SelenoDB
Release 2.0
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Transcript Report for SPT00001987_2.0
Identity
TranscriptSelenoprotein T (SelT)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001987
Transcript release2.0
External IDNone
Gene SPG00001893_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001987_2.0 # Transcript # Selenoprotein T (SelT) # Medaka (Oryzias latipes) # Full length # Forward
AGTTCAGCAGGCTCCTCTGCTCCTCTGCTCCTCTGTGTCTGCAGCATCTCCTGAGGCTAC
AGCAAAGTCTTCCAGGAGTACTCCCAGGCCATCAGCCAGGTGTACCCGGGTGTCCGTATC
CAGGGAGACAACTACCCCCCCACCCCCATCAACAGGTGAGAGGCCTTGATCAGGGTGTTT
GCAAGGGGAAAGGACTCCATAAACGTTTTATGTAAATCAGACGGAGAAGAAAAGTCGGGT
AACCCCCAGGAAGCAGTCGAGAAAAATCTTTGCGTCTACATGGATGACTTGGTTCTTCAT
CGTCAACACAAAACTCTTTTTGATAAGGCTACTAAATGTCCTTTTTGGTGTCCAGAATCT
GCTTCAACATCTGCGATTGTTTGCTCGGTGGTTGGCGCTCTGGCCTCACAGCAACAGCGG
TCCCTTAAGGGGAGGGGTGTTACGACCCCTGGTAGTGTCTGCTTGGTAGTGTCCATAATT
TATCTCACCTTTGGTGTTTTTTTTGGTTAGTTTCCTTTCATTTTTATGTGTCACGCAATT
AAACGGCTGTGTGGCCGACTTTAACCCCGCCTGGTTATTATATTTTCTTTTCGTTACCTA
TTTTCTCCCTCCTCCCTGAAGAGGGGCGTAACAAGGAGCCGTGAACAGCGTCTGTCAGCT
GTTAGTGATGTGTCCAGAGAGGGTTCTGATCAGTGTCGTCCTCTCGCCTCCTCAGGGTTC
TTGGAAACCTGGTTTCCTACCTGAAGCTGCTCTCCATCCTCCTCATCGTCACTGGTCTAA
ACCCGTTTGGTCACATTGGACTGGACACCCCCAGCGTCTGGACCTGGAGTCAGGACAACA
AGGTGTGGAACCGCAGCTGTGTTGGCACTGCAGCCGTTGGCGCCACAGCTAACTGTCTGT
AACCTCCCCAGATCTTCTCCTGCCTGATGGTCTTCTTCCTCTGTAACATGATGGAGACCC
ACTTCCTGTCCACTGGAGCCTTTGAGGTGTCTCTGAACGGTGAGTTGTGATTGGCCCAAA
GCTTGAGGCAGGAGTCATGGCTCTAGCTTGTGATTGGTTGGAGATAGATCCAGGTAATCT
TGGTCAGGACTGAAGCTTCAGGAACAAGGAGTTTACAAAGAGCAGCCATTCACGAGTGAA
GAAAATTCACAGTCAGAAGGTGATGAAGAAGAAGACGCTGTGACGCCCCTGAAGGGAGCA
GCTGCTACCTTCAGGGGCGTCCGTGAAAGAACGTTAACGGATTCGTCCCGTTAAGCTCGG
TCGTGCAGGAACTCTCCTCCTGGAACTGTTTGTGTCCCTCAGACATTCCCGTGTGGTCCA
AGCTGCAGTCCGGCTATGTGCCCAACATCCAGGAGATGTTCCAGATCCTGGACACCCACC
TGAAGATGAACCAGGCCGAGCACACCGGCTTCTCCACCACTTAGAGCTACACCCACAGGT
GACACTCACGCTCTTCTTTGTGCATGAATGAATTTACTGAACACATCACAAAACAACACC
AGAACACTTACATAACATCACAAAATATGGCGGATACAAGTGGAAGGAATACCGCAATTT
AAAAGGAAGCAAAAAAAGTAGAGTACATAGCTAGAAGCACACTTGTACATGAACATACAC
GTAATCTTAACGAAAAAGGAAACCACAATTACAGAGTTTGATAGTGGTACAAATGCAGGG
GGGGTGCAACATTGAAATAACGGTCTCAGGTATTTGGATTATCATGAACTGTTATGGCTT
TTGGTGAATTGATGAACATTTGTGCTATCCTAGGCACTTTAACATTGGGAGTTGGGTCAT
CTAGACCCACTAGACAGAGCTCTGAGCCTTTTTTCTTCAATGATTTGTGATCTTCACTGG
TGTCCATGGATTACATGAAATCTTTCCACCTTTATCCACCTTTGTCATGGTAGGAAGAAC
ACGTCAATGTAAGGGTGGGGTCATACGATAGCACAAGGGTTAATCTTATGGATTTTAAGT
ATAAATTGACTTTGTTACTAAAGAAGGTCATGTTGGGGGGGGTGACAATTCTGTAATCTG
TTTTTTTGTGTATAAAAACATGGCTAAACATAACACAGTATTGATACATAAACTATTTAC
TTTGTTGTGTAGCGATAGGCCAAAAATTATGACTTCTTTGAAAAGAAGCTCATAATAGAC
AGGAATTATTATTTTTAATCCTTTTTAAACCTCCAACCAGAAAATGTATACAGCGTTACA
CACAAAAATGTGTCTTCAACAGGACAGTCTTACGGTGAGATCAGGAGGTTCACTCGGGGT
GGGACTGTAGAAACACTGGATCGTCGTGACAACGCCTGCTTGTTGTTGTTGACACACGCT
AACCGTCATGGACCTGCAGCAGGTGTCTGCACCTGTGAGGGCGCCGCCGCCGCCTTTGGT
CGTTTCAGAGGAATGCCGTCTCACTCCTTCTCTGAAGTTTCACACTACAAGATTCACATG
CTCCTGGAACCAGGGTTCGCTTCACCCTCCTTTTTTAAGCAGAGGAGGAGGAGCTTCAGT
CATACAGCCCTGTGATTGGCTGAGACCTAAAACCTCTTTGGGGTTAAGTCAGGATCAGCT
TAAGTGAATGGAAAAACCAGTTTAGATAGAAGAAAATGGAAAACAGTCTCGCCCACGAAA
ATAGACATTGTAAACTTGAAAAATGAAAACAGTAAATTTAATTAAAAACCTATAATCTTC
AAATTGTTACTAAATTACTGTAAGTTACTGGTGTTTTGTATTTTCAGCTTTTGATTTTTT
TTTTTTTGTTTCTCTTATTTGCTTTCAATCCTCTGTTTACAGTTACAGTTAAGAATTTTT
TATGGGGGTGGGGCTTTGAGCTCATTGGCTAGTGGGGACATGATTGACATCGGGTGACAA
AGGTTATGGTGATGTCACTTCCCTTCTCTGACACAGGCGGCGCCAGCAATAGACGCCGTT
CTGGAGGGGAAATTACATCACCGTGACCTCCATCGCCCCATGTGGGCTCTGATTGGCTCC
TGTGACACCGCAGTAGCCAATCATAGTCGTTCATCCTGTTGTTAACCTGCTCAATCCATC
TACAGTGACGTACCGCGTTAGCAGTATCCACAAACGGCAGTCAGTAGTAGTCAGATTACC
TCGTAACTTAAAATGTGACAGAGTAATTGCAGACGCTGCCATTCAGTAACTTTCAGCTGA
GACCTCAGTCTGACCCTGAACACCGGACCACGCTGACCCACTGACCTCTCTCCTGTGTGT
CCACAGCCGTGCGGCATTCAGGTGTCCTGGTTCAGGAGGACATTCGGTCTGTGGCGTTCA
TGAAGGTCTGGCCCTAAAGCAGACACTGAGGGGTCTCTCCTGATGTTCTCCTCGCCACAA
A
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