SelenoDB
Release 2.0
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Transcript Report for SPT00001976_2.0
Identity
TranscriptSelenoprotein M (SelM)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001976
Transcript release2.0
External IDNone
Gene SPG00001882_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001976_2.0 # Transcript # Selenoprotein M (SelM) # Medaka (Oryzias latipes) # Full length # Reverse
CACAAGAACAAATAGCATCAGCCTTAGGCCAGTCAGAAGATTTTCAGCCTGAAGCTTCAT
TCAGTTCCCCAGCAGGAAAGAAGGAAACACAGACTCACAAAAAGAGGAAAAGATCATGGA
AATGATTTCACACAAACTTGAAATTTCTGTTTGGACAGTAGAAAATCACCCACAAAATAA
CCTGATACGACCCATAAATGTACAATGAAAACTAGGTGCTCATTAAGAGTGGGCCTATAA
CGGGTCGTCACATGTGTCTAACATTTCCCAGAGCTTTCTCCCGGTCTTATGAAGAATTAC
AAACATTTGTCAGCAGCTATGGGTGGTCTTGCTCTTGCAGGTTATAGGTCGGTGTGCTCG
GCCTCTGCGTTTCCCTCAGAGGTGGATGCTTTGTGCTGGGGCTCATCTTTAAACGGGCTG
TCTTTGGCGGGGGAGAAGCGGAACTCCTCTGGCACCTCATCCTCTTGTTTCTCCTTCTTA
TAAAACCCCAGTTTCACCAAAAGCTCATTAATCTCAGTGCGGGTCATGTGAGAAAGGGCA
ATCCTCTGTAAGAAGAGATGATGTTTAAAAACATCTTTTGCATAGACAATAGGGTGCTGT
ATTATTTTCAAATCATAGCATAATATAAGCCATTTTCAACAGATTAAAAAGTAGCCCACA
GTTGTCTGATTTCTTCAGGTCTGTAAAAAATATGTATGATATTTTAATTTTTTGTGTCTA
ATAAATAGCCTATTTTTGACGATAATTTAAAGTACCGGTAGTTCCATTTAAGGTGTATTA
AAAAATGTAAGCTTCCCTTTTTGACATTTGGATTTAAAAAAACGTTATAATTTTGGTCCC
TTACCCAATCTTGCCTTTCTTTTAGGGAAACATTGGTCCATACTGATATCTTTATGAATC
TCTGAATATTTCTGTTATTTTTTTTAACCCACACCAAGTTTCAGTGCATTCCAAAAAGTT
GGCCAAATGAAAGTCTCATTGCATGAAATGAAGCAAAATACACATCTATATGCAACTTCC
ACTCTACTGATGATGAGTGATTTTTAGTTAACAATAACACAAAAAGAAATACTGCAAAAA
AGAAATATATTTATAATTTTACTGAAATACAAAACAAAAGAGAAACTAAACAAAAGCATG
GATGTTATACTCACATCAAGTTCATCATAATAGTGACTGAGGAGGACAAGCTCAGGATCA
GCCCCAGGAATGTGCTTCATCACCAAGTTATGGCTGAAATAGGGGGTCAAGGTTTTCAAA
AAACATAACCCAATTCTGAACTAGAGAACAGAATTTAAGGATACTAAAGTGGAATGTCCT
GAGTCACAAAAGCTTTGACCTGCAAAAAGAGAGACAAGGATTAGGATTTTCTGGCTAAGA
TGCCATATTTGTCAGGAATTGGTAGAAATTCTGGGTGGAAAATGAGAAATCTATATATAT
ATTCCAGAAGGAGCATTGATGAGGCTTCAATCTGCCTGTTGACACCCTCCCTGTTTGTCA
TACATAACGGTAAAACTGACCTCTCTGAGCCTGTTGAGCTGTCATCCACCACACGTCTGG
AGAGAGGCAGAAAATTAGACAGCTTTGAGGAAAAAAGATTGGTGAAAACAAACTATGCAA
TGCGTTAGTTTTACATTTTTGTTCTCATGGCAGATACACAAAGCGTATTGGGAAAAGATT
TAAGTTATGTTTTGTTTTTGTGCACATTTTACTTATATTTTTGTTCAAAGTAATCCCTGT
TTCCCTCAAAAATCTATGAAAAAGATTCAAAACTTGTTATTGTGGAGGAATCTCCCTGCA
AATAGGTTTCTAGCACAACAGCATCTCAAGCAAGCTAATACTTTTTGTCAGTTTGGTTTG
ATTTTACCACCCAGGGGTAAGTAGGCTACACAAATACAAAAGCTTTTGTGCTTCACCTGC
ACAACCTGATCTCTCTATTATAGAATATGTTTACAATAATCAGATTTTTTTACAGTTATG
AGATGAATTACAGTGAATTACGGAATGATTAACATCAGTAACAGTTATGATCATTATGAG
AAATCCTTGATTTTATCATTTTATTAAAAATGTACCAAGTCCTCCAGAGCCCCTTACGCA
TGCGCACAACACTTAAATTTTGTAGGTCGAAAAAAAGAGCCCCTTTCAGACAATTTGTCG
GCCCTAAGGTATGATTGTTATAAACTCGAAATAAACCATGATCAGAGGATGAAGAAAGCT
CCATACCTCCACCCGCGCTCGCGCCAGCCCCTCCAGCTTCTTCACGTCGATATCATAACC
GGAGGCGCAATGAAGAACGGCGGCCAGCGCGATCAG
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