SelenoDB
Release 2.0
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Transcript Report for SPT00001976_2.0
Identity
TranscriptSelenoprotein M (SelM)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001976
Transcript release2.0
External IDNone
Gene SPG00001882_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001976_2.0 # Transcript # Selenoprotein M (SelM) # Medaka (Oryzias latipes) # Full length # Forward
CTGATCGCGCTGGCCGCCGTTCTTCATTGCGCCTCCGGTTATGATATCGACGTGAAGAAG
CTGGAGGGGCTGGCGCGAGCGCGGGTGGAGGTATGGAGCTTTCTTCATCCTCTGATCATG
GTTTATTTCGAGTTTATAACAATCATACCTTAGGGCCGACAAATTGTCTGAAAGGGGCTC
TTTTTTTCGACCTACAAAATTTAAGTGTTGTGCGCATGCGTAAGGGGCTCTGGAGGACTT
GGTACATTTTTAATAAAATGATAAAATCAAGGATTTCTCATAATGATCATAACTGTTACT
GATGTTAATCATTCCGTAATTCACTGTAATTCATCTCATAACTGTAAAAAAATCTGATTA
TTGTAAACATATTCTATAATAGAGAGATCAGGTTGTGCAGGTGAAGCACAAAAGCTTTTG
TATTTGTGTAGCCTACTTACCCCTGGGTGGTAAAATCAAACCAAACTGACAAAAAGTATT
AGCTTGCTTGAGATGCTGTTGTGCTAGAAACCTATTTGCAGGGAGATTCCTCCACAATAA
CAAGTTTTGAATCTTTTTCATAGATTTTTGAGGGAAACAGGGATTACTTTGAACAAAAAT
ATAAGTAAAATGTGCACAAAAACAAAACATAACTTAAATCTTTTCCCAATACGCTTTGTG
TATCTGCCATGAGAACAAAAATGTAAAACTAACGCATTGCATAGTTTGTTTTCACCAATC
TTTTTTCCTCAAAGCTGTCTAATTTTCTGCCTCTCTCCAGACGTGTGGTGGATGACAGCT
CAACAGGCTCAGAGAGGTCAGTTTTACCGTTATGTATGACAAACAGGGAGGGTGTCAACA
GGCAGATTGAAGCCTCATCAATGCTCCTTCTGGAATATATATATAGATTTCTCATTTTCC
ACCCAGAATTTCTACCAATTCCTGACAAATATGGCATCTTAGCCAGAAAATCCTAATCCT
TGTCTCTCTTTTTGCAGGTCAAAGCTTTTGTGACTCAGGACATTCCACTTTAGTATCCTT
AAATTCTGTTCTCTAGTTCAGAATTGGGTTATGTTTTTTGAAAACCTTGACCCCCTATTT
CAGCCATAACTTGGTGATGAAGCACATTCCTGGGGCTGATCCTGAGCTTGTCCTCCTCAG
TCACTATTATGATGAACTTGATGTGAGTATAACATCCATGCTTTTGTTTAGTTTCTCTTT
TGTTTTGTATTTCAGTAAAATTATAAATATATTTCTTTTTTGCAGTATTTCTTTTTGTGT
TATTGTTAACTAAAAATCACTCATCATCAGTAGAGTGGAAGTTGCATATAGATGTGTATT
TTGCTTCATTTCATGCAATGAGACTTTCATTTGGCCAACTTTTTGGAATGCACTGAAACT
TGGTGTGGGTTAAAAAAAATAACAGAAATATTCAGAGATTCATAAAGATATCAGTATGGA
CCAATGTTTCCCTAAAAGAAAGGCAAGATTGGGTAAGGGACCAAAATTATAACGTTTTTT
TAAATCCAAATGTCAAAAAGGGAAGCTTACATTTTTTAATACACCTTAAATGGAACTACC
GGTACTTTAAATTATCGTCAAAAATAGGCTATTTATTAGACACAAAAAATTAAAATATCA
TACATATTTTTTACAGACCTGAAGAAATCAGACAACTGTGGGCTACTTTTTAATCTGTTG
AAAATGGCTTATATTATGCTATGATTTGAAAATAATACAGCACCCTATTGTCTATGCAAA
AGATGTTTTTAAACATCATCTCTTCTTACAGAGGATTGCCCTTTCTCACATGACCCGCAC
TGAGATTAATGAGCTTTTGGTGAAACTGGGGTTTTATAAGAAGGAGAAACAAGAGGATGA
GGTGCCAGAGGAGTTCCGCTTCTCCCCCGCCAAAGACAGCCCGTTTAAAGATGAGCCCCA
GCACAAAGCATCCACCTCTGAGGGAAACGCAGAGGCCGAGCACACCGACCTATAACCTGC
AAGAGCAAGACCACCCATAGCTGCTGACAAATGTTTGTAATTCTTCATAAGACCGGGAGA
AAGCTCTGGGAAATGTTAGACACATGTGACGACCCGTTATAGGCCCACTCTTAATGAGCA
CCTAGTTTTCATTGTACATTTATGGGTCGTATCAGGTTATTTTGTGGGTGATTTTCTACT
GTCCAAACAGAAATTTCAAGTTTGTGTGAAATCATTTCCATGATCTTTTCCTCTTTTTGT
GAGTCTGTGTTTCCTTCTTTCCTGCTGGGGAACTGAATGAAGCTTCAGGCTGAAAATCTT
CTGACTGGCCTAAGGCTGATGCTATTTGTTCTTGTG
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