SelenoDB
Release 2.0
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Transcript Report for SPT00001982_2.0
Identity
TranscriptSelenoprotein R (SelR)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001982
Transcript release2.0
External IDNone
Gene SPG00001888_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001982_2.0 # Transcript # Selenoprotein R  (SelR) # Medaka (Oryzias latipes) # Full length # Forward
TTTCCTGCAGGCATATATGTGTGCTCCAATTGCAACCATCCTCTGTTCTCCAGTCGGTCC
AAGTTTGCCCACTCGTCTCCTTGGCCGGCCTTCACCGACACGCTCAGGGAGGACAGCGTC
ACCAAACTGATGGAGACTCTCACCGCCTTCAAGGTCTGCAGCCGTCTGGTCCGTTTCTCT
GTCGGAGGTTTGGTGGTAAACCTAAAATCTGCTGTCTGGAACCTCGCAGGTCCTGTGTGG
GAAGTGTGGCAGCGGACTGGGTCACGAGTTCGTCAATGACGGTCCGGTGGAGGGAAAGTC
ACGCTTTTGAATATTCAGCCACTCGCTAAAGTTCGTCCCCAATAAAGGTGGGATAGCATT
TAGCTGTAAAACACTCCTAAACTCGTAAAATAATTTCATTTTCATGCTCGTTTGTTGAAC
ATTTACGATCACGCTATCGCCTGCCGACATCTGTCAAGTTTGCTTAATAGTCCTGTTTAA
GAAGAGGACTGAACTGGACTAAAACCTTTAGGATCTAACTTTAAGTTGCATTAAATCTGC
ATTTCTTTACCCTTTTTTCATGTGTTTATCGTCTGTTTCTTTCCCCCTTTTCTCCAGATA
AAGACAAACAGTAAAGAGCGAGATGGAAGCATCCAGAACGTGTCCCAGTGAGGGGGACAG
GTCAGCGGGTGACGTGGACGGGGGGAAAGGCCTGAGAAGGACGCCCTGACCACTGAAGAA
TCTTTGACCAGGA
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