTC
AGAAAACAACACAGGTTTTTGGGGATTTTGATGAAAAATGGCACAATAATAATTAAAAGA
CCACTAGGAGCGCTTTTAAAATAGTTGAAAAGATGATCAGAGTGGGACTTAATAGTTTTT
ATATTTAGTAAATGTTAAATCAACAGCTAAACCTATAAACAACCAAAAAATGTTGGTTTT
CCTTCTTTTAGAAAATGCAAAAAAGTAATAAAAAGTAAGTAGCGATTATAATGGCAAGTA
GATATCATCATTTTCTTTTATAACATTTCTGATCAGTTTATAAATCAATATCTCAAATAG
ATTTGATATATCTATGTATCTGTATTGCCTTTTTTTTCTCTGTTTTTTATCAATTGCTTA
AAAGTCAGTCAATCAATCAAAATATGTGGGCCGCAGTGCAGTCCTGTTACTGCAGGGGCT
GCTGTGGTTCAAAATGGAACTCCTGAACAATTGATCCAGTAGTGGTTGAAAACCAAATTT
ATGTAACATCCCTGATTTCTTTTTTTTTTTTACCTGTTCTGTTAAGCCGAGCCATGTTCA
TCATGGCTTCATGGTAGGCTAACTCCACATCTTCCTGGGTTACCACCAGCTTGATCTTGT
TCCATTTTTCAGGCTAGGAGAAAAGAATTCTATCAATCTTTATTGACAACCTCAGAAACA
ATTATTCTTACCTGAGCATTATAATGGGACACGTACAATGTCTAACCACTGGTGCACCGC
GACAGCCACTTGTGTTCCAAGCGGTTTGGTTAACACCAAAACATCTCCTGGCACTGCATT
ATCTGGCCTAAAAAAAGGACAGGTCTCCATTATGGTTTTACCCTTAACCAGAAAAAACAC
AACACTAGGAAGCAAAAGCCTTTTTTTACATGATAAACTCGTTGGGCTGACAGACTGTTG
TTGCTACTCCTCCCATCACGACCCAGGGATTGAGAACGGTTTGACCTCCTGTTACAGATG
TGCCCGCCTCCTCTGACGCGTCCTTAAATCCTTGAATGATCAGTGGGATGACTTTGTCTC
TTTCCTAAAAACACAAAGAGTTGTGAACAAAGATCCAGAGAATAATATATGTTATTTGTA
CTTGAAAGGACTGTATTGCTAAATCTCAATAGATCATGATCCAATCACTTGAATACAGCA
GGCTTGGTCCTCTGCCCTGCCCACATCAAACTGCTGTTGCTGCTCTCACTGAAGGCAGGT
GAGCAGAACCTGCAGCACCCTTTTAGCCAGAATATGTGCCCAAGCTTTTCAGAAAAATGC
GCAAAACCTTTGAGGTACAGACTTAGATTTTAGCCATTCAGCAGGTCAGATGGGTGTAAT
CGAAGAAAAACTTTAGTGACGCCACACAACCGACAAGTGCAGAGGAAAAAAGTGTATTTA
GAGGATTTTTTGATACAAAAAGCATGACGTGATAAAAAAAGTCCAAGTCTTTATACTGAA
ACGGCCACCAAGGTTTAAAAAAACAACAACATAACAAGCTCATACTTTAGAGGTGCTTAC
ATCAGCTTTGCTTTTTTCCTGAGACAGCACCTCTCAGTGTTCCATAAATCACAAATAATG
TTCAATTATGATGAATGAGGGTCACAATTCAGGTTTCATTTTCAAAATGTTGTCAACTTT
CTCTATACTAACGTTTTCGTGTGATTATTGCAACTTATTTAGTTTGTTTGTTTTTTGCTT
GCATTTCTGACATCACTAGCACAGAAAATTGTTTGTTTTACTGTCTTCAGATTGGACTAT
GTGTTCCTGAGCATTAAACTGTTTATGAATGGTTTATTTACAAGATATGAACACTTGTTA
AAGAGTAAATATTAGTAGCAGATGGTGAACAAACACCATCCCAAAAAGAAAAGTTAACCT
CTGTTTCTCAGAAACATGATCTACAGGAAGTCTCTTACTTTCTCCGACATTTTGTTGCTG
ACTCCCAGAAGCATCAGCATGTTATCACATTCTGTTACTCCCATGGCGTAAAGGTCACTT
AGAACATTGGCACAAGCAATTCTTCCCTAAAAAATAAAATAAAAAAGGGACAAATGAAAG
TACAAGAGCGTTTTGAGACAACAAAACCAAAGGGTAGCCAGTCAATCATTCCAGATACAG
GTGAGGTCCATACCATCATGTAGGGGTCATCTACAATAGGATAGATGTAATCTGTTGTTT
GGACAAGGGAAAGACCACCATGTCTGAGAGGAATCACACATGTGTCCATTCCTATGCCTA
CAACACAGAGAAAGGGGTTGTTGTCAGACAACAAACACAATAGTTGTGCACTTTCTGACT
GAATGTCCTTAAAGCATGAATGTCTTTGGATCCGATTTAGCAAGATACTCTTTTACAACT
TATTAATAAGTATGAAAAAGTCTTAAATCAAATTTAAGAGTAGAAGATTTTACCTAATCG
AGGCATAACTGCCCCCAGGAACTGTTCATCCTCTTGATAATGGTTTTCCTGTAAGCTTTC
TAGCAACTTCTGTAACACATCTTGGGGGACCTGTAGTCATTAAAAAAAAACAATGCACCC
AAATTACAATATATCTTCTATTTAAATCCTTCTTTTATCCAAAGTAGATTATAATGTAAA
CATATTACCTTACAGCCTGTGCCTTTGAGCTCGGTGAAGCGTGTAAGCCTGAAGTTTTTG
TCCAGCTCATAGCTTTCGGGGTTAAAAGATTCCCTCACGGACAT
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