SelenoDB
Release 2.0
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Transcript Report for SPT00001983_2.0
Identity
TranscriptMethionine-R-sufoxide reductase 1 (SelR1)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001983
Transcript release2.0
External IDNone
Gene SPG00001889_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001983_2.0 # Transcript # Methionine-R-sufoxide reductase 1 (SelR1) # Medaka (Oryzias latipes) # Full length # Forward
ATGTCGTTCTGTTCTTTCTTCGGTGGAGAGGTCTTTAAAGACCACTTTAAACCAGGTAAT
TTAACTTTTTCACAAAGTAAACCGAAAACGTTTTGTTTTTGTTATTAATGGGCAATCTAG
CAACTGTGTTTTTAGTCACGTACTTAACTTAAATTTAAGTACGTACAGAGTAGACTTTTC
TTAACCTATTTTGGGACCAAAAAACCTCAACACGGAGTAATAGTAAGTTTGACAACATCG
AATTTTTATTTTTTTGATCCAAACGCCCTTAAAGGTACAAGCGAGATAATTTTGTAACAG
TGGGGGTCAGGTTACCAAACAGAAACGTTATAAAACGCACGAGTTTACACAATGGAGAAG
TAAACACTCAGTTCAACAAGTGTAGCAACAAATCGAACAGAATGGAATTAAACCTTGTGA
AATTATGCACAAAAACAAATGACCAGGTTTATCTTAACAATATCATGTTCTTCAGGCTAA
CTCAATGTTTCTCTGCTCATATAAGTGGATTCTTCAAAGTGAATGAACTGCATGTTATGT
GAGCAGATGCAAAATTCAAAGGCTTTGTTTTCATTTTAGTGACCATCTTGTTGGGGGTCT
TGATGTTTCTTAGAGGTGGGGAGTGCTCTGTTGCTCCTCTTTTTCTTAGCTTTCACCAAA
GTCCAGCTGGGATAACTGCAGATCTTTTACTAAATGTGTTGCATTATAAACCAATAATGC
TCCCTATTATTCACGTGTTTCATTCCAAAACGTCCACCACTGTACCTCTTGTTGTTCTAT
GCTGAACCATCTCTTTCTCTTAGGGATCTATGTGTGCTCCAAGTGTGAACATCAACTGTT
CTCCAGCCGCTCCAAGTACGAGCACTCGTCCCCATGGCCAGCTTTTACCGAGACCATCCA
CGATGACAGCATTTCCAAACACGAGGAAAGACCAGGCGCATACAAGGTGCCTTTAAAAAC
ATCTATTTAAGCTCCTTGTTGGTTATGAGGTTATGTGTATTTTGACATTTAGGAACACCA
TTTAAACTGGAAGTACCTTCTGATTGACTTGTATTAGCAGCAAACGTCTGTTGTCTTGTT
CTAGGTGCGCTGCGGGAAATGTGGAAACGGACTGGGTCACGAATTTGTAAATGACGGGCC
ATCCAAAGGGCTGTCCCGCTTCTGAATATTCAGCAGTTCACTGAAGTTCATCCCCAAAGG
TACAGTCTGGTTACAGTGCTGAAACTGTAGCGAAATGAAAATGTCTTTGAATGCCTGGAA
AGAACCTCTCAAAAATGTACTTATCCGGTCTGTGTTTTCTTAGTGATCTTCGGGGTTTCA
TCAAATTATTGTTTTCAAAGTTGTGTAACTGCTGTCAAATTCATTCTGCAGATAAGGTGG
ATGGACAGTAAGTGAGCTGTCATTAAGGAATGCGGCAGGTCTGGAAGTTTCCCTGTGCCG
CTGAAGGTGTGGACAGCGAATGAAGTGTTCTGGGACAAAGCCCGGTCCGGGAGCACCAGA
GCTCTGATGAATCCTGACTTCACTGGACAGCAAGGATTACAGGACTTCTATCTGTTTTTT
GCACTTGTTTGCTATGCAATCACAAATGATGTAGCAACTAGTTTTGTCTCATTAAGCAAA
CCTCTGCTTCTGGTAAAGATAACCTTTTAGGATTTTGAGAGCTCGTTCTGAGTGACAGAT
CCCTTATTTGACCATATTATCTGTATGTGGCTGCCTGAATATAAAAACATATCCAGCAGG
ACTGAAATGTGAAAAGTTTGATGATCCATTTTTTTTCACTGAATGATGCTCAAAAATAAA
CATATTTTAAAATACATTTCCATCTGGATACTTTCTTACCTTTTTGTGCCACTCATTGCT
TTCTGAAGTCAGAACAGTTCCTAAGTTCTGCCACTAGGTGGACCTTGGGCCAGAAGGATC
AGGTGTTACACCAGCTGTTGACACTGATCTACCGTTTTCCACGTCAAGCCGAGTTACTGT
TTGCTAGTCTTTGCTTAATACGTAACAGAAAATTATTCATAATTGTCAAACTTTTTGGCT
TGAATCTGACATGGAGGAAATGTCTTATTGCCCCTTTTCTGGTGGAGAATATTATAAGAA
TCACTTCCAGCCAGGTGAGTGTCATGGAAGAGACGTGAAGTATAGAGATCCTGGTTCCAG
AGTAGAGAGTGGCTTTGGTTTTTGCTCCCCTCAGGTATATACGTGTGTGCTGAATGCGGC
CACGAGTTGTTTTCCAGCATTTCAAAGTTTGAGCATTCTTCCCCATGGCCTGCCTTCTCG
GAGACCCTCCATGAGGACAGTGTGACCAAACATCCTGAAGCATGGGGACCTATAAAGGTA
GAATTACTGCAGCAAATGGGGCTCCAGGTAGAATAAATGAGGTTTAAATTATGTTGATTT
TTAAAAATGTATTTTTGTTTTTATAAGGTTTGCTGTGGAAAATGTGGCAATGCACTGGGC
CACGAGTTTTTATATGATGGACCCAAAGAAGGTCTGTCCCGATTCTGAATCTTCAGCAGC
TCACTGACCTTCATATCGAAAGGTGAGTGTCATCTCTTATCCACAATCTTCCTCTGCAGT
GCACTACAACTGACATTTGTTGATGTTATTCTTTTTTTTAACACTAGTTTTTTTAAAATT
CTCAATTAACTATTTCCTTTTCTTTCTCAGGTTAGAGGGATGTAAGAAAAAAAGAGATTG
ATTTATTTCTGCTGCTAAAGGCGTCCACAATGGATGAAGGGCTTTGTGAAAAATTCCAAA
TGGAAGTCCAAAGCCCTGATGTAACACAACTTTGCTGG
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