SelenoDB
Release 2.0
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Transcript Report for SPT00001978_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001978
Transcript release2.0
External IDNone
Gene SPG00001884_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001978_2.0 # Transcript # Selenoprotein O (SelO) # Medaka (Oryzias latipes) # Full length # Reverse
TTATGAAGATCATGTGACGCAGATTTCCTGCGCCCAGGATGGGGGCTTGCTGTCGTAGGG
AACAGGGTTTCTTCCCATTGAGGAAGGCTCCTCTTGCTGCTCCTCTTCATCCCTTTCTGC
CTGAGCGGCGGCCCCACCTCCGTGCACCCACGCAGGCAGCTCCAGACCCGGCTGAGAGGA
GAACGGTTTCTCCAGAACCCTGAGGACCCTTTGGACCTGCAGGAGAAGAGAAGAGCTGAA
ATGTTCACATGAGGGTTTGGCATCAGATCACGTCACATTTCAACAAGCTACGCACTCTGA
CCTCAGAGAAATCTCCTTTTTCTGCAGCCTCTATTGCATTCTGGGCAATGTAGTTCCTGA
GCACCACGCGGGGGTTGGTGCCGTCCATCACCCTCGCTCTCTCCTCCTGGACTGCCTGCT
CATCGCTCTGACCCTCCAGCTCCAGAGCCAGACGTTTCCTGTGGTTGTGATGAAACCCTC
AACAGTCAGGATTGGACTTCCACCCCCCCCACACCTCCACCCCCCAGGATCGAACCGTCT
CACCTGTAGAGTCGGATCCAGGAGGTCCACTCCTCCGCCTGCTGGCTCCTCAGCTGCTCC
TGGCTGGTCTCCATCAGCTCCTTCAGCCTGCCGAGTTTCTCCAGCTGCCGCGCGATGGTC
GCCCTGTCAGAGATCATCTGGAAGAGCGCCGGGTTGCTCTGAGCCATGGAGAGCAGCATC
GCCAGCTCGCTGTCCGCAGAAAAACACGGTTCAGTTCTGGCTCTGAGCTACACACGCTGG
GACAATCGCATTTACAGGTGCTTCATCCAATACGTCGATCACCAAGGAAGTGATCATTAA
AAGTAAATGAAATATAGATCCGCTTCTGAAAATATCTGTCAACCAATCGTCCTCCTTCCA
GTGAGGCGCGTCACTTAATTGACATGCAGAAATGCCAATCAAACATCCTCTAACCGTGGA
TGGAGCGGCGAATGTGCCTCATTTTTTCTGGACTGGCCTGAGGTCAGTCATTTAAAACAG
AACGCACAGTGTTGCCATGGCAACTATAAACACACCAGTCCGATTTAAAGACTCTGATGA
AAACTGTGTTTTTTGGTGTTTTCAAAAGCATTCATCTGATGATGGAGGAGACATAAAGAA
AATTAAGCTTAAAACGGCATTTCTGAGAATTTCTTTATTCAAATCGCCGTAAATCAGGAG
CAAATGAGAAAAATGTCGTTTGTAAAAGATGGCATTGTGACGTATAGACAATAAGCTGGG
CGGGGCCAGAAGCTCTGCTCCACTCTGCAATGGGGAGGGAAAAAGGGGGGCGGGGTTGCT
CCGCGCTTACAGTCCTACCCAGAACTCAGAGGTGAATTTATGATAAACTCCTGCCGCTCT
GCAGAAACAATGTCCTAGAAAACTACACAGGTTTTTAGATTTTGGATAAAAACGTCATCG
TCGTAACTAGTAAATAAATAGGAACACCTCAGAGGAGGGAAACTTTAAGATGCTGTCCAC
AGAAAAATGGGAAACAATTTTATCATGTTGTAATCTTACATAGTCATCTAAATTGATCAA
TCTAATTAAAAATGTTATTCTGATTTATTTTAAAATCAGCTTTTCATAATAAACAATAAT
AAATGGGCTATGTAATGTTGGAGTAAGGATTAGGCTGCATCAAATCAACTAGTCTCCTGA
AAACCTGAAAAAATCCACCCAAAACGAGAATCCCCAGAGCCCCGCCCCTTTATATCTGTT
GTCATAAAAAGCTCCAAATATCCTCTGTAGAAACCAAAAGGACTTCATTTAGTAGCCTGC
AGTAGTTGGCAGATATTCAGGTTGAGAAATGTCCTTTACTGAAGACAAATGTGCATCGTT
GGTAGGAGGATGTCAACATGTAACTAGTGCCACCTGGAGGTGACTGTTGAAACTACAGGT
AACCTGTTATCCAATCAGCATCTGCAGCTTTTACTATGAAAAGATCAATTTTGTGAAATA
ATAAAAAAAATAAATCTTTTTTAAATGTCCTTTTCTTGTTTGTAATGTATTAGATTGTAA
ACATAACAGGTAACTTTTTAACGAGCAGAATAAGTGTTTTTATGCCCAGAGGCTCCGTTT
GACTCACCGTGGATCCATAGTGGGTTTGTTGGCAGCTTTGAGCTCCTCCAAGGAGGAGCA
CTGCTCTAGAAGGAGGTCCGTGGCTCTTCTGACAGCCTCCTCCTCATCTTCACCCTCAGC
GGGACACGAGATCCGACTTAAGCTGCGGAAGGTGTTGGTGAAGTCTGCGCCTGCAGGAAA
AGGAAAGCTGAGCCGCAGAACGCTGCAGGACAGCCATGCGGCGCCGACACCTCACCTGTG
TTGTGCATCGCCTGCAGCAGCTCTGTGATCAGCATGGCGTCCTCAGGCTCCTCTTTCTTC
AGCAGGCCCAGCTTCTTCCTCATGTTTGCCAGGTAGAAGCTGTTAAAGGCGTCCAGGTAC
TCGTCCATGACGGCTTCGGCCCGGTCAGGAGGTACCTCTGGAGCGAGGGCCTCTGCCAGC
TTCACCAGGTTCCACCTGCAGATGGCCGGCTGCGCCTGGTAGGAGTACCGCCCGGAGCTG
TCGGACGCGTTGCAAATGAAATTTGGATCGAACCTGAGAAGAAGACAAAAGTGTTTTCTG
ACGGCAGCTTCTGAAAGCTTCCAAACACGGGATGCAGCCGACCTGTCCATGAAGCCGAAG
GGGCCGTAGTCCAGCGTGAGTCCCAGGATGCTCATGTTGTCCGTGTTCAGGACGCCGTGG
CAGAAGCCCACGCACTGCCACTGGGCCACCAGCCGGGCCGTGCGGCGCATCACCTGCAGG
CAGGACCAGCGCAGCGTCAGCCTCACTCTGAAACCCTCAGAGGGTCCTCCGCACTCTGAA
CACACCTCTCTGAAGAAAGCCACGTTCCGCTCCACGCGGTCGCCGTGGTTCTGCTGGATC
TCGGGGTAGAACGTCCCGATGACATAATCCATCATCTGACCTCGGATCTCCTCGTGGCCG
TAGCTGGGACCCTGCCGGCCCGTGAACTCGTCAGCGGGCTTGAAGATCTCAAAAGAGCCA
AACCTTTCCGAACGAGAAGCGATAAGAGAACTCTGAAGATCTCAGGAGGAAGGTGGAACC
GCCCACACTCACCTGAGGAAGGTAGGCGCGATGCGGAGGACCACCGAGCATCGCTCGTGG
CGGGGGCGCCCGCTGTAGAACACGTCCCGGACCACCCTGCTGTCGGAGGTCACCACGGAT
CCGGCTCTGGTGGTGGGAACACCCAGGAAGAACATGGCCTCGCTGCACAGGAACTCTCTG
ATGCTGGAGCGCAACACCTTCCTGCCGTCCGCCTGTCTGGGAAGGAGAAGGAGGAAAAGT
GACGTCACGGACGTACCCTGATTTCTGTTTTTGTTCCACAGAAAACAGTCAGTTTGATCT
TTTTCTTATTTAAAGGTTACTTCCATTCTACAGGACCGGGTTACCTGGAGTAGGGGGTCA
GTCCCGCCCCCTTCACCTGGATCTCCCAGCGCCCGCTCGGGTTTTCGCGGAGCATCTCGG
GATCTTGGCCCGGAGGCGCCCTCACCTCTCCCAGGTAACATGCCGCTCCGTCTCCCAGCT
GCCCGGCGAACTGCCCGAACTGGTGGCCGCAGTAGCAGTGAGCCGCGGGTTCGGATCCGG
GCATGACCCGAGACCCGCTCAGGTAATCCGGACCGAGGGGGTCGCTCAGGACCTCCCGTC
CGCGGAGCCCCAGCAACGAGAGGGCTTCCCCTGAGACCGCCACGAAGCGCGGGTTGGTCA
GCGGCTGAGGCTTCACCCGGGAGAAACAGGCTCCTCTGACCTGCCGGACGCCGGACTCCT
CGGACGGATCCACCGGAAGCTTCTTCAGGACGACGTTTTCAAAGTTGAGTCGCTCCAACG
GAGACTGGCTGGCGGCGGAACCCATGCCGTCCATGCCGAGGAGTCTGACGGAGGACACGA
GAGGAGAAAACCCGCGTGACTGTCCCAGCCGACGTCCTAGATAAGCCAT
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