SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00001971_2.0
Identity
TranscriptSelenoprotein H (SelH)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001971
Transcript release2.0
External IDNone
Gene SPG00001877_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001971_2.0 # Transcript # Selenoprotein H (SelH) # Medaka (Oryzias latipes) # Full length # Forward
AAAAGCTGACGCGTTTACGGGCGGAATGCAGAGGAGGTGAAGTCTGCCCTCCTGGCTGCC
CGCCCTGAGCTGACGGTGGTCTGCAACCCGGAGAAACCCCGCAGGAACAGCTTTGAGATC
ACTCTGCTGGATGGAGCCAAAGGTGAAAGAGGATGAGACAGCACATCCGAGACTAAATCT
GCCATTTGGTGCCCAAGGGAAGACCCTGCTCTAAAGCGACCCAGTTTTTAGCAGCATTAT
TTAAGGAGCTCTGAATATGTTCTGCTCGTATTCCACATACCAACAGCAAAGGATTTTGAA
ACAATCTCTTGCTGCTATTGGTAATATGTTTTCTATGTCTGATCTTTGTAGAAACCTCTT
TGTGGACGGGGATAAAGAAGGGTCCACCTCGAAAGCTGAAGTTCCCCCAACCTGATGATG
TAGTTGCTGCTTTCAAAGATGCTTTGAAGACTGAATAGGTGGCCGTGCAGGTTTGTCAAC
ATTAAACAAGGATTTTAATTTAAAATGTTCCCTGTGTATTTCATAATATTATCACATTTC
TGAGCTAAAATTTAGAAAATTAGCGTTTTGGGGATGAGTTTCTAAAGGTCCCACTCCAAT
TATATTTGTGTTGGTCCTAAAAGTCTCTCCAGCGATCTTTTAATTATGATTGCTGATGCT
GTTTTTAGCCCAAGTCAAGAAACCTGTGTCGTTTTTTAAGACACTTTCTGCAGAGCAGCA
GTAGTTCATTAGAAACATCCCTCAGATTTGTGGATGGGACTGTTGACGTAACCCTACGCT
GATATCCTGTCATTCCTTTGTTTACACTCTCTCCTGCTAGCTTACAGCCGCTCACAAGCC
CAACCCAACATTACCCATGCAACAAAACTGGCAAACAATATCACAGCCATCCAACCGTAC
AGATTTGAGCCAGATGCCAACTCAGACGAGGAAAATGAAGACATTAATGTATCCAGTTGT
TTGCAAGTGGATGCATCAAAATTTGAGCGTAGCAGGGAGACTTTAGCCTGCCCATTCAAG
ATGCTGTCACACATGAGCTTTTTCACACTGCTGGACTTTTATCAGCTTCTGATCCATCAC
GATTTGAACAAAGAAACACAGTTTTAATCTTCAATACGTTATATGTCCTCCATTATGACA
GAAATGTACAAGAACATGTTAAAAATACTATGTTCATTGGAGAGGGCCTTAAAGAGCTGT
TGTGTTCTAGATGCTGTGGCAATCCCTAACAGGATGAGCCAAAAGGTGAACAATAACATA
ATATGATGTTTAAAAAAATCTTTCTCATCTGTAGGAAATGTGATTGGTGGAAGCATAATG
ATGAAGAGTGATGAAGGAGATCTTCTCAGTCCCTCTTCTGACAAACTGAGCTCCAACCTA
T
Chart Advanced