SelenoDB
Release 2.0
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Transcript Report for SPT00001987_2.0
Identity
TranscriptSelenoprotein T (SelT)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001987
Transcript release2.0
External IDNone
Gene SPG00001893_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001987_2.0 # Transcript # Selenoprotein T (SelT) # Medaka (Oryzias latipes) # Full length # Reverse
TTTGTGGCGAGGAGAACATCAGGAGAGACCCCTCAGTGTCTGCTTTAGGGCCAGACCTTC
ATGAACGCCACAGACCGAATGTCCTCCTGAACCAGGACACCTGAATGCCGCACGGCTGTG
GACACACAGGAGAGAGGTCAGTGGGTCAGCGTGGTCCGGTGTTCAGGGTCAGACTGAGGT
CTCAGCTGAAAGTTACTGAATGGCAGCGTCTGCAATTACTCTGTCACATTTTAAGTTACG
AGGTAATCTGACTACTACTGACTGCCGTTTGTGGATACTGCTAACGCGGTACGTCACTGT
AGATGGATTGAGCAGGTTAACAACAGGATGAACGACTATGATTGGCTACTGCGGTGTCAC
AGGAGCCAATCAGAGCCCACATGGGGCGATGGAGGTCACGGTGATGTAATTTCCCCTCCA
GAACGGCGTCTATTGCTGGCGCCGCCTGTGTCAGAGAAGGGAAGTGACATCACCATAACC
TTTGTCACCCGATGTCAATCATGTCCCCACTAGCCAATGAGCTCAAAGCCCCACCCCCAT
AAAAAATTCTTAACTGTAACTGTAAACAGAGGATTGAAAGCAAATAAGAGAAACAAAAAA
AAAAAAATCAAAAGCTGAAAATACAAAACACCAGTAACTTACAGTAATTTAGTAACAATT
TGAAGATTATAGGTTTTTAATTAAATTTACTGTTTTCATTTTTCAAGTTTACAATGTCTA
TTTTCGTGGGCGAGACTGTTTTCCATTTTCTTCTATCTAAACTGGTTTTTCCATTCACTT
AAGCTGATCCTGACTTAACCCCAAAGAGGTTTTAGGTCTCAGCCAATCACAGGGCTGTAT
GACTGAAGCTCCTCCTCCTCTGCTTAAAAAAGGAGGGTGAAGCGAACCCTGGTTCCAGGA
GCATGTGAATCTTGTAGTGTGAAACTTCAGAGAAGGAGTGAGACGGCATTCCTCTGAAAC
GACCAAAGGCGGCGGCGGCGCCCTCACAGGTGCAGACACCTGCTGCAGGTCCATGACGGT
TAGCGTGTGTCAACAACAACAAGCAGGCGTTGTCACGACGATCCAGTGTTTCTACAGTCC
CACCCCGAGTGAACCTCCTGATCTCACCGTAAGACTGTCCTGTTGAAGACACATTTTTGT
GTGTAACGCTGTATACATTTTCTGGTTGGAGGTTTAAAAAGGATTAAAAATAATAATTCC
TGTCTATTATGAGCTTCTTTTCAAAGAAGTCATAATTTTTGGCCTATCGCTACACAACAA
AGTAAATAGTTTATGTATCAATACTGTGTTATGTTTAGCCATGTTTTTATACACAAAAAA
ACAGATTACAGAATTGTCACCCCCCCCAACATGACCTTCTTTAGTAACAAAGTCAATTTA
TACTTAAAATCCATAAGATTAACCCTTGTGCTATCGTATGACCCCACCCTTACATTGACG
TGTTCTTCCTACCATGACAAAGGTGGATAAAGGTGGAAAGATTTCATGTAATCCATGGAC
ACCAGTGAAGATCACAAATCATTGAAGAAAAAAGGCTCAGAGCTCTGTCTAGTGGGTCTA
GATGACCCAACTCCCAATGTTAAAGTGCCTAGGATAGCACAAATGTTCATCAATTCACCA
AAAGCCATAACAGTTCATGATAATCCAAATACCTGAGACCGTTATTTCAATGTTGCACCC
CCCCTGCATTTGTACCACTATCAAACTCTGTAATTGTGGTTTCCTTTTTCGTTAAGATTA
CGTGTATGTTCATGTACAAGTGTGCTTCTAGCTATGTACTCTACTTTTTTTGCTTCCTTT
TAAATTGCGGTATTCCTTCCACTTGTATCCGCCATATTTTGTGATGTTATGTAAGTGTTC
TGGTGTTGTTTTGTGATGTGTTCAGTAAATTCATTCATGCACAAAGAAGAGCGTGAGTGT
CACCTGTGGGTGTAGCTCTAAGTGGTGGAGAAGCCGGTGTGCTCGGCCTGGTTCATCTTC
AGGTGGGTGTCCAGGATCTGGAACATCTCCTGGATGTTGGGCACATAGCCGGACTGCAGC
TTGGACCACACGGGAATGTCTGAGGGACACAAACAGTTCCAGGAGGAGAGTTCCTGCACG
ACCGAGCTTAACGGGACGAATCCGTTAACGTTCTTTCACGGACGCCCCTGAAGGTAGCAG
CTGCTCCCTTCAGGGGCGTCACAGCGTCTTCTTCTTCATCACCTTCTGACTGTGAATTTT
CTTCACTCGTGAATGGCTGCTCTTTGTAAACTCCTTGTTCCTGAAGCTTCAGTCCTGACC
AAGATTACCTGGATCTATCTCCAACCAATCACAAGCTAGAGCCATGACTCCTGCCTCAAG
CTTTGGGCCAATCACAACTCACCGTTCAGAGACACCTCAAAGGCTCCAGTGGACAGGAAG
TGGGTCTCCATCATGTTACAGAGGAAGAAGACCATCAGGCAGGAGAAGATCTGGGGAGGT
TACAGACAGTTAGCTGTGGCGCCAACGGCTGCAGTGCCAACACAGCTGCGGTTCCACACC
TTGTTGTCCTGACTCCAGGTCCAGACGCTGGGGGTGTCCAGTCCAATGTGACCAAACGGG
TTTAGACCAGTGACGATGAGGAGGATGGAGAGCAGCTTCAGGTAGGAAACCAGGTTTCCA
AGAACCCTGAGGAGGCGAGAGGACGACACTGATCAGAACCCTCTCTGGACACATCACTAA
CAGCTGACAGACGCTGTTCACGGCTCCTTGTTACGCCCCTCTTCAGGGAGGAGGGAGAAA
ATAGGTAACGAAAAGAAAATATAATAACCAGGCGGGGTTAAAGTCGGCCACACAGCCGTT
TAATTGCGTGACACATAAAAATGAAAGGAAACTAACCAAAAAAAACACCAAAGGTGAGAT
AAATTATGGACACTACCAAGCAGACACTACCAGGGGTCGTAACACCCCTCCCCTTAAGGG
ACCGCTGTTGCTGTGAGGCCAGAGCGCCAACCACCGAGCAAACAATCGCAGATGTTGAAG
CAGATTCTGGACACCAAAAAGGACATTTAGTAGCCTTATCAAAAAGAGTTTTGTGTTGAC
GATGAAGAACCAAGTCATCCATGTAGACGCAAAGATTTTTCTCGACTGCTTCCTGGGGGT
TACCCGACTTTTCTTCTCCGTCTGATTTACATAAAACGTTTATGGAGTCCTTTCCCCTTG
CAAACACCCTGATCAAGGCCTCTCACCTGTTGATGGGGGTGGGGGGGTAGTTGTCTCCCT
GGATACGGACACCCGGGTACACCTGGCTGATGGCCTGGGAGTACTCCTGGAAGACTTTGC
TGTAGCCTCAGGAGATGCTGCAGACACAGAGGAGCAGAGGAGCAGAGGAGCCTGCTGAAC
T
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