SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00001986_2.0
Identity
TranscriptSelenoprotein S (SelS)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001986
Transcript release2.0
External IDNone
Gene SPG00001892_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001986_2.0 # Transcript # Selenoprotein S (SelS) # Medaka (Oryzias latipes) # Full length # Forward
AGAGTGGAAGCTTTGGAAGCAGCCAGGAGGAGAATGCAGGAGGAGCTGGACTCCAGAGCG
GCTCAGTACAGAGAGAAGATGAGACAGGTGAGTGAGGGGGAGCGGGTGAGTGAGGGGAAA
GGTGAGGGGGAGCAAGCTCACCTACCTGCGTGTGTCTCCTGAAACAGCAAGAAGAACAGA
AGAGGAGACAGAAGATTGAATCGTGGGAGAACATGCAGACGGGGAGGAGCTGCAGAGAAA
CTAGGAGCTCTCAGGTAAATCCACCTGCATCTTTATCGTCCGGTTTTTACCTGTGAGACA
CGACCTGCAGTGTTTAAGAACCAAAAACTGACAAACCATCTTTGGAGCAGCTCCACCATC
AGGTTAGGTTCTCCTGAGTTTGTCCTTCATGGACCAATTTATGAGACTCTAGGACGTCTT
CACGCCAACATGGCGGTCCACTTCACACACTTCAACATCTCACCTGAGTGTCTCACCTGC
AGGCCAGTGAAGAGACCGGCCCTTCATCTGTCCCCAAACCCAAGAAGGATAAGAAGTCGC
TACGCAGTGCAGGTACGTACCGTACAGGTAACCAGCTTCCATCCTTCTGCTGAGGGTTTG
GCTGGTTCAATGACCTTTGACCTCAAATCGGGTTAGGGGTCTTTGTGGATCTGCAGACGT
TCAACCTGCCATCTGCTCATAGATAGGAACCAGTCCAGTACACTTCTACCCCATTTAGAT
GCCCCGGTGGGTCCAGTTCTCTGATATAATCTTCTAGGGGGCGGCCGTGGTGCAGCGGTA
GGGCGGTCGACCCATGATCGTAAGATTGCAGGTTCGATTCCCGCCTTGCACGCCCATGAG
TCGAAGTGTCCTTGGGCAAGACACTGAACCCCACCTTGCCTCTGGTGGTAGGCGGGCGCC
TGTGTTTGGCAGCGGAGCCGCCATCAGTGTGTGACTGTGTGTGACTGGGTGAATGGGTCT
GTGACTGTAAAGCGCTTTGTCCTTGTAGGAAGAAAGGCGCTATATAAGTATACGCCATTT
ACCATTTACCTGAAGCTGAATTCCTCGCCACGCTTCCTCCTCCTCTTCCTCACAAGGAAG
CTGCTGGATGAAGAGGGAACTCCTCATCCTCCTTCCTTTCCTTCTGCTGCCATCAAAGAA
TTAGCTGGAAGAACCATTTGGACATTTATAATTTAGGGTTAGAACATCTAAAATTTAAGA
ATTTGTGTGATTATTCAAGTTTGGCCTGTAACCTAATAATAATTGATTAACCTAATAATT
GCTGTGAAAAAGCATTTTCATTTAAATGTGTGGCATTGTGTTGCAGTAAAAGATCAAAAT
TCCACTGAAAAAGTAGCTTTATGAATTTTTTTTATTACAACAAACTTTTACCTTTACACT
GGGATTATTTTCATTGTGGAACAATTAGGAACAAAAAGGGAAGAAAGCTGTGCTCCTATT
TAACACAGAAAACAGTTTGAATATTTTTTTCAGCCATCCCAAAAATATTGACCACAAACC
TCTTTAAATACCGAAATACTGCTGATTCCCCAGTTTAGTGTCCGATGCCCTCAGGCCTCC
CCCTCGTCTGGCGTTGTTTGGGTTAGTCCTGTTCTAACTACAAAGTCGCACATTGATGAC
GTCACAGCAGCAACGCGTGCCGTGTACGCTGACCACAACAATAGTTACAGATTAAAGATG
ACATCAACGTGAGAATGAAAATCATTTGTAATCAACAGGATGAATGTACACCCCCCCCCC
TAATATTTGGAATCAGTATTTCCAGTTCATTAGTTTCATGGACAGGTGTTCATGTCACCA
GGTGGGGGGAGGTGTGGGGGCAGATTATGACTGATCTTTCTGTTGGTTTTCAGATTACAG
CCCTCTGGGTGGCCAGGGGGGGGGCTCCTGCTCCTGGAGACCTGGGAGGAGGGGGCCATC
TTCAGGAGGATGAGGCTAGAGTCGGAGGACCTCTGTCCTCCAGACGTGCACGCCGACCGC
CCGGACCGAGCCGGATGCTGCATTCTGTGGAGCTGTGGGCGTGGTCACTGACATCATCGG
ACTCTGTGATCCTCAAAGTCTCCAGGCTTTTTATGAAGCCACTTCTGCCAAAGGTCCTGG
ACCAGCAGGAGTGTCTGATGGTCCGGGTTCGGGT
Chart Advanced