SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00002165_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesPetromyzon marinus (Lamprey)
Transcript IDSPT00002165
Transcript release2.0
External IDNone
Gene SPG00002072_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00002165_2.0 # Transcript # Selenoprotein O (SelO) # Lamprey (Petromyzon marinus) # Full length # Forward
CCACTCTGCAGGCACTCGGACGGCCGCAAGGTCCTGCGCTCGAGCCTGCGCGAGTTCCTG
TGCAGCGAGGCCATGCACCACTTGGGCGTGCCGACCACGCGCGCCGGCTCGTGCGTCACG
TCGCACTCCACGGTGCTCAGGGACGTCCACTACGATGGCAACGCCCGGCCCGAGCAGTGC
AGCGTGGTGCTGCGAATCGCGCCCTCCTTCCTCAGGCAAGACACCGCAGGGACACGGCCC
GACAGGGTGCTCACGATCCGGCAGACCGCCCCGGCCGCCGCAGCAATGCCTCGGCTAACG
AGGCCTCTGGGAACGAAGCTCCTTTATAACGATGTCGCCAATGGAGGGCCACTTGGCCCG
CCTTATTTTTGGCACGAACACAAAAAAAAAATTTTGCTGAATAAATATTCAGGAAATCAT
GCAAAGCGATTCAAAAGAATAAAATGTTTTTACTGTGCACGCATGTTGTAAACGCAACCG
AGTGGAGTTTGTTTACGTTATCAACGCCGATCAGCGAGGAGCTTCATGAGACTCCCTAAC
TTGGGTCACTCTTCCCGCTCCCTCCCGCCGTTGCTCAGGCTCCTCGTGTTGGTAAAAGTT
TATCGTGTTATTTTTTTTTTTACAGTGATAAAGTTATTTTATATCCCCCCCCCCCCATTA
CTTCATGCGTGTGAGTGGCCTTACTGGGCAAAAAGTTCAGCGAAAATGCACATCTTAAGG
AGGGTAGAGGCAGGAGAGATGAAAAGTGAAGTGGCGTGTTTGTTATGGTTAGCGCAGTCC
ACCTTAAAGACCACTTTAAACCTAGCAGACAAAGTGAAGGCTTGATTTGAAGCTTTCGTG
ACTGCAGGAATCCATACTCTTTGGTTCTTTCGGTAAAGTCACGTAGGTATAAAAAAAATA
ATTGATCACGACGTTTCGATCACAACACAAGCAATCGTCATCAGGTGGGACAACCACAGC
AGTTTTTTTACTGCTGTGGTTTGCACCACCTGATGACGATTGCTTGTGTTGCGATCGAAG
AGTCGTGATCTATTATTATTTTTCTACCTACGTGACTTTACCGAAATAACCAAAGAGGAA
AGTGAAGGCTGCTGTGCAGCAATGCTTTCCTCTCGTTTCCCCCTTACTCTGAAGTCCTGG
AAAGCATCCCTAGGCCTCCTCCGTTATATCCAACTCTGGTAACGGAAGTTTGCGGCAACG
CGGTGACGTCATGGAACGCATCTGCTGCGTCAACCGAGGTAGTACCGATATTTGCCTGTG
CACCACAGGCCAGAATCCTTTGTACGAAATCTATTGGCAGATGCCCCCCGATACCTTCCC
ATGTCCGTTTGTCCACGTAACAAAATAACAGTGTGTGCCCGCATCGCCTTCTGGAAGCGC
GTGTTTTTTTTCAGCAGCGTTGGTTCCATAGGAAGCAAACCCTGGACCAGTTTTGACATG
CAGTTGCTCATCAGCACAGTCAGGCTTGAGATCCATTGGTTCAGTACAAGCAAACTCTTG
GCAATGCTGGTGAACTTCCCATATTTTATGGGAGAGGACCCCTTCCTGTTAGATACGGTT
CTATTAAAAAAAAGATTTGAGACAATTTTTTATTTTCCCAGGTAAGGCCCCCACTGAGCT
GTATAGCTCTTTTTCAGAAGTGACCTGGCCACAAATGATAGCTCAACGAAGTGGCTTATC
GTGTGGAAATTTATAGCAGCCAAATAGTCTTAATGCATGTTTCTAAATGTGGAGTAAAAA
ACTGGAAGAGGACCCGGAGAAAAATCCACGCGACCACAACGAGAACATGCAAACTCAAAA
TAAGCAGGTGTCCGTCCGGGTCTGGATCGAACCCACAACCTCCTGTATACCAGGCGAGGG
ATTACATCTCACCACCGTGGTTCTATTCGACGTAAAACTCGACACCATGCAACAACACTG
TCGTGCGTTTTAGGTTTGGTTCGTTTGAGATCTTCAAATCGACGGATAAAGACACTGGGC
GCACGGGCCCCAGCGCCGGCCGCGAGGACATCAAGGTCACCATGCTCGACTACGTCATCG
ACACGTTTTACCCGGAGCTGCTCGAGGGCCACGGTGACGGCGCGAGCCATAAGTACACGG
CGTTCTTTAGAGAGGTGAGTGCGGGGCCTCTGATCGTACCGGTCACATTCGCGCACACAC
GCACACACACACACGTGTGCGTGCTCTACCTTGCCTCCCAGCAGCAGCCAAACTGGTTGG
CGTCGGCTTCTCTGCTTCCGCGCAGACTTCCTTAACACATTTGTTGAACGCAGAACCAAC
GGCCCGGAACATCGAGCGGCCAGCAACGAACAAGTGCACTGTCAGTTGTATTGGATAAAA
GGACGTACATTTGTTGAATCGAGTCAGATTATTATTTTTTAAGAGCTTGGGGAATAGAGA
CGATGGGAAGGAATTCCATAGTGGAGCAGTGCAGGCATACGGAGCAGAGAGAGAAGCGTT
GTGACCTGAGGCGTGGTGACTGAGTGATTTAGTGGGTGAGTGATTGGGTGGGTGAGTGAG
TGGGTGAGTGATTGAGTGGGTGAGTGATTGAGTGGGTGAGTGGGTGGGTGATTGAGTGGG
TGGGTGATTGAGTGGGTGAGTGGGTGGGTGATTGAGTGGGTGGGTGAGTGGGTGAGTGAT
TGAGTGGGTGAGTGATTGAGTGGGTGAGTGGGTGGGTGAGTGGGTGGGTGATTGAGTGGG
TGGGTGATTGAGTGGGTGGGTGAGTGGGTGAGTGATTGAGTGGGTGAGTGGGTGGGTGGG
TGATTGAGTGGGTGGGTGAATGACTTTTAGTGACCTGCAGCATGGTGGTGGTTGAACAGT
GGATGAGACGAAGAACTGAATCTGGTGGAGGAATCTTGAGTCATGAAGTTCATGGGAGCG
GTAACCATGGTAGTCGCGAAAGAAGAGCGATAACAATGTGACTGAGCGCCGGTGAGCAAG
TGACTGGAGTGAATCGGTCAGCGCTGGTTCAACAGAGGCACCCTTTTCTCCAGGGGGAGA
CAGTGGGCAGTCTTGCGTGACCTGCAGTTTCACGAGCAGCAGAATGTCTGCCATTCTTGT
GCTCTTTATACGGTTTTCCTGAGCATCATCCGGCATTGATGCCAGTGAATGTAAGAGAGC
TTTTCTGTAGGCCTTGTGATGCTTTTGGTTGCTAAGCTCAGGGATTTGGCTTTGCTAGGG
GGTAGGGAGTTCCTTTTGTGTGATGAGTTTTAGAGTTGAGAGGATATATACATACAGTAT
TATAATGTAAGACTCTCCACCACCCGACATATGCATATACATTAAATTTCCCCGTGTGCA
AGCATTTCACTTACCAATAATAATTTAACCTTGCTCAAAGATAAATTGAACAATTCCCAC
ATCCAAATGTATCCATTATATACGGCATTTATTGTTGTATCACTTGGGCGGCAGGGTGGT
GCAGTAGTAACATTCTCACCTCGCAGAAAGACTGGCCTGGGTTTAATTCCCGACTGGAGC
GCTTTTTTCTGTGCACGACCTCCCCCTGTTCTGCGTGGGTTTCATCCCATAGCTAATAAA
ACGATTCCAATGCAACCAGTATTGGCCAAAACATTTCAATGCTGAAAAATAACCTGAGAA
ATTATTCATTTGGGATGACAGAATTAGAATATTTATATTGGAGGAATCCGATGAGCTATA
AAGCTCTTTTTTTACAGATGACCATTAGGGGCAGGTCAGAACGTTACCGCAACAAACAAT
ACAAGACACGTTAGGAGTGCAAAGTGTAGGAAGGGTAAGAAATTAACAAAAACAATACAA
ATCCCAGTGAGCATTTATAGCAGCCAAACAATCTAAACGTATTTGTCTAAATGTGGAAAC
TTGGCAGGACCTTCCTGAAAATGAGTCTTGAGACCCAGGCAATCCTGGGTCATGATAAAA
ATGTCAAACAAGCAGTGTGGTGGTAGAGGAGACCGAGTGGTGGACAGCTCACCAGGGCGT
AAGTTCACCCCGTATATGCTTTGCGCAGGTTACTATGTATACGGAAATGGCCGATTCTGA
GAGTTGATGAGAGATGGATCTTAATGGTTGGTTGAGGATTCTCGGATCCAGGCGTGGGCT
TCCGGGTTGGGCTACGTGTCGGGAATTTATTCTTGTACTACTTCCTGTTGTATTTATTCT
TGTACTAACTTTATTTAGTTGAATTAGACGATTCTCACAGGGCATGTGTATATATGTATA
GTGTAGCGGTTAGCGCACTGCGCTACGAACCCAGTGACCCGAGTTCGATTCCCGCTCATG
GCCAACACCACTGACGATTATCTGAACCGGTCCTGGGCCTCCCCTAGGTTCACTCAGACT
CAAATGAGTACTTGGTGCGGTGTGTAAAAACATCGTCGCTGGGGAGACAAAGGTGGTTGG
GCGTGGTGCTGGCCACCCACCACCTCGTGTGCCGTGCCGGCCTTCATCTGTGCTCATGAA
CAGCACTTGCCCCAACATTGTTAAGGCTATACGGGGGGATCTTTGTCTTTGTGTTGGCGA
AGGTGGTGCGGCGCACGGCGCACCTGGTGGCTGAGTGGCAGTGCGTGGGGTTCTGCCACG
GAGTGCTCAACACGGACAACATGAGCATCTTGGGCCTCACCATCGACTATGGCCCCTTCG
GCTTTATGGACCGGTAATTGCTGTCCCATGCCACCGAGCTATCGAAATCTTCCCATCGTC
CCCAGAACCAGCACCGTCCTGGCTGAGCGGTGTTTCTCCGTGGCTTCAACGCTTGTCTGG
AACTCTTCTCACCACTGCTGCACCTATGCAGCGGCATCCAAACAGCATCATTCACCTTCA
AGCAGCAGCTCAGGCATCTCACCTGTTCAGGGCCTTACCTGTCCAGGCTCTCAACTGTCC
AGGGCCTCGCGCATCCAGGCTCTCAACTGACCAGGATCTCACCCGTTCATACTCTCACCC
GTCAAGGCCCTTACCTGTCCAGGCTCTCACCTGTCCAGGGCCTCGCGCATCCAGGCTCTC
AACTGACCAGGATCTCACCCGTCAAGGCCCTTACCTGTGCAGGCCCTCACTTGTCTAGGC
CTTCACCAGTCCACGCTCTCAACTGTCCAGGCCCTCACATGTCCAGGTTCTCAAATGTCC
AGGCTCTCACCTGTTTTTATTAAGAGCCTGTGTTGGATTTCCGACTTGGCTACGCTTCTG
CGTAGAGTTTGTATGTTTCCCCCTGTTCTGCAAGGGTTTCCTCTGAGTTTTCTGGTTTCC
CCCATCGCGAAAACAAAACGCAAACATCCTAATGCTGATAAATCACCTGCAAAATATGTA
CCAGCAGTGTACCCCGACTGCAAAAACTTGGCAGGATCCTCATGAAAAAAGTATAGAGAC
TCGATGAGACATTCTTGGGTCAACAAGCAGAGTCATGAAAATAGCAATGGTCATTATTAT
TTACATCGGGCACAATCATGGTGATTTGTGTTGATGGAGCCACCCTCCTTCACGCTGGGC
GTTTCGCTTCACACGCGATCGGTGACTCACAAACTCATCTCTACGCATTTGAAAGGGCAC
CCCGAGTGGCAGCCGTCCCTGCGGGCAAAATGTTACTTAGCACTGGCTTGCTATTGGGCG
TTAGTCTGCGAGGAGGGGGCGGCGATTGCTACTTTGCGTGTGATCCCAATTGAATAATTG
GCAGGTAAAATTGTACGATTTGGCAAACGTGTAACGTGATGCCGGCTGACAATGGCCTCG
TCGTTTCGAACGTCACGGGACCGCTTAACTCCTGCCGTGAAGCAGACGGTGCCCAGGTCG
CATTTTTTCCGCGGTCAATCCCCACCGCAGCGATCACCAGGGCAGTCCGCCGGGCTCGAA
ACGCGAACCTCCGGTGACCTCTGCGGCATTGAACGCCCTACCACTGGGCGATGTCACCGC
AGCTGCTGCCGAGTCGAGTAATTCGCCGCTCCCTCTCGCCCTCGTACGCAGGTTCGACCC
TCACTACGTGTGTAACGGCTCGGACGAAGGCGGCCGCTACGCCTATGATCAGCAGCCGGA
GATGTGCCGCTGGAACCTGGAGAAGTTGGCGGAGGCGCTGGCACCCACGCTGCCCACCGA
GCGGAGCCGGCCGGTGCTGGACGAGTAC
Chart Advanced