SelenoDB
Release 2.0
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Transcript Report for SPT00001991_2.0
Identity
TranscriptSelenoprotein U (SelU)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001991
Transcript release2.0
External IDNone
Gene SPG00001897_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001991_2.0 # Transcript # Selenoprotein U (SelU) # Medaka (Oryzias latipes) # Full length # Forward
TTGGGGATTGTTGGTGACGCTGTGGCCGCTGTCGGTGGCCTCATTGCTGGGGTTCTGAAC
TACATGACTGACATGTTTCTGTCAGCTCCCTTGAAAGCCACGCTCAACCATCTGGAGGAC
ACGGAGCTCAAAACCTTGACGGGCGGTAAGAAGTTTCTTCCCAGTGTGTAACTTTCAAAC
AATTCAAGCGCTTTAAGTTAAGTACCCCCCCCCCCCCTTTTTTTGTAGTAAAAAAAAGGG
AAATTTTGGGGATTNNNNNNNNNNCTTTTTTTTTGTAAAAAAAAGGGGAATTTTGTGGAT
TTTTTTTTTTTTTTTTAATGTATACCCTTCACCTTCTACCTGCAGAAATCAAGACTTTCA
AGGCCAAGTGTCTGTGGGAAAAGGCTGGAGCTGTCATCATGGCAGTACGCCGTCCTGGAT
GATTTTTGTGCAGAGAGGTAAACCGTAAACTCTGTTGTGCAGAAAGATACATTTAGGCTC
TTATTTTGAAAGTTATTTTTTTTTTTCTAACCTAATATAGTATAAGATTGAAAGTAATTT
CACAAAGTTTTTACTTTTTATCCACTGGGATCATTGCATGTTACAGATTGATACTTTTGT
TTTTTTAGGTTGCAATGTTCTGAACCCAAAACAAATAAGAGTTTTGCTTCTGTTGTCTTC
TCTTGCATCTAGGAGGCTGCTGAGCTGTCCTCTCTGAAACCCCAGCTTGACCAGCTGGGG
GTCTCTCTGTATGCTGTTGTGAAGGAGGATGTTGGCACTGAGGTCCAAAACTTCCGTCCA
TACTTCAAGGGAGAGATCTTCTTGGATGAAAAGGTTGTGTTTTTAAAAAGACTGGGGATG
CACTCTTTCAGACCAGATTCAGACTATTTCACTGCATTTTTAAACTTGAGCCCCTAAAAG
TCATGCATTCTCTTTTAAAAAAAACAAAAACAAATCTTCTTCGACTAATTTAATCGTTTT
GATTTGTTCAGAGACGCTTCTATGGGCCCCGTGAGCGGAAGATGGGGCTCTTGGCTTTTC
TGCGTATTGGAGTGTGGTTTAACGGCCTGAGGGCCTTCAGAAAAGGCTTCCTGGGAAACG
TCTTGGGAGAAGGCTTTGTTCTTGGAGGAGTTTTTGTTATTGGTCGGGATCCGCAGGTAA
AAACCTCTTTGATTTTTAAAAATTTCAGTCGTGGTGGGAAGCAAATTTGGGTTTTAAGTT
GTTTCTTTCTCTGCAGGGAATATTACTAGAGCACAGAGAGATGGAATTTGGAGACAAGGT
CAACATTTCAGACGTCCTCCACGCTGCGAGAAGAATAACACGAGACCTTTAGAAGGAAAC
ATGATGTATACTACAGTTAAAAAAGAATCCTGTTTTTTTTTTTTTTAATATTTGCCCCCA
GGGGGAATTGTANNNNNNNNNNTATTTGCACTCATGTGGTATTGTATTTGTGGATTCTGG
AATCCAGGGAGCATTTTTATGCCATTTGACAGGATCCTGTGTGTATTCATGAAAGGCTGT
CTTTAAACTCAATGGAAGAAGCAGACTGGATATTTAACACTCTGG
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