SelenoDB
Release 2.0
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Transcript Report for SPT00001970_2.0
Identity
TranscriptSelenoprotein K (SelK)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001970
Transcript release2.0
External IDNone
Gene SPG00001876_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00001970_2.0 # Transcript # Selenoprotein K (SelK) # Medaka (Oryzias latipes) # Full length # Forward
ATGGTGTACGTGTCGAACGGTAAGTCGTTACCACCGTCTATTACTGTGTTTTCTTAACTT
TTTGAGCACTAAACACAATCTTGGCCTTTTAGTAGATATATAAGAAATTCCCGAATAACA
TAAAACACGACTCAGAACACGGTAATGATATAAACAATAGGGCTAGATTTGGAGCTAATT
AGCTTAGCATAACTGACTGCGCAGCCTACTTGAAATAGGTCTTAAATTCACGTAGCAGTG
AATGTATGGATGTACATGTTTTTCTGCAACCTGACAGTAAAATGCCTAACCTAACAATGT
ATTTTGATAAACTGCTTTTCTTGCATTATTCCCTCAAGCCCTGGCGTAGTTGCATATAAG
TATTGGACTGTGCCTGAATGCTTAGCTGTTGGATGTGAACACACTGACTGAATACATATG
TCAGAACACCTGCAGTCTCACGCCCATCACTTTGTATGTATATATATTTTTTTCCTCAGG
TCAGGTCCTGGACAGCAGGGCTCAGTCGCCATGGCGACTTTCCTTACTGGTGGATCTTTT
CTGGGACGCACTGGAATTTTTCAGGCTCTTGTAAGTCCTATCACAAGACACCATTCTTGC
TATTTGTTATGTGTCTTCTTAAGGACTAAACAATTAATGGTGAACAGTATCAAGAACTTT
GATCAAAGCACACCAACCATAAAAGTAGTCTACATTGATTGTACTCTTACAGCTTCAAAA
CCATGTTTCATCCTGACTTGACAAAGGACGGAAACTCAGCTTCATCACGCTTCAGTGACG
GCAGAGGGTAGGTTGAAACTTAAGCTGTTTTATTCATTTGAAAACATTTTCTTGATTTAA
TCAAAAGTATTTTAAGATCATTTACACATTTACTACGAAGTATTTGATCATTTTTGACTA
CATAAAGAGGTGCAATTGTTTTTACTTTTTCCTTTAAACAACCAAACACCCTTGGGAACA
TATTGAGCTGAGAAGTTAGAAATGAAACCACATACCGGTTCACTTTTTCCACTGAAGCAT
GACAAGCAAGCCCACTCTGTTGAAAACTGTTCTCGGTGTTTAACCGACAACATTTCAGTC
CAATTCAGATTGAAATGGCAATTCTGAGTATTCCTTTATTCAAATCGATATAAATCTGGA
GCTGAAGAAAAAAATAGTATCTGTGACAGAAAATACGCTGGGTGAGCCACAAGCTCCCTG
CTCTGCTCTATTCTGATGCAATGTGGCGTAGATGACTAGATCCATGTGGGTCTTTGTTTT
CTGGCTCACAACTTTAAGGCTGGATAGCTCCAATATTGCTCGCTATTTTTGTTAATTGTT
AATGTTAGGTTGGGGGTGTGAGGGACTGTAAGCTAACGGAAGAGCATGTAAACAAGTAGC
TCAGTTATGAGTAAGGGTTAGGGCGGTGGGAAAGCTCTGTACCAGTGGTCCCACCCACTC
CTCGGAGGCAAATTTCTAATGAACTAATGCCGCTCTGCAGAATCTATGTCCTAGAACATG
TTTGGCTAAAACAGCATCATCATAATTAAGACGATTGGGAACACTTTAAAATGGATCATA
AGTGGATTGGTTTCTAGAATCCTCTGCTTTTGTCGTTTGCCTTTCAGTCCTCCAGGACCA
CCCGGTGGCAGGAGACGGATAGGAAGAATAAACCATGGTGCAGGACCCAATGCTCCACCA
ATGGGAGGAGGAGGATGAGGAAGGTGAGAGCTCGTTTCACAATTCAAAAAATACATCATA
CAACTAACACATTCTTCTTCTATAGTCTATCCTACCAAAGGCAACACTTCTTGCATCACC
ACATATGTGATCAGCTGAAAGTAAATGCAAATGAATAGAAACCTCAATATTTGCATTTCC
TTCTACTTGTTTGTTTTGTCATTCATTTGCAGCAGATCCCACAGTTCCGACCCATGACTT
GCTTTAACTTAATAACATATTGATTATTTACACAGAGTAGAAAGTCTCACATCAGATGTG
GGACTTTCTACTGTGTGTTTTCTGTATCTGCATGTTTTTCAGGTTAGAATTTACTGGAAC
TTGTAGTTACTTTTAAAACATCCTTTTAAGGTACTTCAAGCATTATTCTAAAATGATTTT
ATTCTGACTTTCTTATAGGTAAACGCCTACACGTGTAGTGTAGGCGCGGGGCCTAACTCA
GCAGCTGTGACAACGCCCTGCTTGCTGTCCTGGAGCCCCTCTTCATTCGCTGCTACTGCC
TCAAGCAGTTTCCTGACGCCTCTCTGGGAATTCCTTCATTTAGGGACCAGAATGGCTGAT
AAAGCAGCAGCCTC
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