SelenoDB
Release 2.0
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Transcript Report for SPT00001993_2.0
Identity
TranscriptSelenoprotein U2 (SelU2)
SpeciesOryzias latipes (Medaka)
Transcript IDSPT00001993
Transcript release2.0
External IDNone
Gene SPG00001899_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00001993_2.0 # Transcript # Selenoprotein U2 (SelU2) # Medaka (Oryzias latipes) # Full length # Forward
ATGGCTGCAACTGTTCCACCAGTAACCCGACAAATAACCAAAGACAGCCACAGGAAAAAA
ACTGAAAACCCGCCTGTAGATCTGCAAGAGGCGCAAGACTGCTTGATCTACGACCGACAC
GGAGTCTCCATTCCGTTCAAGTCCTTATATCAAGACAGGAAAGTTATCATCGTTTTTGTT
CGGGTAGGAAAAAACTGTTGCTGTTCTTTCTTATTTTGTGAAAAACTCTTTCAGGCAGGC
TGGACATGAATTAGATTAGAAAACCTAACGATGCTCAGAACTTCTTATCCAGGACTGGAG
AAAAAAAAAACCTTATTGAAACCTTGGAGTCCTGCTTTTTTAATGTCATGTATTCCTGCA
GAACTTCTTATGCTACAGCTGCAAGGAGTATGTAGAAGATTTAAGTAAAATACCCCAAAA
AGCCCTGGAGGTGAGTCCCAGAGCTGCCATTTTTAAACCACTTTACGATCCTTAAATAAA
TATATTCAAAGGTATTACTACATTGTTGATGTCTTTCTAGGATGCTGCAGTCAAATTGGT
TGTGATTGGTCAGTCCTCCCATCACCACATAGAGGTAAAGTTGTATTATCATGCAAACAT
TTTATGAAGTGTTTATTTAAACAACGCATTAATCCACATTATATTGTCGGAATAAAACAA
AAAAAAATGTTTTTTGAAACAAACTTATTGTCAGAAACGTGTCAGTAACATTGACTGTAT
AAGAGACCTGGATTGAGTGGTCCCTCCCCCCTGGCGTTCCAAACAGGAAGTTCGCACTGG
CTCCAAGAAGCCAAACTCCCAGACTTCTATTAATAAATGAACAGCTGTTACTATGTCATA
TTTGTCAGAATAACCATTCTTGCTCTGCTACTTTTTAAAAAAATATATTCTTGCATCTGA
TTTGTTAAAAAAAAATCAAAGAATACTTTTATAACACAGATACCTGAACCAAGTTTTCAA
TCATCTTTCAGGGCAAAAATATTATTCATTTTTTGTTTTTACAAATCAGCAACTTTATTT
GATTGAATATTAATTCTCTGTCAAATGTTTGCGGCTGGTTTAAACTTGGACTGTCTCAAT
AAATCTGTATTTGGAGGAAAGCTCCTGGTTTTGTCTGTTAACAGCAGCTTTATTTTTCTT
TGAAGCCGAAGACCGTTATTCTGGTTCCTCACTGACACTTTTCTCCTCGAAGAAACTTTC
CAAATACGTTTAATTGTTTGGTTTCTATCAGCCTTTTAGCTTTGGGACTACTAACTTAGC
TGTCCAATAAGCTGCTTAAAATCACATGACGCGTCAAGACAGACGGATGTGGTGAACAGA
ATCCGGTGCTTTTCCAAAATAAAACTTCCGTCAGTATCAGAAAATAAACAGCCACAAAGA
ATCAAAGTTGGCGTATGTATTTATTTTTCTCCCTGCAGCCTGGTACCAAGTGACCCACGG
ACTGACACCACTGAAATTACATTTCACCGTTGGCATGAGTGTGTTGTTTTGCCCCCTAAA
CTCATGGAGATGATTCGTTGGGGACCCTGGGGGTTGGGGACCACTGTCTTAGATCACACA
AGCAGACTAACTGAACATACCTGGTAACATTTGTTTTGCTCTTTCACTTTCTAAATTTTT
ACATTCAAATTCTCCTCCCTACCACATCCTCACTGGGCATGTTCAAACACCTTTCAGGTT
TGTGTGATCAGATGGCACCGGGAGCCAAAAGAAAAAACACTCAGTTAATCAAATCAATAA
GAAGCAGATGAGTCACAAAAAGCCTTACCAGTTCATCCTGTTTACAGTAGCTGGTATGAC
CTGAAGCAGTTTCTTCTCTGCTCTCTGACGATTCTACCCTTGCTCTAGGCAAAATTGATT
GTTGTCATTGTAATGCAAAGTTATTCTTTCAATCATATCAATACTAACAGAAAACAAGGA
TACGATGAAACATGCAGTTTATCACCTTTTTTATCTTATCTGAATAAGCAGAAAGCACTA
AGTTTGATGCTTAGATGAGACACAAGAGGAGCTGAACAATGTAAACCACAACAGTTAAGG
TGACAAAACTTTATCATTTCCCTTGAACCATGTGCATACTGTTGTTTTCTTTCTTGCCAA
TTTAATATTGAAATAAGCATCAACCATGTGACATGTTGGTAAAATCCATGTTTGTTTGTT
TGTTTGTTTGTTTTGTCCTTCATCTAGCCGTTCTGTTTGCTGACTGGGTATTCTTATGAA
ATGTATGTAGATCCAGAAAGGTGCATTTATCAAAAGCTTGGTATGAAGAGAGAAGAGACG
TTCACAGAGTCTGGTAATGTGTGTGCATGTGTGTAACAGTGGATTTTTTTTTTTCTTATA
GCCTAATAAACTAAATCTTTTAAACATTTGTTTATTTGACTATTCAGCAAACCCCAGCCC
TCATGTGAAGTCCGGTTTGTTAATGGGACAGCTGAAGAGCATATGGAGGGCAATGACCAG
CCCTGCTTTTGACTTTCAGGGTGACATGTATCAGCAAGGGGGGGCTCTCATTGTAGGACC
GGGTGAGTCATCTCAATTCTTTAAGGCTCCAGGTCTAATATTTCTCTCTAATCATATTTT
ATTTTTCCTTTCAGGTTCCCAAGTTCACTTTTGTCACTTTGATATGAACCGTTTGGATCA
CATTCCCATCAATTGGCTCCTTCAGCTTGCTGAAGTTGGAGAAACTGTGGACTTTAGCAA
TAGGCCAAAAATCCTCCATGTTTAG
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